RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 C9orf116Q5BN46 136 aaPredicted RBP8.84□□□□□ -0.99
SKP2-209ENST00000620197 PRR34Q9NV39 138 aa8.84□□□□□ -0.99
SKP2-209ENST00000620197 C9orf66Q5T8R8 295 aa8.84□□□□□ -0.99
SKP2-209ENST00000620197 CLPSL2Q6UWE3 100 aa8.84□□□□□ -0.99
SKP2-209ENST00000620197 REG3AQ06141 175 aa8.83□□□□□ -1
SKP2-209ENST00000620197 C6orf99Q4VX62 202 aa8.83□□□□□ -1
SKP2-209ENST00000620197 Q5XG85 94 aa8.83□□□□□ -1
SKP2-209ENST00000620197 C10orf25Q5T742 122 aa8.82□□□□□ -1
SKP2-209ENST00000620197 ZNF561-AS1K7EIQ3 104 aa8.82□□□□□ -1
SKP2-209ENST00000620197 BCE1O60756 84 aa8.82□□□□□ -1
SKP2-209ENST00000620197 ENHOQ6UWT2 76 aa8.81□□□□□ -1
SKP2-209ENST00000620197 GHRHP01286 108 aa8.81□□□□□ -1
SKP2-209ENST00000620197 TRAV23DV6A0A075B6W5 121 aa8.8□□□□□ -1
SKP2-209ENST00000620197 SPATA3Q8NHX4 192 aa8.79□□□□□ -1
SKP2-209ENST00000620197 M0R2N4 97 aa8.79□□□□□ -1
SKP2-209ENST00000620197 A0A096LPF7 62 aa8.79□□□□□ -1
SKP2-209ENST00000620197 EPM2AB3EWF7 344 aa8.79□□□□□ -1
SKP2-209ENST00000620197 NDUFC2-KCTD14E9PQ53 114 aa8.79□□□□□ -1
SKP2-209ENST00000620197 Q8NAQ8 132 aa8.79□□□□□ -1
SKP2-209ENST00000620197 UNQ6190/PRO20217Q6UXQ8 127 aa8.78□□□□□ -1
SKP2-209ENST00000620197 H3BQ85 93 aa8.77□□□□□ -1.01
SKP2-209ENST00000620197 DNAH1Q9P2D7 4330 aa8.76□□□□□ -1.01
SKP2-209ENST00000620197 WIPF1O43516 503 aa8.76□□□□□ -1.01
SKP2-209ENST00000620197 ANGP03950 147 aaKnown RBP8.76□□□□□ -1.01
SKP2-209ENST00000620197 C4orf26Q17RF5 130 aa8.76□□□□□ -1.01
SKP2-209ENST00000620197 IGLV10-54A0A075B6I4 117 aa8.76□□□□□ -1.01
SKP2-209ENST00000620197 LELP1Q5T871 98 aa8.76□□□□□ -1.01
SKP2-209ENST00000620197 CELA1Q9UNI1 258 aa8.76□□□□□ -1.01
SKP2-209ENST00000620197 CYSRT1A8MQ03 144 aa8.76□□□□□ -1.01
SKP2-209ENST00000620197 RBM3P98179 157 aaKnown RBP8.76□□□□□ -1.01
SKP2-209ENST00000620197 TRBV7-6A0A0J9YX20 115 aa8.75□□□□□ -1.01
SKP2-209ENST00000620197 TRBV7-4A0A0J9YYF1 115 aa8.75□□□□□ -1.01
SKP2-209ENST00000620197 C1orf43Q9BWL3 253 aa8.75□□□□□ -1.01
SKP2-209ENST00000620197 LINC01547P58512 204 aaPredicted RBP8.74□□□□□ -1.01
SKP2-209ENST00000620197 SPAG11BQ08648 103 aa8.74□□□□□ -1.01
SKP2-209ENST00000620197 KRTAP26-1Q6PEX3 210 aa8.74□□□□□ -1.01
SKP2-209ENST00000620197 UBL5Q9BZL1 73 aa8.74□□□□□ -1.01
SKP2-209ENST00000620197 CXCL6P80162 114 aa8.74□□□□□ -1.01
SKP2-209ENST00000620197 C6orf48Q9UBA6 75 aa8.74□□□□□ -1.01
SKP2-209ENST00000620197 ANK2Q01484 3957 aa8.74□□□□□ -1.01
SKP2-209ENST00000620197 CMYA5Q8N3K9 4069 aa8.73□□□□□ -1.01
SKP2-209ENST00000620197 H7BZZ5 65 aa8.73□□□□□ -1.01
SKP2-209ENST00000620197 C20orf197Q8N268 126 aa8.73□□□□□ -1.01
SKP2-209ENST00000620197 PDE6GP18545 87 aa8.72□□□□□ -1.01
SKP2-209ENST00000620197 Q6ZVQ6 151 aa8.72□□□□□ -1.01
SKP2-209ENST00000620197 ELOF1P60002 83 aaKnown RBP8.72□□□□□ -1.01
SKP2-209ENST00000620197 DNAH3Q8TD57 4116 aa8.72□□□□□ -1.01
SKP2-209ENST00000620197 MIFP14174 115 aa8.71□□□□□ -1.02
SKP2-209ENST00000620197 HIVEP1P15822 2718 aa8.71□□□□□ -1.02
SKP2-209ENST00000620197 DEFB135Q30KP9 77 aa8.71□□□□□ -1.02
SKP2-209ENST00000620197 ITPR2Q14571 2701 aa8.7□□□□□ -1.02
SKP2-209ENST00000620197 TENM1Q9UKZ4 2725 aa8.7□□□□□ -1.02
SKP2-209ENST00000620197 TRAV7A0A075B6U4 112 aa8.7□□□□□ -1.02
SKP2-209ENST00000620197 TRAV10A0A0B4J240 114 aa8.7□□□□□ -1.02
SKP2-209ENST00000620197 KLKP1Q107X0 134 aa8.7□□□□□ -1.02
SKP2-209ENST00000620197 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.7□□□□□ -1.02
SKP2-209ENST00000620197 Q6ZQY7 126 aa8.7□□□□□ -1.02
SKP2-209ENST00000620197 DEFB4AO15263 64 aa8.69□□□□□ -1.02
SKP2-209ENST00000620197 VPREB1P12018 145 aa8.69□□□□□ -1.02
SKP2-209ENST00000620197 TRRAPQ9Y4A5 3859 aa8.69□□□□□ -1.02
SKP2-209ENST00000620197 DAD1P61803 113 aa8.69□□□□□ -1.02
SKP2-209ENST00000620197 APOC4P55056 127 aa8.68□□□□□ -1.02
SKP2-209ENST00000620197 HRCT1Q6UXD1 115 aa8.68□□□□□ -1.02
SKP2-209ENST00000620197 FAM236DA0A1B0GTK5 79 aa8.67□□□□□ -1.02
SKP2-209ENST00000620197 ZNF73O43830 326 aaPredicted RBP8.67□□□□□ -1.02
SKP2-209ENST00000620197 FAM236CP0DP71 79 aa8.67□□□□□ -1.02
SKP2-209ENST00000620197 DIRC1Q969H9 104 aa8.67□□□□□ -1.02
SKP2-209ENST00000620197 LINC00528Q8N1L1 170 aa8.65□□□□□ -1.02
SKP2-209ENST00000620197 KLK12Q9UKR0 248 aa8.65□□□□□ -1.03
SKP2-209ENST00000620197 HECTD1Q9ULT8 2610 aa8.65□□□□□ -1.03
SKP2-209ENST00000620197 H3BNG1 76 aa8.64□□□□□ -1.03
SKP2-209ENST00000620197 LAMTOR3Q9UHA4 124 aa8.64□□□□□ -1.03
SKP2-209ENST00000620197 SPART-AS1P0CW21 52 aa8.64□□□□□ -1.03
SKP2-209ENST00000620197 C15orf56Q8N910 161 aa8.63□□□□□ -1.03
SKP2-209ENST00000620197 SERP1Q9Y6X1 66 aa8.63□□□□□ -1.03
SKP2-209ENST00000620197 OTOGQ6ZRI0 2925 aa8.63□□□□□ -1.03
SKP2-209ENST00000620197 COX7BP24311 80 aa8.63□□□□□ -1.03
SKP2-209ENST00000620197 FASNP49327 2511 aaKnown RBP8.62□□□□□ -1.03
SKP2-209ENST00000620197 HAMPP81172 84 aa8.62□□□□□ -1.03
SKP2-209ENST00000620197 EGFEM1PQ0D2K5 195 aa8.62□□□□□ -1.03
SKP2-209ENST00000620197 SMR3AQ99954 134 aa8.62□□□□□ -1.03
SKP2-209ENST00000620197 RMI2Q96E14 147 aa8.62□□□□□ -1.03
SKP2-209ENST00000620197 XAGE1AQ9HD64 81 aa8.61□□□□□ -1.03
SKP2-209ENST00000620197 SNURFQ9Y675 71 aa8.61□□□□□ -1.03
SKP2-209ENST00000620197 M0R378 163 aa8.6□□□□□ -1.03
SKP2-209ENST00000620197 UNC79Q9P2D8 2635 aa8.6□□□□□ -1.03
SKP2-209ENST00000620197 TM2D3Q9BRN9 247 aa8.6□□□□□ -1.03
SKP2-209ENST00000620197 FP248Q71RG6 208 aaPredicted RBP8.59□□□□□ -1.03
SKP2-209ENST00000620197 ATRQ13535 2644 aa8.59□□□□□ -1.03
SKP2-209ENST00000620197 KMT2BQ9UMN6 2715 aaPredicted RBP8.58□□□□□ -1.04
SKP2-209ENST00000620197 F8WDY8 70 aa8.58□□□□□ -1.04
SKP2-209ENST00000620197 ERC2-IT1O76042 136 aa8.58□□□□□ -1.04
SKP2-209ENST00000620197 Q6ZRU5 148 aa8.58□□□□□ -1.04
SKP2-209ENST00000620197 F8WEM9 126 aa8.57□□□□□ -1.04
SKP2-209ENST00000620197 WFDC10BQ8IUB3 73 aa8.57□□□□□ -1.04
SKP2-209ENST00000620197 SCXQ7RTU7 201 aa8.56□□□□□ -1.04
SKP2-209ENST00000620197 KCNQ1DNQ9H478 68 aa8.56□□□□□ -1.04
SKP2-209ENST00000620197 F8P00451 2351 aa8.56□□□□□ -1.04
SKP2-209ENST00000620197 TEP1Q99973 2627 aaKnown RBP8.56□□□□□ -1.04
SKP2-209ENST00000620197 IGKV4-1P06312 121 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms