RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 COX8AP10176 69 aa15.44■□□□□ 0.06
PMS1-220ENST00000618056 SPINK8P0C7L1 97 aa15.43■□□□□ 0.06
PMS1-220ENST00000618056 PHF5AQ7RTV0 110 aaKnown RBP15.42■□□□□ 0.06
PMS1-220ENST00000618056 CTAG1AP78358 180 aa15.41■□□□□ 0.06
PMS1-220ENST00000618056 C9orf129Q5T035 196 aaKnown RBP15.41■□□□□ 0.06
PMS1-220ENST00000618056 M0R143 59 aa15.4■□□□□ 0.06
PMS1-220ENST00000618056 ZNF22P17026 224 aaPredicted RBP15.4■□□□□ 0.06
PMS1-220ENST00000618056 KRTAP7-1Q8IUC3 87 aa15.4■□□□□ 0.06
PMS1-220ENST00000618056 IGLV5-39A0A0G2JS06 123 aa15.39■□□□□ 0.05
PMS1-220ENST00000618056 NMUP48645 174 aa15.39■□□□□ 0.05
PMS1-220ENST00000618056 FAM19A5Q7Z5A7 132 aaPredicted RBP15.39■□□□□ 0.05
PMS1-220ENST00000618056 PSORS1C2Q9UIG4 136 aa15.38■□□□□ 0.05
PMS1-220ENST00000618056 SNHG12Q9BXW3 62 aa15.37■□□□□ 0.05
PMS1-220ENST00000618056 TP73-AS1Q9UF72 201 aa15.37■□□□□ 0.05
PMS1-220ENST00000618056 C11orf86A6NJI1 115 aa15.36■□□□□ 0.05
PMS1-220ENST00000618056 LBHQ53QV2 105 aaPredicted RBP15.36■□□□□ 0.05
PMS1-220ENST00000618056 SPINK6Q6UWN8 80 aa15.36■□□□□ 0.05
PMS1-220ENST00000618056 SRSF9Q13242 221 aaKnown RBP eCLIP15.35■□□□□ 0.05
PMS1-220ENST00000618056 DLEU1O43261 78 aa15.34■□□□□ 0.05
PMS1-220ENST00000618056 BOD1L2Q8IYS8 172 aa15.34■□□□□ 0.05
PMS1-220ENST00000618056 M0QXV9 152 aa15.33■□□□□ 0.05
PMS1-220ENST00000618056 IGKV2D-26A0A0A0MRZ7 120 aa15.32■□□□□ 0.04
PMS1-220ENST00000618056 HERVK_113P61574 105 aa15.32■□□□□ 0.04
PMS1-220ENST00000618056 XAGE1AQ9HD64 81 aa15.32■□□□□ 0.04
PMS1-220ENST00000618056 PCP2Q8IVA1 136 aa15.31■□□□□ 0.04
PMS1-220ENST00000618056 BATFQ16520 125 aa15.3■□□□□ 0.04
PMS1-220ENST00000618056 TMEM170BQ5T4T1 132 aa15.3■□□□□ 0.04
PMS1-220ENST00000618056 KRTAP11-1Q8IUC1 163 aa15.3■□□□□ 0.04
PMS1-220ENST00000618056 C1orf137Q5JT78 98 aa15.29■□□□□ 0.04
PMS1-220ENST00000618056 C2orf91Q6ZV80 131 aa15.29■□□□□ 0.04
PMS1-220ENST00000618056 MT1HL1P0DM35 61 aa15.28■□□□□ 0.04
PMS1-220ENST00000618056 SERTAD4-AS1Q5TG53 156 aa15.28■□□□□ 0.04
PMS1-220ENST00000618056 TNXBP22105 4242 aa15.28■□□□□ 0.04
PMS1-220ENST00000618056 E9PLD3 99 aa15.27■□□□□ 0.04
PMS1-220ENST00000618056 HINT1P49773 126 aaPredicted RBP15.26■□□□□ 0.03
PMS1-220ENST00000618056 UBE2BP63146 152 aa15.26■□□□□ 0.03
PMS1-220ENST00000618056 SFTA2Q6UW10 78 aa15.25■□□□□ 0.03
PMS1-220ENST00000618056 REG3GQ6UW15 175 aa15.25■□□□□ 0.03
PMS1-220ENST00000618056 LINC01600Q96MT4 127 aa15.25■□□□□ 0.03
PMS1-220ENST00000618056 C22orf24Q9Y442 160 aa15.25■□□□□ 0.03
PMS1-220ENST00000618056 TMEM223A0PJW6 202 aa15.23■□□□□ 0.03
PMS1-220ENST00000618056 IGLV7-43P04211 117 aa15.23■□□□□ 0.03
PMS1-220ENST00000618056 PLA2G2DQ9UNK4 145 aa15.23■□□□□ 0.03
PMS1-220ENST00000618056 TTTY13Q9BZ97 58 aa15.22■□□□□ 0.03
PMS1-220ENST00000618056 COL5A1-AS1Q5SY13 56 aa15.21■□□□□ 0.03
PMS1-220ENST00000618056 HIGD1BQ9P298 99 aa15.21■□□□□ 0.03
PMS1-220ENST00000618056 COX17Q14061 63 aa15.2■□□□□ 0.02
PMS1-220ENST00000618056 ZNF625Q96I27 306 aaPredicted RBP15.2■□□□□ 0.02
PMS1-220ENST00000618056 HSD52Q0P140 79 aa15.2■□□□□ 0.02
PMS1-220ENST00000618056 ERG28Q9UKR5 140 aa15.2■□□□□ 0.02
PMS1-220ENST00000618056 MYMXA0A1B0GTQ4 84 aa15.19■□□□□ 0.02
PMS1-220ENST00000618056 PFN2P35080 140 aa15.19■□□□□ 0.02
PMS1-220ENST00000618056 MRPL55Q7Z7F7 128 aaKnown RBP15.19■□□□□ 0.02
PMS1-220ENST00000618056 BVES-AS1Q5T3Y7 98 aa15.18■□□□□ 0.02
PMS1-220ENST00000618056 IGLV5-37A0A075B6J1 123 aa15.17■□□□□ 0.02
PMS1-220ENST00000618056 ZNF815PA8K554 130 aa15.15■□□□□ 0.02
PMS1-220ENST00000618056 LEPROTO15243 131 aa15.15■□□□□ 0.02
PMS1-220ENST00000618056 DIRC1Q969H9 104 aa15.15■□□□□ 0.02
PMS1-220ENST00000618056 LGALS3P17931 250 aaKnown RBP15.14■□□□□ 0.01
PMS1-220ENST00000618056 PLEKHB2Q96CS7 222 aa15.14■□□□□ 0.01
PMS1-220ENST00000618056 A0A1B0GV90 55 aa15.13■□□□□ 0.01
PMS1-220ENST00000618056 J3QQQ9 107 aa15.13■□□□□ 0.01
PMS1-220ENST00000618056 SND1-IT1Q9HBX3 110 aa15.13■□□□□ 0.01
PMS1-220ENST00000618056 LINC00167Q96N53 147 aa15.12■□□□□ 0.01
PMS1-220ENST00000618056 HMCN2Q8NDA2 5059 aa15.12■□□□□ 0.01
PMS1-220ENST00000618056 H0Y9J4 135 aa15.11■□□□□ 0.01
PMS1-220ENST00000618056 TSPEAR-AS2P59090 65 aa15.11■□□□□ 0.01
PMS1-220ENST00000618056 KRTAP10-8P60410 259 aa15.11■□□□□ 0.01
PMS1-220ENST00000618056 NKAPP1Q8N9T2 125 aa15.11■□□□□ 0.01
PMS1-220ENST00000618056 TAL2Q16559 108 aa15.09■□□□□ 0.01
PMS1-220ENST00000618056 SCGB1D4Q6XE38 83 aa15.09■□□□□ 0.01
PMS1-220ENST00000618056 VPREB1P12018 145 aa15.07■□□□□ 0
PMS1-220ENST00000618056 A6NDN8 102 aa15.06■□□□□ 0
PMS1-220ENST00000618056 RPL37AP8A6NKH3 93 aa15.06■□□□□ 0
PMS1-220ENST00000618056 LINC00158P58513 81 aa15.06■□□□□ 0
PMS1-220ENST00000618056 HERV-K104P63124 156 aa15.06■□□□□ 0
PMS1-220ENST00000618056 GAGE10A6NGK3 116 aa15.05■□□□□ -0
PMS1-220ENST00000618056 ZNF861PO60384 105 aa15.05■□□□□ -0
PMS1-220ENST00000618056 RPL24P83731 157 aaKnown RBP15.05■□□□□ -0
PMS1-220ENST00000618056 HIST1H4GQ99525 98 aa15.05■□□□□ -0
PMS1-220ENST00000618056 CEND1Q8N111 149 aa15.04■□□□□ -0
PMS1-220ENST00000618056 NDUFA12Q9UI09 145 aa15.04■□□□□ -0
PMS1-220ENST00000618056 BCE1O60756 84 aa15.03■□□□□ -0
PMS1-220ENST00000618056 SMIM13P0DJ93 91 aa15.01□□□□□ -0.01
PMS1-220ENST00000618056 Q8NDZ9 215 aa15.01□□□□□ -0.01
PMS1-220ENST00000618056 A0A0U1RRA0 63 aa15□□□□□ -0.01
PMS1-220ENST00000618056 MEIG1Q5JSS6 88 aa15□□□□□ -0.01
PMS1-220ENST00000618056 KRTAP1-4P0C5Y4 121 aa14.99□□□□□ -0.01
PMS1-220ENST00000618056 FXYD2P54710 66 aa14.99□□□□□ -0.01
PMS1-220ENST00000618056 SPANXB1Q9NS25 103 aaPredicted RBP14.99□□□□□ -0.01
PMS1-220ENST00000618056 IGLV1-50A0A075B6I6 118 aa14.98□□□□□ -0.01
PMS1-220ENST00000618056 RPL28P46779 137 aaKnown RBP14.98□□□□□ -0.01
PMS1-220ENST00000618056 IGKV2-28A0A075B6P5 120 aa14.97□□□□□ -0.01
PMS1-220ENST00000618056 TAX1BP3O14907 124 aa14.97□□□□□ -0.01
PMS1-220ENST00000618056 IGKV2D-28P01615 120 aa14.97□□□□□ -0.01
PMS1-220ENST00000618056 MIR7-3HGQ8N6C7 128 aa14.96□□□□□ -0.01
PMS1-220ENST00000618056 TMEM238C9JI98 176 aa14.95□□□□□ -0.02
PMS1-220ENST00000618056 A0A0J9YXY3 114 aa14.94□□□□□ -0.02
PMS1-220ENST00000618056 KRTAP13-1Q8IUC0 172 aa14.94□□□□□ -0.02
PMS1-220ENST00000618056 PRR26Q8N8Z3 221 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms