RNA–Protein interactions for RNA: ENST00000621093.4

POLR2J3-221, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene POLR2J3, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-221ENST00000621093 LINC00528Q8N1L1 170 aa6.84□□□□□ -1.31
POLR2J3-221ENST00000621093 LOC105371267A0A1B0GV96 52 aa6.83□□□□□ -1.32
POLR2J3-221ENST00000621093 LINC00587B1AMM8 73 aa6.83□□□□□ -1.32
POLR2J3-221ENST00000621093 EIF4EBP3O60516 100 aaPredicted RBP6.83□□□□□ -1.32
POLR2J3-221ENST00000621093 SOSTDC1Q6X4U4 206 aa6.83□□□□□ -1.32
POLR2J3-221ENST00000621093 KRTAP11-1Q8IUC1 163 aa6.83□□□□□ -1.32
POLR2J3-221ENST00000621093 VAMP8Q9BV40 100 aa6.83□□□□□ -1.32
POLR2J3-221ENST00000621093 C22orf24Q9Y442 160 aa6.83□□□□□ -1.32
POLR2J3-221ENST00000621093 M0QXV9 152 aa6.82□□□□□ -1.32
POLR2J3-221ENST00000621093 VPREB1P12018 145 aa6.82□□□□□ -1.32
POLR2J3-221ENST00000621093 SCGB1D4Q6XE38 83 aa6.82□□□□□ -1.32
POLR2J3-221ENST00000621093 Q8N1X5 172 aa6.82□□□□□ -1.32
POLR2J3-221ENST00000621093 C14orf144Q96I85 54 aa6.82□□□□□ -1.32
POLR2J3-221ENST00000621093 PLA2G2DQ9UNK4 145 aa6.82□□□□□ -1.32
POLR2J3-221ENST00000621093 RYR1P21817 5038 aa6.82□□□□□ -1.32
POLR2J3-221ENST00000621093 HSPG2P98160 4391 aa6.82□□□□□ -1.32
POLR2J3-221ENST00000621093 TIMM17BO60830 172 aa6.81□□□□□ -1.32
POLR2J3-221ENST00000621093 COX8AP10176 69 aa6.81□□□□□ -1.32
POLR2J3-221ENST00000621093 PRR3P79522 188 aaKnown RBP6.81□□□□□ -1.32
POLR2J3-221ENST00000621093 KRTAP4-5Q9BYR2 181 aa6.81□□□□□ -1.32
POLR2J3-221ENST00000621093 IGLV5-37A0A075B6J1 123 aa6.8□□□□□ -1.32
POLR2J3-221ENST00000621093 GAGE10A6NGK3 116 aa6.8□□□□□ -1.32
POLR2J3-221ENST00000621093 Q5VSD8 79 aa6.8□□□□□ -1.32
POLR2J3-221ENST00000621093 BOD1L2Q8IYS8 172 aa6.8□□□□□ -1.32
POLR2J3-221ENST00000621093 KRTAP10-4P60372 401 aaPredicted RBP6.79□□□□□ -1.32
POLR2J3-221ENST00000621093 NKAPP1Q8N9T2 125 aa6.79□□□□□ -1.32
POLR2J3-221ENST00000621093 C7orf33Q8WU49 177 aa6.79□□□□□ -1.32
POLR2J3-221ENST00000621093 LINC00167Q96N53 147 aa6.79□□□□□ -1.32
POLR2J3-221ENST00000621093 LOC107984156A0A0G2JMH3 177 aa6.78□□□□□ -1.32
POLR2J3-221ENST00000621093 RPL37AP8A6NKH3 93 aa6.78□□□□□ -1.32
POLR2J3-221ENST00000621093 FAM229AH3BQW9 127 aa6.78□□□□□ -1.32
POLR2J3-221ENST00000621093 NCR3O14931 201 aa6.78□□□□□ -1.32
POLR2J3-221ENST00000621093 RPL37AP61513 92 aaKnown RBP6.78□□□□□ -1.32
POLR2J3-221ENST00000621093 RPL24P83731 157 aaKnown RBP6.78□□□□□ -1.32
POLR2J3-221ENST00000621093 MRPL55Q7Z7F7 128 aaKnown RBP6.78□□□□□ -1.32
POLR2J3-221ENST00000621093 ARL17AQ8IVW1 177 aa6.78□□□□□ -1.32
POLR2J3-221ENST00000621093 LINC00308Q8TCZ7 52 aa6.78□□□□□ -1.32
POLR2J3-221ENST00000621093 SPANXDQ9BXN6 97 aa6.78□□□□□ -1.32
POLR2J3-221ENST00000621093 SPANXCQ9NY87 97 aa6.78□□□□□ -1.32
POLR2J3-221ENST00000621093 TMEM238C9JI98 176 aa6.77□□□□□ -1.33
POLR2J3-221ENST00000621093 UBE2BP63146 152 aa6.77□□□□□ -1.33
POLR2J3-221ENST00000621093 MIEN1Q9BRT3 115 aa6.77□□□□□ -1.33
POLR2J3-221ENST00000621093 DLEU1O43261 78 aa6.76□□□□□ -1.33
POLR2J3-221ENST00000621093 MUSTN1Q8IVN3 82 aa6.76□□□□□ -1.33
POLR2J3-221ENST00000621093 PSORS1C2Q9UIG4 136 aa6.76□□□□□ -1.33
POLR2J3-221ENST00000621093 IGKV2-28A0A075B6P5 120 aa6.75□□□□□ -1.33
POLR2J3-221ENST00000621093 IGKV2D-28P01615 120 aa6.75□□□□□ -1.33
POLR2J3-221ENST00000621093 LBHQ53QV2 105 aaPredicted RBP6.75□□□□□ -1.33
POLR2J3-221ENST00000621093 SLC25A34Q6PIV7 304 aa6.75□□□□□ -1.33
POLR2J3-221ENST00000621093 M0R378 163 aa6.74□□□□□ -1.33
POLR2J3-221ENST00000621093 PLA2G1BP04054 148 aaKnown RBP6.74□□□□□ -1.33
POLR2J3-221ENST00000621093 HNRNPA3P51991 378 aaKnown RBP6.74□□□□□ -1.33
POLR2J3-221ENST00000621093 C2orf91Q6ZV80 131 aa6.74□□□□□ -1.33
POLR2J3-221ENST00000621093 SPANXB1Q9NS25 103 aaPredicted RBP6.74□□□□□ -1.33
POLR2J3-221ENST00000621093 HERC2O95714 4834 aa6.73□□□□□ -1.33
POLR2J3-221ENST00000621093 IGLV1-50A0A075B6I6 118 aa6.73□□□□□ -1.33
POLR2J3-221ENST00000621093 NDUFC2O95298 119 aa6.73□□□□□ -1.33
POLR2J3-221ENST00000621093 SMIM6P0DI80 62 aa6.73□□□□□ -1.33
POLR2J3-221ENST00000621093 S100A12P80511 92 aa6.73□□□□□ -1.33
POLR2J3-221ENST00000621093 SRSF9Q13242 221 aaKnown RBP eCLIP6.73□□□□□ -1.33
POLR2J3-221ENST00000621093 C1orf137Q5JT78 98 aa6.73□□□□□ -1.33
POLR2J3-221ENST00000621093 FAT1Q14517 4588 aa6.72□□□□□ -1.33
POLR2J3-221ENST00000621093 TRBV10-3A0A0K0K1G6 114 aa6.72□□□□□ -1.33
POLR2J3-221ENST00000621093 IFITM1P13164 125 aa6.72□□□□□ -1.33
POLR2J3-221ENST00000621093 PRO1933Q9H354 126 aa6.72□□□□□ -1.33
POLR2J3-221ENST00000621093 TRBV10-2A0A0K0K1G8 114 aa6.71□□□□□ -1.34
POLR2J3-221ENST00000621093 Q6ZVH6 145 aa6.71□□□□□ -1.34
POLR2J3-221ENST00000621093 HIST1H4GQ99525 98 aa6.71□□□□□ -1.34
POLR2J3-221ENST00000621093 HIGD1BQ9P298 99 aa6.71□□□□□ -1.34
POLR2J3-221ENST00000621093 A4D1N5 150 aa6.69□□□□□ -1.34
POLR2J3-221ENST00000621093 IGLV7-43P04211 117 aa6.69□□□□□ -1.34
POLR2J3-221ENST00000621093 DDTP30046 118 aa6.69□□□□□ -1.34
POLR2J3-221ENST00000621093 LINC00337Q8N6G1 96 aa6.69□□□□□ -1.34
POLR2J3-221ENST00000621093 PPDPFQ9H3Y8 114 aa6.69□□□□□ -1.34
POLR2J3-221ENST00000621093 IGLV6-57P01721 117 aa6.68□□□□□ -1.34
POLR2J3-221ENST00000621093 INAFM2P0DMQ5 153 aa6.68□□□□□ -1.34
POLR2J3-221ENST00000621093 S100A7L2Q5SY68 101 aa6.68□□□□□ -1.34
POLR2J3-221ENST00000621093 REG3GQ6UW15 175 aa6.68□□□□□ -1.34
POLR2J3-221ENST00000621093 OR13C6PQ8NH95 151 aa6.68□□□□□ -1.34
POLR2J3-221ENST00000621093 COPS9Q8WXC6 57 aa6.68□□□□□ -1.34
POLR2J3-221ENST00000621093 C12orf57Q99622 126 aa6.68□□□□□ -1.34
POLR2J3-221ENST00000621093 TMEM126AQ9H061 195 aa6.68□□□□□ -1.34
POLR2J3-221ENST00000621093 UQCR10Q9UDW1 63 aa6.68□□□□□ -1.34
POLR2J3-221ENST00000621093 VPS13BQ7Z7G8 4022 aa6.67□□□□□ -1.34
POLR2J3-221ENST00000621093 PRYO14603 147 aa6.67□□□□□ -1.34
POLR2J3-221ENST00000621093 BCE1O60756 84 aa6.67□□□□□ -1.34
POLR2J3-221ENST00000621093 KCNQ1DNQ9H478 68 aa6.67□□□□□ -1.34
POLR2J3-221ENST00000621093 FAM19A1Q7Z5A9 133 aa6.66□□□□□ -1.34
POLR2J3-221ENST00000621093 LINC00518Q8N0U6 118 aa6.66□□□□□ -1.34
POLR2J3-221ENST00000621093 SRRM2Q9UQ35 2752 aaKnown RBP6.66□□□□□ -1.34
POLR2J3-221ENST00000621093 A6NDN8 102 aa6.65□□□□□ -1.34
POLR2J3-221ENST00000621093 SPRR1AP35321 89 aa6.65□□□□□ -1.34
POLR2J3-221ENST00000621093 PRLHP81277 87 aa6.65□□□□□ -1.34
POLR2J3-221ENST00000621093 TAL2Q16559 108 aa6.65□□□□□ -1.34
POLR2J3-221ENST00000621093 CEND1Q8N111 149 aa6.65□□□□□ -1.34
POLR2J3-221ENST00000621093 TRAV23DV6A0A075B6W5 121 aa6.64□□□□□ -1.35
POLR2J3-221ENST00000621093 KRTAP4-16G5E9R7 235 aaPredicted RBP6.64□□□□□ -1.35
POLR2J3-221ENST00000621093 FXYD2P54710 66 aa6.64□□□□□ -1.35
POLR2J3-221ENST00000621093 KRTAP13-1Q8IUC0 172 aa6.64□□□□□ -1.35
POLR2J3-221ENST00000621093 PKHD1L1Q86WI1 4243 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms