RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 SPAG11BQ08648 103 aa13.25□□□□□ -0.29
PDLIM3-212ENST00000620787 C5orf47Q569G3 176 aa13.25□□□□□ -0.29
PDLIM3-212ENST00000620787 LAMTOR3Q9UHA4 124 aa13.25□□□□□ -0.29
PDLIM3-212ENST00000620787 DEFB4AO15263 64 aa13.24□□□□□ -0.29
PDLIM3-212ENST00000620787 SPATA3Q8NHX4 192 aa13.24□□□□□ -0.29
PDLIM3-212ENST00000620787 MUC7Q8TAX7 377 aa13.24□□□□□ -0.29
PDLIM3-212ENST00000620787 NDUFC2-KCTD14E9PQ53 114 aa13.23□□□□□ -0.29
PDLIM3-212ENST00000620787 MTORP42345 2549 aa13.23□□□□□ -0.29
PDLIM3-212ENST00000620787 A0A0J9YWU9 116 aa13.23□□□□□ -0.29
PDLIM3-212ENST00000620787 IGHV4-30-4P0DP06 118 aa13.23□□□□□ -0.29
PDLIM3-212ENST00000620787 KRTAP10-3P60369 221 aa13.22□□□□□ -0.29
PDLIM3-212ENST00000620787 LINC00482Q8N8I6 264 aa13.22□□□□□ -0.29
PDLIM3-212ENST00000620787 CYSRT1A8MQ03 144 aa13.22□□□□□ -0.29
PDLIM3-212ENST00000620787 LINC01547P58512 204 aaPredicted RBP13.22□□□□□ -0.29
PDLIM3-212ENST00000620787 ACANP16112 2415 aa13.21□□□□□ -0.29
PDLIM3-212ENST00000620787 Q6ZQY7 126 aa13.21□□□□□ -0.29
PDLIM3-212ENST00000620787 C20orf197Q8N268 126 aa13.21□□□□□ -0.29
PDLIM3-212ENST00000620787 Q6ZVQ6 151 aa13.2□□□□□ -0.3
PDLIM3-212ENST00000620787 BCE1O60756 84 aa13.18□□□□□ -0.3
PDLIM3-212ENST00000620787 DEFB135Q30KP9 77 aa13.18□□□□□ -0.3
PDLIM3-212ENST00000620787 C9orf66Q5T8R8 295 aa13.18□□□□□ -0.3
PDLIM3-212ENST00000620787 DAD1P61803 113 aa13.17□□□□□ -0.3
PDLIM3-212ENST00000620787 TRAV7A0A075B6U4 112 aa13.17□□□□□ -0.3
PDLIM3-212ENST00000620787 HAMPP81172 84 aa13.17□□□□□ -0.3
PDLIM3-212ENST00000620787 CELA1Q9UNI1 258 aa13.16□□□□□ -0.3
PDLIM3-212ENST00000620787 TENM4Q6N022 2769 aa13.15□□□□□ -0.3
PDLIM3-212ENST00000620787 PDZD2O15018 2839 aa13.15□□□□□ -0.3
PDLIM3-212ENST00000620787 GVQW2A0A096LPI5 108 aaPredicted RBP13.15□□□□□ -0.3
PDLIM3-212ENST00000620787 H3BQ85 93 aa13.15□□□□□ -0.3
PDLIM3-212ENST00000620787 PDE6GP18545 87 aa13.15□□□□□ -0.3
PDLIM3-212ENST00000620787 PRR34Q9NV39 138 aa13.15□□□□□ -0.3
PDLIM3-212ENST00000620787 LELP1Q5T871 98 aa13.14□□□□□ -0.31
PDLIM3-212ENST00000620787 Q5XG85 94 aa13.14□□□□□ -0.31
PDLIM3-212ENST00000620787 DIRC1Q969H9 104 aa13.14□□□□□ -0.31
PDLIM3-212ENST00000620787 TRAV10A0A0B4J240 114 aa13.13□□□□□ -0.31
PDLIM3-212ENST00000620787 C6orf48Q9UBA6 75 aa13.13□□□□□ -0.31
PDLIM3-212ENST00000620787 KLK12Q9UKR0 248 aa13.13□□□□□ -0.31
PDLIM3-212ENST00000620787 CXCL6P80162 114 aa13.13□□□□□ -0.31
PDLIM3-212ENST00000620787 FAM236DA0A1B0GTK5 79 aa13.12□□□□□ -0.31
PDLIM3-212ENST00000620787 H7BZZ5 65 aa13.12□□□□□ -0.31
PDLIM3-212ENST00000620787 FAM236CP0DP71 79 aa13.12□□□□□ -0.31
PDLIM3-212ENST00000620787 XAGE1AQ9HD64 81 aa13.12□□□□□ -0.31
PDLIM3-212ENST00000620787 TRBV7-4A0A0J9YYF1 115 aa13.1□□□□□ -0.31
PDLIM3-212ENST00000620787 C4orf26Q17RF5 130 aa13.1□□□□□ -0.31
PDLIM3-212ENST00000620787 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.1□□□□□ -0.31
PDLIM3-212ENST00000620787 Q8NAQ8 132 aa13.1□□□□□ -0.31
PDLIM3-212ENST00000620787 VWFP04275 2813 aa13.1□□□□□ -0.31
PDLIM3-212ENST00000620787 ZNF73O43830 326 aaPredicted RBP13.09□□□□□ -0.31
PDLIM3-212ENST00000620787 COX7BP24311 80 aa13.08□□□□□ -0.32
PDLIM3-212ENST00000620787 HTN3P15516 51 aa13.08□□□□□ -0.32
PDLIM3-212ENST00000620787 ELOF1P60002 83 aaKnown RBP13.08□□□□□ -0.32
PDLIM3-212ENST00000620787 KLKP1Q107X0 134 aa13.08□□□□□ -0.32
PDLIM3-212ENST00000620787 APOC4P55056 127 aa13.07□□□□□ -0.32
PDLIM3-212ENST00000620787 EPM2AB3EWF7 344 aa13.06□□□□□ -0.32
PDLIM3-212ENST00000620787 TRBV7-6A0A0J9YX20 115 aa13.04□□□□□ -0.32
PDLIM3-212ENST00000620787 MIFP14174 115 aa13.04□□□□□ -0.32
PDLIM3-212ENST00000620787 SCXQ7RTU7 201 aa13.04□□□□□ -0.32
PDLIM3-212ENST00000620787 VPREB1P12018 145 aa13.03□□□□□ -0.32
PDLIM3-212ENST00000620787 HRCT1Q6UXD1 115 aa13.03□□□□□ -0.32
PDLIM3-212ENST00000620787 SNURFQ9Y675 71 aa13.03□□□□□ -0.32
PDLIM3-212ENST00000620787 SPART-AS1P0CW21 52 aa13.02□□□□□ -0.32
PDLIM3-212ENST00000620787 RMI2Q96E14 147 aa13.02□□□□□ -0.32
PDLIM3-212ENST00000620787 SERP1Q9Y6X1 66 aa13.02□□□□□ -0.33
PDLIM3-212ENST00000620787 WIPF1O43516 503 aa12.99□□□□□ -0.33
PDLIM3-212ENST00000620787 HIGD2BQ4VC39 106 aa12.99□□□□□ -0.33
PDLIM3-212ENST00000620787 TM2D3Q9BRN9 247 aa12.99□□□□□ -0.33
PDLIM3-212ENST00000620787 HIVEP2P31629 2446 aa12.99□□□□□ -0.33
PDLIM3-212ENST00000620787 ITPR2Q14571 2701 aa12.98□□□□□ -0.33
PDLIM3-212ENST00000620787 CAMK2N2Q96S95 79 aa12.98□□□□□ -0.33
PDLIM3-212ENST00000620787 SMR3AQ99954 134 aa12.98□□□□□ -0.33
PDLIM3-212ENST00000620787 F8WEM9 126 aa12.97□□□□□ -0.33
PDLIM3-212ENST00000620787 M0R378 163 aa12.97□□□□□ -0.33
PDLIM3-212ENST00000620787 LINC00528Q8N1L1 170 aa12.97□□□□□ -0.33
PDLIM3-212ENST00000620787 EGFEM1PQ0D2K5 195 aa12.95□□□□□ -0.34
PDLIM3-212ENST00000620787 KRTAP26-1Q6PEX3 210 aa12.95□□□□□ -0.34
PDLIM3-212ENST00000620787 Q6ZRU5 148 aa12.94□□□□□ -0.34
PDLIM3-212ENST00000620787 WFDC10BQ8IUB3 73 aa12.93□□□□□ -0.34
PDLIM3-212ENST00000620787 HELZ2Q9BYK8 2649 aaKnown RBP12.92□□□□□ -0.34
PDLIM3-212ENST00000620787 NREPQ16612 68 aa12.92□□□□□ -0.34
PDLIM3-212ENST00000620787 C15orf56Q8N910 161 aa12.92□□□□□ -0.34
PDLIM3-212ENST00000620787 HIVEP1P15822 2718 aa12.91□□□□□ -0.34
PDLIM3-212ENST00000620787 BPY2O14599 106 aa12.89□□□□□ -0.35
PDLIM3-212ENST00000620787 NDUFC1O43677 76 aa12.89□□□□□ -0.35
PDLIM3-212ENST00000620787 Q8N9L7 120 aa12.89□□□□□ -0.35
PDLIM3-212ENST00000620787 IGKV4-1P06312 121 aa12.88□□□□□ -0.35
PDLIM3-212ENST00000620787 TENM1Q9UKZ4 2725 aa12.87□□□□□ -0.35
PDLIM3-212ENST00000620787 KMT2BQ9UMN6 2715 aaPredicted RBP12.87□□□□□ -0.35
PDLIM3-212ENST00000620787 J3QKU1 62 aa12.86□□□□□ -0.35
PDLIM3-212ENST00000620787 Q6ZRP5 223 aa12.86□□□□□ -0.35
PDLIM3-212ENST00000620787 TMEM254Q8TBM7 123 aa12.86□□□□□ -0.35
PDLIM3-212ENST00000620787 ERC2-IT1O76042 136 aa12.85□□□□□ -0.35
PDLIM3-212ENST00000620787 UNC79Q9P2D8 2635 aa12.84□□□□□ -0.35
PDLIM3-212ENST00000620787 KPRPQ5T749 579 aaPredicted RBP12.84□□□□□ -0.35
PDLIM3-212ENST00000620787 FP248Q71RG6 208 aaPredicted RBP12.83□□□□□ -0.36
PDLIM3-212ENST00000620787 SMIM26A0A096LP01 95 aa12.82□□□□□ -0.36
PDLIM3-212ENST00000620787 ATP5EP56381 51 aaPredicted RBP12.82□□□□□ -0.36
PDLIM3-212ENST00000620787 OCR1Q9BZK8 76 aa12.81□□□□□ -0.36
PDLIM3-212ENST00000620787 H3BNG1 76 aa12.8□□□□□ -0.36
PDLIM3-212ENST00000620787 C3orf84H3BNL1 204 aa12.8□□□□□ -0.36
PDLIM3-212ENST00000620787 KCNQ1DNQ9H478 68 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms