RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 S100A12P80511 92 aa9.45□□□□□ -0.9
UBXN1-218ENST00000616865 COX17Q14061 63 aa9.45□□□□□ -0.9
UBXN1-218ENST00000616865 SPATA45Q537H7 98 aa9.45□□□□□ -0.9
UBXN1-218ENST00000616865 LINC00474Q9P2X8 69 aa9.45□□□□□ -0.9
UBXN1-218ENST00000616865 A0A096LNI7 61 aa9.44□□□□□ -0.9
UBXN1-218ENST00000616865 SMIM13P0DJ93 91 aa9.44□□□□□ -0.9
UBXN1-218ENST00000616865 PTTG1IPP53801 180 aa9.44□□□□□ -0.9
UBXN1-218ENST00000616865 RPL37AP61513 92 aaKnown RBP9.44□□□□□ -0.9
UBXN1-218ENST00000616865 SCGB1D4Q6XE38 83 aa9.44□□□□□ -0.9
UBXN1-218ENST00000616865 TTTY13Q9BZ97 58 aa9.44□□□□□ -0.9
UBXN1-218ENST00000616865 LOC105371267A0A1B0GV96 52 aa9.43□□□□□ -0.9
UBXN1-218ENST00000616865 Q6ZRP5 223 aa9.43□□□□□ -0.9
UBXN1-218ENST00000616865 PCP2Q8IVA1 136 aa9.43□□□□□ -0.9
UBXN1-218ENST00000616865 A0A0J9YXY3 114 aa9.42□□□□□ -0.9
UBXN1-218ENST00000616865 CHTF8P0CG12 524 aa9.42□□□□□ -0.9
UBXN1-218ENST00000616865 HNRNPA3P51991 378 aaKnown RBP9.42□□□□□ -0.9
UBXN1-218ENST00000616865 SMIM6P0DI80 62 aa9.4□□□□□ -0.9
UBXN1-218ENST00000616865 XAGE1AQ9HD64 81 aa9.4□□□□□ -0.9
UBXN1-218ENST00000616865 COX8AP10176 69 aa9.39□□□□□ -0.91
UBXN1-218ENST00000616865 MIR7-3HGQ8N6C7 128 aa9.39□□□□□ -0.91
UBXN1-218ENST00000616865 SPACA4Q8TDM5 124 aa9.39□□□□□ -0.91
UBXN1-218ENST00000616865 C14orf144Q96I85 54 aa9.39□□□□□ -0.91
UBXN1-218ENST00000616865 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.39□□□□□ -0.91
UBXN1-218ENST00000616865 TMEM238C9JI98 176 aa9.38□□□□□ -0.91
UBXN1-218ENST00000616865 TIMM17BO60830 172 aa9.38□□□□□ -0.91
UBXN1-218ENST00000616865 MIEN1Q9BRT3 115 aa9.38□□□□□ -0.91
UBXN1-218ENST00000616865 SND1-IT1Q9HBX3 110 aa9.38□□□□□ -0.91
UBXN1-218ENST00000616865 PANO1I0J062 215 aa9.37□□□□□ -0.91
UBXN1-218ENST00000616865 SLC25A34Q6PIV7 304 aa9.37□□□□□ -0.91
UBXN1-218ENST00000616865 FAM19A5Q7Z5A7 132 aaPredicted RBP9.36□□□□□ -0.91
UBXN1-218ENST00000616865 BOD1L2Q8IYS8 172 aa9.36□□□□□ -0.91
UBXN1-218ENST00000616865 DAND5Q8N907 189 aa9.36□□□□□ -0.91
UBXN1-218ENST00000616865 A0A087WYN8 130 aa9.35□□□□□ -0.91
UBXN1-218ENST00000616865 DLEU1O43261 78 aa9.35□□□□□ -0.91
UBXN1-218ENST00000616865 MT1HL1P0DM35 61 aa9.35□□□□□ -0.91
UBXN1-218ENST00000616865 C9orf129Q5T035 196 aaKnown RBP9.35□□□□□ -0.91
UBXN1-218ENST00000616865 NPC2P61916 151 aa9.34□□□□□ -0.91
UBXN1-218ENST00000616865 RPL24P83731 157 aaKnown RBP9.34□□□□□ -0.91
UBXN1-218ENST00000616865 COPS9Q8WXC6 57 aa9.34□□□□□ -0.91
UBXN1-218ENST00000616865 SRSF9Q13242 221 aaKnown RBP eCLIP9.33□□□□□ -0.92
UBXN1-218ENST00000616865 ADAMTSL4-AS1Q5T5F5 129 aa9.33□□□□□ -0.92
UBXN1-218ENST00000616865 NKAPP1Q8N9T2 125 aa9.33□□□□□ -0.92
UBXN1-218ENST00000616865 FAM168BA1KXE4 195 aa9.32□□□□□ -0.92
UBXN1-218ENST00000616865 LITAFQ99732 161 aa9.32□□□□□ -0.92
UBXN1-218ENST00000616865 SPANXDQ9BXN6 97 aa9.32□□□□□ -0.92
UBXN1-218ENST00000616865 SPANXCQ9NY87 97 aa9.32□□□□□ -0.92
UBXN1-218ENST00000616865 PLAC8Q9NZF1 115 aa9.32□□□□□ -0.92
UBXN1-218ENST00000616865 A0A1W2PNN7 141 aa9.31□□□□□ -0.92
UBXN1-218ENST00000616865 Q6ZVH6 145 aa9.31□□□□□ -0.92
UBXN1-218ENST00000616865 C12orf57Q99622 126 aa9.31□□□□□ -0.92
UBXN1-218ENST00000616865 TP73-AS1Q9UF72 201 aa9.31□□□□□ -0.92
UBXN1-218ENST00000616865 TNXBP22105 4242 aa9.3□□□□□ -0.92
UBXN1-218ENST00000616865 M0QXV9 152 aa9.3□□□□□ -0.92
UBXN1-218ENST00000616865 LINC00308Q8TCZ7 52 aa9.3□□□□□ -0.92
UBXN1-218ENST00000616865 HIST1H4GQ99525 98 aa9.3□□□□□ -0.92
UBXN1-218ENST00000616865 UQCR10Q9UDW1 63 aa9.3□□□□□ -0.92
UBXN1-218ENST00000616865 LRP2P98164 4655 aa9.3□□□□□ -0.92
UBXN1-218ENST00000616865 IFITM1P13164 125 aa9.29□□□□□ -0.92
UBXN1-218ENST00000616865 LBHQ53QV2 105 aaPredicted RBP9.29□□□□□ -0.92
UBXN1-218ENST00000616865 SPANXB1Q9NS25 103 aaPredicted RBP9.29□□□□□ -0.92
UBXN1-218ENST00000616865 C7orf33Q8WU49 177 aa9.28□□□□□ -0.92
UBXN1-218ENST00000616865 PRO1933Q9H354 126 aa9.28□□□□□ -0.92
UBXN1-218ENST00000616865 C22orf24Q9Y442 160 aa9.28□□□□□ -0.92
UBXN1-218ENST00000616865 RNF213Q63HN8 5207 aa9.27□□□□□ -0.93
UBXN1-218ENST00000616865 UBE2BP63146 152 aa9.27□□□□□ -0.93
UBXN1-218ENST00000616865 HIGD1BQ9P298 99 aa9.27□□□□□ -0.93
UBXN1-218ENST00000616865 LOC107984156A0A0G2JMH3 177 aa9.26□□□□□ -0.93
UBXN1-218ENST00000616865 NCR3O14931 201 aa9.26□□□□□ -0.93
UBXN1-218ENST00000616865 VPREB1P12018 145 aa9.26□□□□□ -0.93
UBXN1-218ENST00000616865 SOSTDC1Q6X4U4 206 aa9.26□□□□□ -0.93
UBXN1-218ENST00000616865 PHF5AQ7RTV0 110 aaKnown RBP9.26□□□□□ -0.93
UBXN1-218ENST00000616865 MUSTN1Q8IVN3 82 aa9.26□□□□□ -0.93
UBXN1-218ENST00000616865 ARL17AQ8IVW1 177 aa9.26□□□□□ -0.93
UBXN1-218ENST00000616865 IGLV5-37A0A075B6J1 123 aa9.25□□□□□ -0.93
UBXN1-218ENST00000616865 GAGE10A6NGK3 116 aa9.25□□□□□ -0.93
UBXN1-218ENST00000616865 MRPL55Q7Z7F7 128 aaKnown RBP9.25□□□□□ -0.93
UBXN1-218ENST00000616865 TSTD3H0UI37 97 aa9.24□□□□□ -0.93
UBXN1-218ENST00000616865 M0R378 163 aa9.24□□□□□ -0.93
UBXN1-218ENST00000616865 NDUFC2O95298 119 aa9.24□□□□□ -0.93
UBXN1-218ENST00000616865 C2orf91Q6ZV80 131 aa9.24□□□□□ -0.93
UBXN1-218ENST00000616865 KRTAP7-1Q8IUC3 87 aa9.24□□□□□ -0.93
UBXN1-218ENST00000616865 LINC00518Q8N0U6 118 aa9.24□□□□□ -0.93
UBXN1-218ENST00000616865 EIF4EBP3O60516 100 aaPredicted RBP9.23□□□□□ -0.93
UBXN1-218ENST00000616865 PRR3P79522 188 aaKnown RBP9.23□□□□□ -0.93
UBXN1-218ENST00000616865 Q8NDZ9 215 aa9.22□□□□□ -0.93
UBXN1-218ENST00000616865 LINC00167Q96N53 147 aa9.22□□□□□ -0.93
UBXN1-218ENST00000616865 PPDPFQ9H3Y8 114 aa9.22□□□□□ -0.93
UBXN1-218ENST00000616865 TRBV10-2A0A0K0K1G8 114 aa9.21□□□□□ -0.94
UBXN1-218ENST00000616865 RPL37AP8A6NKH3 93 aa9.21□□□□□ -0.94
UBXN1-218ENST00000616865 TAL2Q16559 108 aa9.21□□□□□ -0.94
UBXN1-218ENST00000616865 S100A7L2Q5SY68 101 aa9.21□□□□□ -0.94
UBXN1-218ENST00000616865 OR13C6PQ8NH95 151 aa9.2□□□□□ -0.94
UBXN1-218ENST00000616865 IGKV2-28A0A075B6P5 120 aa9.19□□□□□ -0.94
UBXN1-218ENST00000616865 IGKV2D-28P01615 120 aa9.19□□□□□ -0.94
UBXN1-218ENST00000616865 HSD52Q0P140 79 aa9.19□□□□□ -0.94
UBXN1-218ENST00000616865 A4D1N5 150 aa9.18□□□□□ -0.94
UBXN1-218ENST00000616865 DDTP30046 118 aa9.18□□□□□ -0.94
UBXN1-218ENST00000616865 CEND1Q8N111 149 aa9.18□□□□□ -0.94
UBXN1-218ENST00000616865 TMEM238LA0A1B0GVL6 79 aa9.17□□□□□ -0.94
UBXN1-218ENST00000616865 A6NJY4 79 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 120.4 ms