RNA–Protein interactions for RNA: ENST00000619449.1

MALAT1-215, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 794 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-215ENST00000619449 NMUP48645 174 aa11.25□□□□□ -0.61
MALAT1-215ENST00000619449 KRTAP11-1Q8IUC1 163 aa11.25□□□□□ -0.61
MALAT1-215ENST00000619449 IGLV5-37A0A075B6J1 123 aa11.24□□□□□ -0.61
MALAT1-215ENST00000619449 C20orf202A1L168 122 aa11.24□□□□□ -0.61
MALAT1-215ENST00000619449 M0QXV9 152 aa11.24□□□□□ -0.61
MALAT1-215ENST00000619449 HNRNPA3P51991 378 aaKnown RBP11.24□□□□□ -0.61
MALAT1-215ENST00000619449 PRR3P79522 188 aaKnown RBP11.24□□□□□ -0.61
MALAT1-215ENST00000619449 C22orf24Q9Y442 160 aa11.24□□□□□ -0.61
MALAT1-215ENST00000619449 MYCBP2O75592 4640 aa11.24□□□□□ -0.61
MALAT1-215ENST00000619449 IGKV2D-26A0A0A0MRZ7 120 aa11.23□□□□□ -0.61
MALAT1-215ENST00000619449 SMIM13P0DJ93 91 aa11.23□□□□□ -0.61
MALAT1-215ENST00000619449 INAFM2P0DMQ5 153 aa11.23□□□□□ -0.61
MALAT1-215ENST00000619449 TP73-AS1Q9UF72 201 aa11.23□□□□□ -0.61
MALAT1-215ENST00000619449 LGALS3P17931 250 aaKnown RBP11.22□□□□□ -0.61
MALAT1-215ENST00000619449 LINC00158P58513 81 aa11.21□□□□□ -0.61
MALAT1-215ENST00000619449 Q8NDZ9 215 aa11.21□□□□□ -0.61
MALAT1-215ENST00000619449 PSORS1C2Q9UIG4 136 aa11.21□□□□□ -0.61
MALAT1-215ENST00000619449 A0A0U1RRA0 63 aa11.2□□□□□ -0.62
MALAT1-215ENST00000619449 LINC00587B1AMM8 73 aa11.2□□□□□ -0.62
MALAT1-215ENST00000619449 AKR1D1P51857 326 aa11.2□□□□□ -0.62
MALAT1-215ENST00000619449 ANKRD39Q53RE8 183 aa11.2□□□□□ -0.62
MALAT1-215ENST00000619449 ATOH7Q8N100 152 aa11.2□□□□□ -0.62
MALAT1-215ENST00000619449 FAT3Q8TDW7 4589 aa11.19□□□□□ -0.62
MALAT1-215ENST00000619449 VPREB1P12018 145 aa11.19□□□□□ -0.62
MALAT1-215ENST00000619449 MEIG1Q5JSS6 88 aa11.19□□□□□ -0.62
MALAT1-215ENST00000619449 MIR7-3HGQ8N6C7 128 aa11.19□□□□□ -0.62
MALAT1-215ENST00000619449 A0A0J9YXY3 114 aa11.18□□□□□ -0.62
MALAT1-215ENST00000619449 LRP1Q07954 4544 aaKnown RBP11.17□□□□□ -0.62
MALAT1-215ENST00000619449 LOC107984156A0A0G2JMH3 177 aa11.17□□□□□ -0.62
MALAT1-215ENST00000619449 MRPL55Q7Z7F7 128 aaKnown RBP11.17□□□□□ -0.62
MALAT1-215ENST00000619449 ARL17AQ8IVW1 177 aa11.17□□□□□ -0.62
MALAT1-215ENST00000619449 TTTY13Q9BZ97 58 aa11.17□□□□□ -0.62
MALAT1-215ENST00000619449 FLG2Q5D862 2391 aaPredicted RBP11.17□□□□□ -0.62
MALAT1-215ENST00000619449 SRSF9Q13242 221 aaKnown RBP eCLIP11.16□□□□□ -0.621e-323■■■■■ 29.5
MALAT1-215ENST00000619449 LBHQ53QV2 105 aaPredicted RBP11.15□□□□□ -0.62
MALAT1-215ENST00000619449 LINC00167Q96N53 147 aa11.15□□□□□ -0.62
MALAT1-215ENST00000619449 LITAFQ99732 161 aa11.15□□□□□ -0.62
MALAT1-215ENST00000619449 ADAMTSL4-AS1Q5T5F5 129 aa11.14□□□□□ -0.63
MALAT1-215ENST00000619449 DAND5Q8N907 189 aa11.13□□□□□ -0.63
MALAT1-215ENST00000619449 ZNF815PA8K554 130 aa11.12□□□□□ -0.63
MALAT1-215ENST00000619449 UBE2BP63146 152 aa11.12□□□□□ -0.63
MALAT1-215ENST00000619449 RPL24P83731 157 aaKnown RBP11.12□□□□□ -0.63
MALAT1-215ENST00000619449 TIMM17BO60830 172 aa11.11□□□□□ -0.63
MALAT1-215ENST00000619449 C1orf137Q5JT78 98 aa11.11□□□□□ -0.63
MALAT1-215ENST00000619449 NKAPP1Q8N9T2 125 aa11.11□□□□□ -0.63
MALAT1-215ENST00000619449 EIF4EBP3O60516 100 aaPredicted RBP11.1□□□□□ -0.63
MALAT1-215ENST00000619449 SOSTDC1Q6X4U4 206 aa11.1□□□□□ -0.63
MALAT1-215ENST00000619449 PCP2Q8IVA1 136 aa11.1□□□□□ -0.63
MALAT1-215ENST00000619449 BOD1L2Q8IYS8 172 aa11.1□□□□□ -0.63
MALAT1-215ENST00000619449 GAGE10A6NGK3 116 aa11.09□□□□□ -0.63
MALAT1-215ENST00000619449 RPL37AP8A6NKH3 93 aa11.09□□□□□ -0.63
MALAT1-215ENST00000619449 IGLV7-43P04211 117 aa11.09□□□□□ -0.63
MALAT1-215ENST00000619449 IGLV1-50A0A075B6I6 118 aa11.08□□□□□ -0.64
MALAT1-215ENST00000619449 SPINK6Q6UWN8 80 aa11.08□□□□□ -0.64
MALAT1-215ENST00000619449 SCGB1D1O95968 90 aa11.07□□□□□ -0.64
MALAT1-215ENST00000619449 M0R378 163 aa11.06□□□□□ -0.64
MALAT1-215ENST00000619449 TMA7Q9Y2S6 64 aaKnown RBP11.06□□□□□ -0.64
MALAT1-215ENST00000619449 KRTAP29-1A8MX34 341 aaPredicted RBP11.05□□□□□ -0.64
MALAT1-215ENST00000619449 JOSD1Q15040 202 aaPredicted RBP11.05□□□□□ -0.64
MALAT1-215ENST00000619449 IGKV2-28A0A075B6P5 120 aa11.04□□□□□ -0.64
MALAT1-215ENST00000619449 NDUFC2O95298 119 aa11.04□□□□□ -0.64
MALAT1-215ENST00000619449 IGKV2D-28P01615 120 aa11.04□□□□□ -0.64
MALAT1-215ENST00000619449 BCE1O60756 84 aa11.03□□□□□ -0.64
MALAT1-215ENST00000619449 LINC00308Q8TCZ7 52 aa11.03□□□□□ -0.64
MALAT1-215ENST00000619449 SPANXDQ9BXN6 97 aa11.03□□□□□ -0.64
MALAT1-215ENST00000619449 SPANXCQ9NY87 97 aa11.03□□□□□ -0.64
MALAT1-215ENST00000619449 TRBV10-2A0A0K0K1G8 114 aa11.02□□□□□ -0.65
MALAT1-215ENST00000619449 HSBP1L1C9JCN9 74 aa11.02□□□□□ -0.65
MALAT1-215ENST00000619449 OXTP01178 125 aa11.02□□□□□ -0.65
MALAT1-215ENST00000619449 KRTAP13-1Q8IUC0 172 aa11.02□□□□□ -0.65
MALAT1-215ENST00000619449 NCR3O14931 201 aa11.01□□□□□ -0.65
MALAT1-215ENST00000619449 NPC2P61916 151 aa11.01□□□□□ -0.65
MALAT1-215ENST00000619449 SCGB1D4Q6XE38 83 aa11.01□□□□□ -0.65
MALAT1-215ENST00000619449 MIEN1Q9BRT3 115 aa11.01□□□□□ -0.65
MALAT1-215ENST00000619449 TNXBP22105 4242 aa11.01□□□□□ -0.65
MALAT1-215ENST00000619449 TMEM238C9JI98 176 aa11□□□□□ -0.65
MALAT1-215ENST00000619449 ZNF861PO60384 105 aa11□□□□□ -0.65
MALAT1-215ENST00000619449 TMEM126AQ9H061 195 aa11□□□□□ -0.65
MALAT1-215ENST00000619449 SPANXB1Q9NS25 103 aaPredicted RBP11□□□□□ -0.65
MALAT1-215ENST00000619449 PPDPFQ9H3Y8 114 aa10.99□□□□□ -0.65
MALAT1-215ENST00000619449 REG3GQ6UW15 175 aa10.98□□□□□ -0.65
MALAT1-215ENST00000619449 KCNQ1DNQ9H478 68 aa10.98□□□□□ -0.65
MALAT1-215ENST00000619449 TRBV10-3A0A0K0K1G6 114 aa10.97□□□□□ -0.65
MALAT1-215ENST00000619449 H0Y9J4 135 aa10.97□□□□□ -0.65
MALAT1-215ENST00000619449 SPRR1AP35321 89 aa10.97□□□□□ -0.65
MALAT1-215ENST00000619449 PYY3Q5JQD4 70 aa10.97□□□□□ -0.65
MALAT1-215ENST00000619449 Q6ZVH6 145 aa10.97□□□□□ -0.65
MALAT1-215ENST00000619449 DIRC1Q969H9 104 aa10.97□□□□□ -0.65
MALAT1-215ENST00000619449 IGLV6-57P01721 117 aa10.96□□□□□ -0.65
MALAT1-215ENST00000619449 MT1HL1P0DM35 61 aa10.96□□□□□ -0.65
MALAT1-215ENST00000619449 COX8AP10176 69 aa10.96□□□□□ -0.65
MALAT1-215ENST00000619449 KRTAP4-16G5E9R7 235 aaPredicted RBP10.95□□□□□ -0.66
MALAT1-215ENST00000619449 PRYO14603 147 aa10.95□□□□□ -0.66
MALAT1-215ENST00000619449 IFITM1P13164 125 aa10.95□□□□□ -0.66
MALAT1-215ENST00000619449 LINC01600Q96MT4 127 aa10.95□□□□□ -0.66
MALAT1-215ENST00000619449 HERC1Q15751 4861 aa10.95□□□□□ -0.66
MALAT1-215ENST00000619449 DLEU1O43261 78 aa10.94□□□□□ -0.66
MALAT1-215ENST00000619449 KRTAP1-4P0C5Y4 121 aa10.93□□□□□ -0.66
MALAT1-215ENST00000619449 DDTP30046 118 aa10.93□□□□□ -0.66
MALAT1-215ENST00000619449 RPL28P46779 137 aaKnown RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms