RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 STAB2Q8WWQ8 2551 aa11.53□□□□□ -0.56
PCDHGC3-205ENST00000617641 CAMK2N2Q96S95 79 aa11.52□□□□□ -0.57
PCDHGC3-205ENST00000617641 M0QXV9 152 aa11.51□□□□□ -0.57
PCDHGC3-205ENST00000617641 NDUFC2O95298 119 aa11.51□□□□□ -0.57
PCDHGC3-205ENST00000617641 FAM218AQ96MZ4 157 aa11.51□□□□□ -0.57
PCDHGC3-205ENST00000617641 CARD19Q96LW7 228 aa11.51□□□□□ -0.57
PCDHGC3-205ENST00000617641 DNAH1Q9P2D7 4330 aa11.49□□□□□ -0.57
PCDHGC3-205ENST00000617641 NCR3O14931 201 aa11.49□□□□□ -0.57
PCDHGC3-205ENST00000617641 C5orf47Q569G3 176 aa11.49□□□□□ -0.57
PCDHGC3-205ENST00000617641 Q6ZRU5 148 aa11.49□□□□□ -0.57
PCDHGC3-205ENST00000617641 MUC7Q8TAX7 377 aa11.49□□□□□ -0.57
PCDHGC3-205ENST00000617641 MT-ATP8P03928 68 aa11.48□□□□□ -0.57
PCDHGC3-205ENST00000617641 PPDPFLQ8WWR9 84 aa11.48□□□□□ -0.57
PCDHGC3-205ENST00000617641 UPK3BQ9BT76 320 aa11.48□□□□□ -0.57
PCDHGC3-205ENST00000617641 CDIP1Q9H305 208 aa11.48□□□□□ -0.57
PCDHGC3-205ENST00000617641 C2orf48Q96LS8 159 aa11.47□□□□□ -0.57
PCDHGC3-205ENST00000617641 LINC01600Q96MT4 127 aa11.47□□□□□ -0.57
PCDHGC3-205ENST00000617641 H3BT86 120 aa11.46□□□□□ -0.57
PCDHGC3-205ENST00000617641 XAGE1AQ9HD64 81 aa11.46□□□□□ -0.57
PCDHGC3-205ENST00000617641 CASC10Q5T4H9 136 aa11.46□□□□□ -0.58
PCDHGC3-205ENST00000617641 TRACP01848 142 aa11.44□□□□□ -0.58
PCDHGC3-205ENST00000617641 A0A087WYN8 130 aa11.43□□□□□ -0.58
PCDHGC3-205ENST00000617641 XGP55808 180 aa11.43□□□□□ -0.58
PCDHGC3-205ENST00000617641 TMEM126AQ9H061 195 aa11.43□□□□□ -0.58
PCDHGC3-205ENST00000617641 DYNC2H1Q8NCM8 4307 aaKnown RBP11.43□□□□□ -0.58
PCDHGC3-205ENST00000617641 H0YGX0 51 aa11.42□□□□□ -0.58
PCDHGC3-205ENST00000617641 NHLRC4P0CG21 123 aaPredicted RBP11.42□□□□□ -0.58
PCDHGC3-205ENST00000617641 APLNQ9ULZ1 77 aa11.42□□□□□ -0.58
PCDHGC3-205ENST00000617641 LYSTQ99698 3801 aa11.42□□□□□ -0.58
PCDHGC3-205ENST00000617641 TEX49A0A1B0GTD5 131 aa11.42□□□□□ -0.58
PCDHGC3-205ENST00000617641 SYCNQ0VAF6 134 aa11.41□□□□□ -0.58
PCDHGC3-205ENST00000617641 S100A7L2Q5SY68 101 aa11.41□□□□□ -0.58
PCDHGC3-205ENST00000617641 RPL18AQ02543 176 aaKnown RBP11.41□□□□□ -0.58
PCDHGC3-205ENST00000617641 USP17L23D6RBM5 183 aa11.4□□□□□ -0.58
PCDHGC3-205ENST00000617641 RMI2Q96E14 147 aa11.4□□□□□ -0.58
PCDHGC3-205ENST00000617641 DNHD1Q96M86 4753 aa11.4□□□□□ -0.58
PCDHGC3-205ENST00000617641 NDUFC2-KCTD14E9PQ53 114 aa11.4□□□□□ -0.59
PCDHGC3-205ENST00000617641 PRKDCP78527 4128 aaKnown RBP11.39□□□□□ -0.59
PCDHGC3-205ENST00000617641 F8WDY8 70 aa11.39□□□□□ -0.59
PCDHGC3-205ENST00000617641 GAGE2EQ4V326 116 aa11.38□□□□□ -0.59
PCDHGC3-205ENST00000617641 UBE2DNLQ8IWF7 75 aa11.38□□□□□ -0.59
PCDHGC3-205ENST00000617641 KRTAP1-5Q9BYS1 174 aa11.38□□□□□ -0.59
PCDHGC3-205ENST00000617641 GAGE2DQ9UEU5 116 aa11.38□□□□□ -0.59
PCDHGC3-205ENST00000617641 CCDC179H3BU77 68 aa11.38□□□□□ -0.59
PCDHGC3-205ENST00000617641 BAALC-AS2P0C853 105 aa11.38□□□□□ -0.59
PCDHGC3-205ENST00000617641 LECT2O14960 151 aa11.37□□□□□ -0.59
PCDHGC3-205ENST00000617641 Q6ZRP5 223 aa11.37□□□□□ -0.59
PCDHGC3-205ENST00000617641 CSMD3Q7Z407 3707 aa11.37□□□□□ -0.59
PCDHGC3-205ENST00000617641 SLPIP03973 132 aa11.36□□□□□ -0.59
PCDHGC3-205ENST00000617641 DNAL4O96015 105 aa11.36□□□□□ -0.59
PCDHGC3-205ENST00000617641 IGLV6-57P01721 117 aa11.36□□□□□ -0.59
PCDHGC3-205ENST00000617641 C6orf99Q4VX62 202 aa11.36□□□□□ -0.59
PCDHGC3-205ENST00000617641 VPREB1P12018 145 aa11.35□□□□□ -0.59
PCDHGC3-205ENST00000617641 C22orf24Q9Y442 160 aa11.35□□□□□ -0.59
PCDHGC3-205ENST00000617641 TRBV10-3A0A0K0K1G6 114 aa11.34□□□□□ -0.59
PCDHGC3-205ENST00000617641 NDUFV3P56181 108 aaKnown RBP11.33□□□□□ -0.6
PCDHGC3-205ENST00000617641 MEGF8Q7Z7M0 2845 aa11.33□□□□□ -0.6
PCDHGC3-205ENST00000617641 NUPR2A6NF83 97 aa11.32□□□□□ -0.6
PCDHGC3-205ENST00000617641 C9orf129Q5T035 196 aaKnown RBP11.31□□□□□ -0.6
PCDHGC3-205ENST00000617641 PLECQ15149 4684 aaKnown RBP11.3□□□□□ -0.6
PCDHGC3-205ENST00000617641 DNAH7Q8WXX0 4024 aa11.3□□□□□ -0.6
PCDHGC3-205ENST00000617641 DNAH10Q8IVF4 4471 aa11.3□□□□□ -0.6
PCDHGC3-205ENST00000617641 TRAV23DV6A0A075B6W5 121 aa11.29□□□□□ -0.6
PCDHGC3-205ENST00000617641 Q8N814 137 aa11.29□□□□□ -0.6
PCDHGC3-205ENST00000617641 TENM2Q9NT68 2774 aa11.29□□□□□ -0.6
PCDHGC3-205ENST00000617641 M0R378 163 aa11.28□□□□□ -0.6
PCDHGC3-205ENST00000617641 TLX1NBP0CAT3 122 aa11.27□□□□□ -0.6
PCDHGC3-205ENST00000617641 A0A1B0GX51 115 aa11.26□□□□□ -0.61
PCDHGC3-205ENST00000617641 LINC00167Q96N53 147 aa11.26□□□□□ -0.61
PCDHGC3-205ENST00000617641 GAGE2BQ13066 116 aa11.26□□□□□ -0.61
PCDHGC3-205ENST00000617641 TTC32Q5I0X7 151 aa11.26□□□□□ -0.61
PCDHGC3-205ENST00000617641 LINC00575Q6W349 94 aa11.26□□□□□ -0.61
PCDHGC3-205ENST00000617641 ORMDL1Q9P0S3 153 aa11.26□□□□□ -0.61
PCDHGC3-205ENST00000617641 PSCAO43653 123 aa11.25□□□□□ -0.61
PCDHGC3-205ENST00000617641 SERTAD4-AS1Q5TG53 156 aa11.25□□□□□ -0.61
PCDHGC3-205ENST00000617641 DIRC1Q969H9 104 aa11.25□□□□□ -0.61
PCDHGC3-205ENST00000617641 ZNF73O43830 326 aaPredicted RBP11.24□□□□□ -0.61
PCDHGC3-205ENST00000617641 STARD9Q9P2P6 4700 aa11.23□□□□□ -0.61
PCDHGC3-205ENST00000617641 NKAPP1Q8N9T2 125 aa11.22□□□□□ -0.61
PCDHGC3-205ENST00000617641 hADV29S1A0JD25 119 aa11.21□□□□□ -0.62
PCDHGC3-205ENST00000617641 FAM168BA1KXE4 195 aa11.21□□□□□ -0.62
PCDHGC3-205ENST00000617641 SNCGO76070 127 aa11.21□□□□□ -0.62
PCDHGC3-205ENST00000617641 NBDYA0A0U1RRE5 68 aa11.2□□□□□ -0.62
PCDHGC3-205ENST00000617641 Q6Q795 121 aa11.2□□□□□ -0.62
PCDHGC3-205ENST00000617641 LOC107984640A0A0U1RRK4 108 aa11.19□□□□□ -0.62
PCDHGC3-205ENST00000617641 C7orf33Q8WU49 177 aa11.19□□□□□ -0.62
PCDHGC3-205ENST00000617641 COX7BP24311 80 aa11.19□□□□□ -0.62
PCDHGC3-205ENST00000617641 INAFM2P0DMQ5 153 aa11.18□□□□□ -0.62
PCDHGC3-205ENST00000617641 PLA2G2DQ9UNK4 145 aa11.18□□□□□ -0.62
PCDHGC3-205ENST00000617641 VPS13DQ5THJ4 4388 aa11.18□□□□□ -0.62
PCDHGC3-205ENST00000617641 ELOF1P60002 83 aaKnown RBP11.18□□□□□ -0.62
PCDHGC3-205ENST00000617641 OBSCN-AS1Q96MR7 158 aa11.18□□□□□ -0.62
PCDHGC3-205ENST00000617641 KRTAP7-1Q8IUC3 87 aa11.17□□□□□ -0.62
PCDHGC3-205ENST00000617641 C14orf132Q9NPU4 83 aa11.17□□□□□ -0.62
PCDHGC3-205ENST00000617641 FAM240AA0A1B0GVK7 77 aa11.17□□□□□ -0.62
PCDHGC3-205ENST00000617641 TRBV7-6A0A0J9YX20 115 aa11.16□□□□□ -0.62
PCDHGC3-205ENST00000617641 TMEM256-PLSCR3K7ERE1 68 aa11.16□□□□□ -0.62
PCDHGC3-205ENST00000617641 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.15□□□□□ -0.62
PCDHGC3-205ENST00000617641 CNBPP62633 177 aaKnown RBP11.15□□□□□ -0.62
PCDHGC3-205ENST00000617641 Q6ZQY7 126 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms