RNA–Protein interactions for RNA: ENST00000624931.1

PCF11-207, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

Gene PCF11, Length 1,720 nt, Biotype TEC, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-207ENST00000624931 C2orf48Q96LS8 159 aa12.12□□□□□ -0.47
PCF11-207ENST00000624931 COX17Q14061 63 aa12.11□□□□□ -0.47
PCF11-207ENST00000624931 ATP5EP2Q5VTU8 51 aa12.11□□□□□ -0.47
PCF11-207ENST00000624931 CCKP06307 115 aa12.1□□□□□ -0.47
PCF11-207ENST00000624931 DNHD1Q96M86 4753 aa12.1□□□□□ -0.47
PCF11-207ENST00000624931 DAD1P61803 113 aa12.09□□□□□ -0.47
PCF11-207ENST00000624931 TMEM256-PLSCR3K7ERE1 68 aa12.08□□□□□ -0.47
PCF11-207ENST00000624931 LINC00846Q9NV44 126 aa12.08□□□□□ -0.47
PCF11-207ENST00000624931 RPS28P62857 69 aaKnown RBP12.08□□□□□ -0.48
PCF11-207ENST00000624931 MUC7Q8TAX7 377 aa12.08□□□□□ -0.48
PCF11-207ENST00000624931 SPART-AS1P0CW21 52 aa12.07□□□□□ -0.48
PCF11-207ENST00000624931 SERP2Q8N6R1 65 aa12.07□□□□□ -0.48
PCF11-207ENST00000624931 A0A0J9YWU9 116 aa12.06□□□□□ -0.48
PCF11-207ENST00000624931 TM2D3Q9BRN9 247 aa12.06□□□□□ -0.48
PCF11-207ENST00000624931 HTN3P15516 51 aa12.05□□□□□ -0.48
PCF11-207ENST00000624931 KRTAP21-3Q3LHN1 58 aa12.05□□□□□ -0.48
PCF11-207ENST00000624931 J3KT08 172 aa12.04□□□□□ -0.48
PCF11-207ENST00000624931 NCR3O14931 201 aa12.04□□□□□ -0.48
PCF11-207ENST00000624931 C9orf129Q5T035 196 aaKnown RBP12.04□□□□□ -0.48
PCF11-207ENST00000624931 Q8N814 137 aa12.04□□□□□ -0.48
PCF11-207ENST00000624931 C11orf68Q9H3H3 251 aaKnown RBP12.03□□□□□ -0.48
PCF11-207ENST00000624931 TRBV10-3A0A0K0K1G6 114 aa12.03□□□□□ -0.48
PCF11-207ENST00000624931 H3BQ85 93 aa12.03□□□□□ -0.48
PCF11-207ENST00000624931 IGKV3D-7A0A0C4DH55 119 aa12.02□□□□□ -0.49
PCF11-207ENST00000624931 GYPEP15421 78 aa12.02□□□□□ -0.49
PCF11-207ENST00000624931 XCL1P47992 114 aa12.02□□□□□ -0.49
PCF11-207ENST00000624931 CFAP161Q6P656 301 aa12.02□□□□□ -0.49
PCF11-207ENST00000624931 PRO0255Q9UI72 69 aa12.02□□□□□ -0.49
PCF11-207ENST00000624931 TMEM258P61165 79 aa12.01□□□□□ -0.49
PCF11-207ENST00000624931 CD164L2Q6UWJ8 174 aa12.01□□□□□ -0.49
PCF11-207ENST00000624931 HUWE1Q7Z6Z7 4374 aaKnown RBP12.01□□□□□ -0.49
PCF11-207ENST00000624931 hADV29S1A0JD25 119 aa12□□□□□ -0.49
PCF11-207ENST00000624931 SLPIP03973 132 aa12□□□□□ -0.49
PCF11-207ENST00000624931 NANOS2P60321 138 aaKnown RBP12□□□□□ -0.49
PCF11-207ENST00000624931 LYPD5Q6UWN5 251 aa12□□□□□ -0.49
PCF11-207ENST00000624931 USP17L23D6RBM5 183 aa11.99□□□□□ -0.49
PCF11-207ENST00000624931 Q6ZTC4 211 aa11.99□□□□□ -0.49
PCF11-207ENST00000624931 A0A096LPF7 62 aa11.98□□□□□ -0.49
PCF11-207ENST00000624931 BCE1O60756 84 aa11.97□□□□□ -0.49
PCF11-207ENST00000624931 KIAA0087Q14695 138 aa11.97□□□□□ -0.49
PCF11-207ENST00000624931 UBL5Q9BZL1 73 aa11.96□□□□□ -0.49
PCF11-207ENST00000624931 UPK3BQ9BT76 320 aa11.95□□□□□ -0.5
PCF11-207ENST00000624931 C11orf45Q8TAV5 145 aa11.94□□□□□ -0.5
PCF11-207ENST00000624931 DNAH9Q9NYC9 4486 aa11.94□□□□□ -0.5
PCF11-207ENST00000624931 NDUFC2-KCTD14E9PQ53 114 aa11.94□□□□□ -0.5
PCF11-207ENST00000624931 B9D2Q9BPU9 175 aa11.94□□□□□ -0.5
PCF11-207ENST00000624931 PDE6GP18545 87 aa11.93□□□□□ -0.5
PCF11-207ENST00000624931 LINC00575Q6W349 94 aa11.92□□□□□ -0.5
PCF11-207ENST00000624931 CHCHD10Q8WYQ3 142 aaPredicted RBP11.92□□□□□ -0.5
PCF11-207ENST00000624931 LOC110117498A0A087WWA1 95 aa11.91□□□□□ -0.5
PCF11-207ENST00000624931 ZNF561-AS1K7EIQ3 104 aa11.91□□□□□ -0.5
PCF11-207ENST00000624931 GHRHP01286 108 aa11.91□□□□□ -0.5
PCF11-207ENST00000624931 LINC00269Q8N2A0 174 aa11.9□□□□□ -0.5
PCF11-207ENST00000624931 A0A087WVE0 104 aa11.89□□□□□ -0.51
PCF11-207ENST00000624931 RBM3P98179 157 aaKnown RBP11.89□□□□□ -0.51
PCF11-207ENST00000624931 REG3AQ06141 175 aa11.89□□□□□ -0.51
PCF11-207ENST00000624931 C6orf99Q4VX62 202 aa11.89□□□□□ -0.51
PCF11-207ENST00000624931 MEGF8Q7Z7M0 2845 aa11.88□□□□□ -0.51
PCF11-207ENST00000624931 DEFB131BA0A096LNP1 70 aa11.88□□□□□ -0.51
PCF11-207ENST00000624931 C6orf223Q8N319 242 aa11.88□□□□□ -0.51
PCF11-207ENST00000624931 CLPSL2Q6UWE3 100 aa11.87□□□□□ -0.51
PCF11-207ENST00000624931 ANGP03950 147 aaKnown RBP11.86□□□□□ -0.51
PCF11-207ENST00000624931 PRR3P79522 188 aaKnown RBP11.86□□□□□ -0.51
PCF11-207ENST00000624931 DPH3Q96FX2 82 aa11.86□□□□□ -0.51
PCF11-207ENST00000624931 COL7A1Q02388 2944 aa11.86□□□□□ -0.51
PCF11-207ENST00000624931 Q6ZQT0 140 aa11.86□□□□□ -0.51
PCF11-207ENST00000624931 FAM19A5Q7Z5A7 132 aaPredicted RBP11.84□□□□□ -0.51
PCF11-207ENST00000624931 PRKDCP78527 4128 aaKnown RBP11.84□□□□□ -0.51
PCF11-207ENST00000624931 STAB2Q8WWQ8 2551 aa11.84□□□□□ -0.51
PCF11-207ENST00000624931 GVQW2A0A096LPI5 108 aaPredicted RBP11.83□□□□□ -0.52
PCF11-207ENST00000624931 LOC107984640A0A0U1RRK4 108 aa11.83□□□□□ -0.52
PCF11-207ENST00000624931 IGLV6-57P01721 117 aa11.83□□□□□ -0.52
PCF11-207ENST00000624931 ENHOQ6UWT2 76 aa11.83□□□□□ -0.52
PCF11-207ENST00000624931 TRAV10A0A0B4J240 114 aa11.82□□□□□ -0.52
PCF11-207ENST00000624931 SPAG11BQ08648 103 aa11.82□□□□□ -0.52
PCF11-207ENST00000624931 DSCR8Q96T75 97 aa11.82□□□□□ -0.52
PCF11-207ENST00000624931 C5orf47Q569G3 176 aa11.81□□□□□ -0.52
PCF11-207ENST00000624931 Q8N3U1 123 aa11.81□□□□□ -0.52
PCF11-207ENST00000624931 LAMTOR3Q9UHA4 124 aa11.81□□□□□ -0.52
PCF11-207ENST00000624931 LELP1Q5T871 98 aa11.8□□□□□ -0.52
PCF11-207ENST00000624931 TRBV7-6A0A0J9YX20 115 aa11.79□□□□□ -0.52
PCF11-207ENST00000624931 H3BNG1 76 aa11.79□□□□□ -0.52
PCF11-207ENST00000624931 CXCL6P80162 114 aa11.79□□□□□ -0.52
PCF11-207ENST00000624931 FAM19A1Q7Z5A9 133 aa11.79□□□□□ -0.52
PCF11-207ENST00000624931 CYSTM1Q9H1C7 97 aa11.79□□□□□ -0.52
PCF11-207ENST00000624931 TRAV7A0A075B6U4 112 aa11.78□□□□□ -0.52
PCF11-207ENST00000624931 TRAV23DV6A0A075B6W5 121 aa11.78□□□□□ -0.52
PCF11-207ENST00000624931 C9orf116Q5BN46 136 aaPredicted RBP11.78□□□□□ -0.52
PCF11-207ENST00000624931 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.78□□□□□ -0.52
PCF11-207ENST00000624931 IGLV10-54A0A075B6I4 117 aa11.77□□□□□ -0.52
PCF11-207ENST00000624931 UNQ6190/PRO20217Q6UXQ8 127 aa11.77□□□□□ -0.53
PCF11-207ENST00000624931 DIRC1Q969H9 104 aa11.77□□□□□ -0.53
PCF11-207ENST00000624931 PRR34Q9NV39 138 aa11.77□□□□□ -0.53
PCF11-207ENST00000624931 Q8NDZ9 215 aa11.75□□□□□ -0.53
PCF11-207ENST00000624931 LINC01547P58512 204 aaPredicted RBP11.74□□□□□ -0.53
PCF11-207ENST00000624931 ESRGQ1W209 222 aa11.74□□□□□ -0.53
PCF11-207ENST00000624931 Q6ZVQ6 151 aa11.73□□□□□ -0.53
PCF11-207ENST00000624931 C10orf25Q5T742 122 aa11.72□□□□□ -0.53
PCF11-207ENST00000624931 Q6ZQY7 126 aa11.72□□□□□ -0.53
PCF11-207ENST00000624931 WFDC10BQ8IUB3 73 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms