RNA–Protein interactions for RNA: ENST00000620632.4

TARDBP-223, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-223ENST00000620632 LINC00158P58513 81 aa6.63□□□□□ -1.35
TARDBP-223ENST00000620632 IGKV2D-26A0A0A0MRZ7 120 aa6.62□□□□□ -1.35
TARDBP-223ENST00000620632 MYMXA0A1B0GTQ4 84 aa6.62□□□□□ -1.35
TARDBP-223ENST00000620632 VPREB1P12018 145 aa6.62□□□□□ -1.35
TARDBP-223ENST00000620632 HERV-K104P63124 156 aa6.62□□□□□ -1.35
TARDBP-223ENST00000620632 SRSF9Q13242 221 aaKnown RBP eCLIP6.62□□□□□ -1.35
TARDBP-223ENST00000620632 MEIG1Q5JSS6 88 aa6.62□□□□□ -1.35
TARDBP-223ENST00000620632 C1orf137Q5JT78 98 aa6.62□□□□□ -1.35
TARDBP-223ENST00000620632 MRPL55Q7Z7F7 128 aaKnown RBP6.62□□□□□ -1.35
TARDBP-223ENST00000620632 TP73-AS1Q9UF72 201 aa6.62□□□□□ -1.35
TARDBP-223ENST00000620632 LGALS3P17931 250 aaKnown RBP6.61□□□□□ -1.35
TARDBP-223ENST00000620632 SNRPEP62304 92 aaKnown RBP6.61□□□□□ -1.35
TARDBP-223ENST00000620632 UBE2BP63146 152 aa6.61□□□□□ -1.35
TARDBP-223ENST00000620632 LCE2DQ5TA82 110 aaPredicted RBP6.61□□□□□ -1.35
TARDBP-223ENST00000620632 ATOH7Q8N100 152 aa6.61□□□□□ -1.35
TARDBP-223ENST00000620632 MIR7-3HGQ8N6C7 128 aa6.61□□□□□ -1.35
TARDBP-223ENST00000620632 LINC00167Q96N53 147 aa6.61□□□□□ -1.35
TARDBP-223ENST00000620632 TTTY13Q9BZ97 58 aa6.61□□□□□ -1.35
TARDBP-223ENST00000620632 GAGE10A6NGK3 116 aa6.6□□□□□ -1.35
TARDBP-223ENST00000620632 C5orf52A6NGY3 159 aa6.6□□□□□ -1.35
TARDBP-223ENST00000620632 RPL37AP8A6NKH3 93 aa6.6□□□□□ -1.35
TARDBP-223ENST00000620632 KRTAP29-1A8MX34 341 aaPredicted RBP6.6□□□□□ -1.35
TARDBP-223ENST00000620632 S100A6P06703 90 aa6.6□□□□□ -1.35
TARDBP-223ENST00000620632 DAND5Q8N907 189 aa6.6□□□□□ -1.35
TARDBP-223ENST00000620632 TNXBP22105 4242 aa6.6□□□□□ -1.35
TARDBP-223ENST00000620632 IGLV7-43P04211 117 aa6.59□□□□□ -1.35
TARDBP-223ENST00000620632 S100A2P29034 98 aa6.59□□□□□ -1.35
TARDBP-223ENST00000620632 NMUP48645 174 aa6.59□□□□□ -1.35
TARDBP-223ENST00000620632 ANKRD39Q53RE8 183 aa6.59□□□□□ -1.35
TARDBP-223ENST00000620632 HERC1Q15751 4861 aa6.59□□□□□ -1.35
TARDBP-223ENST00000620632 A0A0J9YXY3 114 aa6.58□□□□□ -1.36
TARDBP-223ENST00000620632 LBHQ53QV2 105 aaPredicted RBP6.58□□□□□ -1.36
TARDBP-223ENST00000620632 SPINK6Q6UWN8 80 aa6.58□□□□□ -1.36
TARDBP-223ENST00000620632 NKAPP1Q8N9T2 125 aa6.58□□□□□ -1.36
TARDBP-223ENST00000620632 C20orf202A1L168 122 aa6.57□□□□□ -1.36
TARDBP-223ENST00000620632 EIF4EBP3O60516 100 aaPredicted RBP6.57□□□□□ -1.36
TARDBP-223ENST00000620632 ADAMTSL4-AS1Q5T5F5 129 aa6.57□□□□□ -1.36
TARDBP-223ENST00000620632 LITAFQ99732 161 aa6.57□□□□□ -1.36
TARDBP-223ENST00000620632 IGKV2-28A0A075B6P5 120 aa6.56□□□□□ -1.36
TARDBP-223ENST00000620632 LINC00587B1AMM8 73 aa6.56□□□□□ -1.36
TARDBP-223ENST00000620632 IGKV2D-28P01615 120 aa6.56□□□□□ -1.36
TARDBP-223ENST00000620632 MT1HL1P0DM35 61 aa6.56□□□□□ -1.36
TARDBP-223ENST00000620632 SOSTDC1Q6X4U4 206 aa6.56□□□□□ -1.36
TARDBP-223ENST00000620632 DMBT1Q9UGM3 2413 aaPredicted RBP6.55□□□□□ -1.36
TARDBP-223ENST00000620632 IGLV1-50A0A075B6I6 118 aa6.55□□□□□ -1.36
TARDBP-223ENST00000620632 LOC107984156A0A0G2JMH3 177 aa6.55□□□□□ -1.36
TARDBP-223ENST00000620632 ZNF815PA8K554 130 aa6.55□□□□□ -1.36
TARDBP-223ENST00000620632 NCR3O14931 201 aa6.55□□□□□ -1.36
TARDBP-223ENST00000620632 OXTP01178 125 aa6.55□□□□□ -1.36
TARDBP-223ENST00000620632 RPL24P83731 157 aaKnown RBP6.55□□□□□ -1.36
TARDBP-223ENST00000620632 ARL17AQ8IVW1 177 aa6.55□□□□□ -1.36
TARDBP-223ENST00000620632 BOD1L2Q8IYS8 172 aa6.55□□□□□ -1.36
TARDBP-223ENST00000620632 TMEM238C9JI98 176 aa6.54□□□□□ -1.36
TARDBP-223ENST00000620632 NPC2P61916 151 aa6.54□□□□□ -1.36
TARDBP-223ENST00000620632 J3QL48 77 aa6.53□□□□□ -1.36
TARDBP-223ENST00000620632 BCE1O60756 84 aa6.53□□□□□ -1.36
TARDBP-223ENST00000620632 PCP2Q8IVA1 136 aa6.53□□□□□ -1.36
TARDBP-223ENST00000620632 H0Y9J4 135 aa6.52□□□□□ -1.37
TARDBP-223ENST00000620632 M0R378 163 aa6.52□□□□□ -1.37
TARDBP-223ENST00000620632 KRTAP13-1Q8IUC0 172 aa6.52□□□□□ -1.37
TARDBP-223ENST00000620632 ZNF861PO60384 105 aa6.51□□□□□ -1.37
TARDBP-223ENST00000620632 TIMM17BO60830 172 aa6.51□□□□□ -1.37
TARDBP-223ENST00000620632 LINC01600Q96MT4 127 aa6.51□□□□□ -1.37
TARDBP-223ENST00000620632 TMEM126AQ9H061 195 aa6.51□□□□□ -1.37
TARDBP-223ENST00000620632 KRTAP1-4P0C5Y4 121 aa6.5□□□□□ -1.37
TARDBP-223ENST00000620632 AKR1D1P51857 326 aa6.5□□□□□ -1.37
TARDBP-223ENST00000620632 REG3GQ6UW15 175 aa6.5□□□□□ -1.37
TARDBP-223ENST00000620632 LINC00308Q8TCZ7 52 aa6.5□□□□□ -1.37
TARDBP-223ENST00000620632 DIRC1Q969H9 104 aa6.5□□□□□ -1.37
TARDBP-223ENST00000620632 TRBV10-3A0A0K0K1G6 114 aa6.49□□□□□ -1.37
TARDBP-223ENST00000620632 NDUFC2O95298 119 aa6.49□□□□□ -1.37
TARDBP-223ENST00000620632 SCGB1D1O95968 90 aa6.49□□□□□ -1.37
TARDBP-223ENST00000620632 PRLHP81277 87 aa6.49□□□□□ -1.37
TARDBP-223ENST00000620632 MIEN1Q9BRT3 115 aa6.49□□□□□ -1.37
TARDBP-223ENST00000620632 TMA7Q9Y2S6 64 aaKnown RBP6.49□□□□□ -1.37
TARDBP-223ENST00000620632 SPANXDQ9BXN6 97 aa6.48□□□□□ -1.37
TARDBP-223ENST00000620632 SPANXB1Q9NS25 103 aaPredicted RBP6.48□□□□□ -1.37
TARDBP-223ENST00000620632 SPANXCQ9NY87 97 aa6.48□□□□□ -1.37
TARDBP-223ENST00000620632 TRBV10-2A0A0K0K1G8 114 aa6.47□□□□□ -1.37
TARDBP-223ENST00000620632 SPRR1AP35321 89 aa6.47□□□□□ -1.37
TARDBP-223ENST00000620632 RPL28P46779 137 aaKnown RBP6.47□□□□□ -1.37
TARDBP-223ENST00000620632 UBE2AP49459 152 aa6.47□□□□□ -1.37
TARDBP-223ENST00000620632 KRTAP10-8P60410 259 aa6.47□□□□□ -1.37
TARDBP-223ENST00000620632 SCGB1D4Q6XE38 83 aa6.47□□□□□ -1.37
TARDBP-223ENST00000620632 FAM19A1Q7Z5A9 133 aa6.47□□□□□ -1.37
TARDBP-223ENST00000620632 KCNQ1DNQ9H478 68 aa6.47□□□□□ -1.37
TARDBP-223ENST00000620632 KRTAP4-16G5E9R7 235 aaPredicted RBP6.46□□□□□ -1.38
TARDBP-223ENST00000620632 PRYO14603 147 aa6.46□□□□□ -1.38
TARDBP-223ENST00000620632 HSBP1L1C9JCN9 74 aa6.45□□□□□ -1.38
TARDBP-223ENST00000620632 IGLV6-57P01721 117 aa6.45□□□□□ -1.38
TARDBP-223ENST00000620632 DDTP30046 118 aa6.45□□□□□ -1.38
TARDBP-223ENST00000620632 PRR26Q8N8Z3 221 aa6.45□□□□□ -1.38
TARDBP-223ENST00000620632 JOSD1Q15040 202 aaPredicted RBP6.44□□□□□ -1.38
TARDBP-223ENST00000620632 MUSTN1Q8IVN3 82 aa6.43□□□□□ -1.38
TARDBP-223ENST00000620632 LINC00337Q8N6G1 96 aa6.43□□□□□ -1.38
TARDBP-223ENST00000620632 ANAPC11Q9NYG5 84 aa6.43□□□□□ -1.38
TARDBP-223ENST00000620632 A0A087X002 238 aa6.42□□□□□ -1.38
TARDBP-223ENST00000620632 COX8AP10176 69 aa6.42□□□□□ -1.38
TARDBP-223ENST00000620632 PYY3Q5JQD4 70 aa6.42□□□□□ -1.38
TARDBP-223ENST00000620632 S100A7L2Q5SY68 101 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms