RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 LGALS3P17931 250 aaKnown RBP11.27□□□□□ -0.61
LITAF-220ENST00000620789 LBHQ53QV2 105 aaPredicted RBP11.27□□□□□ -0.61
LITAF-220ENST00000620789 MRPL55Q7Z7F7 128 aaKnown RBP11.27□□□□□ -0.61
LITAF-220ENST00000620789 HIST3H2BBQ8N257 126 aa11.27□□□□□ -0.61
LITAF-220ENST00000620789 LINC00587B1AMM8 73 aa11.26□□□□□ -0.61
LITAF-220ENST00000620789 S100A6P06703 90 aa11.26□□□□□ -0.61
LITAF-220ENST00000620789 NMUP48645 174 aa11.26□□□□□ -0.61
LITAF-220ENST00000620789 C1orf137Q5JT78 98 aa11.26□□□□□ -0.61
LITAF-220ENST00000620789 C20orf202A1L168 122 aa11.25□□□□□ -0.61
LITAF-220ENST00000620789 LRP1Q07954 4544 aaKnown RBP11.25□□□□□ -0.61
LITAF-220ENST00000620789 KRTAP29-1A8MX34 341 aaPredicted RBP11.24□□□□□ -0.61
LITAF-220ENST00000620789 S100A2P29034 98 aa11.24□□□□□ -0.61
LITAF-220ENST00000620789 NKAPP1Q8N9T2 125 aa11.24□□□□□ -0.61
LITAF-220ENST00000620789 HIST1H2BLQ99880 126 aa11.24□□□□□ -0.61
LITAF-220ENST00000620789 VPREB1P12018 145 aa11.23□□□□□ -0.61
LITAF-220ENST00000620789 SRSF9Q13242 221 aaKnown RBP eCLIP11.23□□□□□ -0.61
LITAF-220ENST00000620789 SPINK6Q6UWN8 80 aa11.23□□□□□ -0.61
LITAF-220ENST00000620789 FAT3Q8TDW7 4589 aa11.22□□□□□ -0.61
LITAF-220ENST00000620789 OXTP01178 125 aa11.22□□□□□ -0.61
LITAF-220ENST00000620789 RPL24P83731 157 aaKnown RBP11.22□□□□□ -0.61
LITAF-220ENST00000620789 MIR7-3HGQ8N6C7 128 aa11.22□□□□□ -0.61
LITAF-220ENST00000620789 LINC00167Q96N53 147 aa11.22□□□□□ -0.61
LITAF-220ENST00000620789 DMBT1Q9UGM3 2413 aaPredicted RBP11.22□□□□□ -0.61
LITAF-220ENST00000620789 IGLV7-43P04211 117 aa11.21□□□□□ -0.61
LITAF-220ENST00000620789 GAGE10A6NGK3 116 aa11.2□□□□□ -0.62
LITAF-220ENST00000620789 Q8NDZ9 215 aa11.2□□□□□ -0.62
LITAF-220ENST00000620789 AKR1D1P51857 326 aa11.19□□□□□ -0.62
LITAF-220ENST00000620789 SNRPEP62304 92 aaKnown RBP11.19□□□□□ -0.62
LITAF-220ENST00000620789 RPL37AP8A6NKH3 93 aa11.18□□□□□ -0.62
LITAF-220ENST00000620789 J3QL48 77 aa11.18□□□□□ -0.62
LITAF-220ENST00000620789 IGKV2D-26A0A0A0MRZ7 120 aa11.17□□□□□ -0.62
LITAF-220ENST00000620789 A0A0J9YXY3 114 aa11.17□□□□□ -0.62
LITAF-220ENST00000620789 C5orf52A6NGY3 159 aa11.16□□□□□ -0.62
LITAF-220ENST00000620789 BOD1L2Q8IYS8 172 aa11.16□□□□□ -0.62
LITAF-220ENST00000620789 ATOH7Q8N100 152 aa11.16□□□□□ -0.62
LITAF-220ENST00000620789 DAND5Q8N907 189 aa11.16□□□□□ -0.62
LITAF-220ENST00000620789 IGKV2-28A0A075B6P5 120 aa11.14□□□□□ -0.63
LITAF-220ENST00000620789 IGKV2D-28P01615 120 aa11.14□□□□□ -0.63
LITAF-220ENST00000620789 REG3GQ6UW15 175 aa11.14□□□□□ -0.63
LITAF-220ENST00000620789 IGLV1-50A0A075B6I6 118 aa11.13□□□□□ -0.63
LITAF-220ENST00000620789 LOC107984156A0A0G2JMH3 177 aa11.13□□□□□ -0.63
LITAF-220ENST00000620789 ZNF815PA8K554 130 aa11.13□□□□□ -0.63
LITAF-220ENST00000620789 ANKRD39Q53RE8 183 aa11.13□□□□□ -0.63
LITAF-220ENST00000620789 ARL17AQ8IVW1 177 aa11.13□□□□□ -0.63
LITAF-220ENST00000620789 DIRC1Q969H9 104 aa11.13□□□□□ -0.63
LITAF-220ENST00000620789 TTTY13Q9BZ97 58 aa11.13□□□□□ -0.63
LITAF-220ENST00000620789 HERC1Q15751 4861 aa11.12□□□□□ -0.63
LITAF-220ENST00000620789 M0R378 163 aa11.12□□□□□ -0.63
LITAF-220ENST00000620789 BCE1O60756 84 aa11.12□□□□□ -0.63
LITAF-220ENST00000620789 ADAMTSL4-AS1Q5T5F5 129 aa11.11□□□□□ -0.63
LITAF-220ENST00000620789 MIEN1Q9BRT3 115 aa11.11□□□□□ -0.63
LITAF-220ENST00000620789 H0Y9J4 135 aa11.1□□□□□ -0.63
LITAF-220ENST00000620789 ZNF861PO60384 105 aa11.1□□□□□ -0.63
LITAF-220ENST00000620789 NCR3O14931 201 aa11.09□□□□□ -0.63
LITAF-220ENST00000620789 TIMM17BO60830 172 aa11.09□□□□□ -0.63
LITAF-220ENST00000620789 LINC01600Q96MT4 127 aa11.09□□□□□ -0.63
LITAF-220ENST00000620789 LITAFQ99732 161 aa11.09□□□□□ -0.63
LITAF-220ENST00000620789 TMEM238C9JI98 176 aa11.07□□□□□ -0.64
LITAF-220ENST00000620789 MT1HL1P0DM35 61 aa11.07□□□□□ -0.64
LITAF-220ENST00000620789 RPL28P46779 137 aaKnown RBP11.07□□□□□ -0.64
LITAF-220ENST00000620789 TMEM126AQ9H061 195 aa11.07□□□□□ -0.64
LITAF-220ENST00000620789 NPC2P61916 151 aa11.06□□□□□ -0.64
LITAF-220ENST00000620789 SOSTDC1Q6X4U4 206 aa11.06□□□□□ -0.64
LITAF-220ENST00000620789 EIF4EBP3O60516 100 aaPredicted RBP11.05□□□□□ -0.64
LITAF-220ENST00000620789 NDUFC2O95298 119 aa11.05□□□□□ -0.64
LITAF-220ENST00000620789 SCGB1D4Q6XE38 83 aa11.05□□□□□ -0.64
LITAF-220ENST00000620789 PCP2Q8IVA1 136 aa11.05□□□□□ -0.64
LITAF-220ENST00000620789 TRBV10-2A0A0K0K1G8 114 aa11.04□□□□□ -0.64
LITAF-220ENST00000620789 HSBP1L1C9JCN9 74 aa11.04□□□□□ -0.64
LITAF-220ENST00000620789 SCGB1D1O95968 90 aa11.04□□□□□ -0.64
LITAF-220ENST00000620789 UBE2AP49459 152 aa11.04□□□□□ -0.64
LITAF-220ENST00000620789 KRTAP13-1Q8IUC0 172 aa11.04□□□□□ -0.64
LITAF-220ENST00000620789 SPANXB1Q9NS25 103 aaPredicted RBP11.04□□□□□ -0.64
LITAF-220ENST00000620789 LINC00308Q8TCZ7 52 aa11.03□□□□□ -0.64
LITAF-220ENST00000620789 TRBV10-3A0A0K0K1G6 114 aa11.02□□□□□ -0.65
LITAF-220ENST00000620789 PRYO14603 147 aa11.02□□□□□ -0.65
LITAF-220ENST00000620789 FAM19A1Q7Z5A9 133 aa11.02□□□□□ -0.65
LITAF-220ENST00000620789 KCNQ1DNQ9H478 68 aa11.01□□□□□ -0.65
LITAF-220ENST00000620789 TNXBP22105 4242 aa11□□□□□ -0.65
LITAF-220ENST00000620789 KRTAP1-4P0C5Y4 121 aa11□□□□□ -0.65
LITAF-220ENST00000620789 PRLHP81277 87 aa11□□□□□ -0.65
LITAF-220ENST00000620789 SPANXDQ9BXN6 97 aa11□□□□□ -0.65
LITAF-220ENST00000620789 SPANXCQ9NY87 97 aa11□□□□□ -0.65
LITAF-220ENST00000620789 DDTP30046 118 aa10.99□□□□□ -0.65
LITAF-220ENST00000620789 KRTAP10-8P60410 259 aa10.99□□□□□ -0.65
LITAF-220ENST00000620789 S100A12P80511 92 aa10.98□□□□□ -0.65
LITAF-220ENST00000620789 SPRR1AP35321 89 aa10.97□□□□□ -0.65
LITAF-220ENST00000620789 S100A7L2Q5SY68 101 aa10.97□□□□□ -0.65
LITAF-220ENST00000620789 IGLV6-57P01721 117 aa10.96□□□□□ -0.65
LITAF-220ENST00000620789 LINC00337Q8N6G1 96 aa10.96□□□□□ -0.65
LITAF-220ENST00000620789 Q6ZVH6 145 aa10.95□□□□□ -0.66
LITAF-220ENST00000620789 COPS9Q8WXC6 57 aa10.95□□□□□ -0.66
LITAF-220ENST00000620789 KRTAP4-16G5E9R7 235 aaPredicted RBP10.94□□□□□ -0.66
LITAF-220ENST00000620789 IFITM1P13164 125 aa10.94□□□□□ -0.66
LITAF-220ENST00000620789 PRR26Q8N8Z3 221 aa10.94□□□□□ -0.66
LITAF-220ENST00000620789 TMA7Q9Y2S6 64 aaKnown RBP10.94□□□□□ -0.66
LITAF-220ENST00000620789 ETDCA0A1B0GVM5 59 aa10.93□□□□□ -0.66
LITAF-220ENST00000620789 PPDPFQ9H3Y8 114 aa10.93□□□□□ -0.66
LITAF-220ENST00000620789 JOSD1Q15040 202 aaPredicted RBP10.92□□□□□ -0.66
LITAF-220ENST00000620789 HIGD2AQ9BW72 106 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms