RNA–Protein interactions for RNA: ENST00000615671.1

GABPB1-212, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

Gene GABPB1, Length 6,266 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-212ENST00000615671 KIF25-AS1Q9Y6Z4 181 aa12.82□□□□□ -0.36
GABPB1-212ENST00000615671 Q6ZRP5 223 aa12.81□□□□□ -0.36
GABPB1-212ENST00000615671 DOPEY1Q5JWR5 2465 aa12.81□□□□□ -0.36
GABPB1-212ENST00000615671 SPAG11AQ6PDA7 123 aa12.8□□□□□ -0.36
GABPB1-212ENST00000615671 FAM168BA1KXE4 195 aa12.8□□□□□ -0.36
GABPB1-212ENST00000615671 COX6B2Q6YFQ2 88 aa12.79□□□□□ -0.36
GABPB1-212ENST00000615671 COX8CQ7Z4L0 72 aa12.79□□□□□ -0.36
GABPB1-212ENST00000615671 LINC00476Q8WZB0 136 aa12.79□□□□□ -0.36
GABPB1-212ENST00000615671 C10orf142B7Z368 130 aa12.79□□□□□ -0.36
GABPB1-212ENST00000615671 IGHV3OR16-9A0A0B4J2B5 98 aa12.78□□□□□ -0.36
GABPB1-212ENST00000615671 ATP11AUNQ6ZP68 121 aa12.77□□□□□ -0.37
GABPB1-212ENST00000615671 COL27A1Q8IZC6 1860 aaPredicted RBP12.77□□□□□ -0.37
GABPB1-212ENST00000615671 WWC2-AS2Q96NR7 200 aa12.77□□□□□ -0.37
GABPB1-212ENST00000615671 ACYP2P14621 99 aa12.76□□□□□ -0.37
GABPB1-212ENST00000615671 Q8NBF4 154 aa12.75□□□□□ -0.37
GABPB1-212ENST00000615671 MYO18BQ8IUG5 2567 aa12.75□□□□□ -0.37
GABPB1-212ENST00000615671 CXCL6P80162 114 aa12.75□□□□□ -0.37
GABPB1-212ENST00000615671 FAM218AQ96MZ4 157 aa12.74□□□□□ -0.37
GABPB1-212ENST00000615671 SERTAD4-AS1Q5TG53 156 aa12.74□□□□□ -0.37
GABPB1-212ENST00000615671 IGLV5-39A0A0G2JS06 123 aa12.73□□□□□ -0.37
GABPB1-212ENST00000615671 PTPRBP23467 1997 aa12.73□□□□□ -0.37
GABPB1-212ENST00000615671 C2CD3Q4AC94 2353 aa12.72□□□□□ -0.37
GABPB1-212ENST00000615671 C9orf92A6NGG3 77 aa12.72□□□□□ -0.37
GABPB1-212ENST00000615671 ELOF1P60002 83 aaKnown RBP12.72□□□□□ -0.37
GABPB1-212ENST00000615671 SMR3BP02814 79 aaPredicted RBP12.72□□□□□ -0.37
GABPB1-212ENST00000615671 DNAH10OSP0CZ25 163 aa12.72□□□□□ -0.37
GABPB1-212ENST00000615671 Q8NAQ8 132 aa12.71□□□□□ -0.38
GABPB1-212ENST00000615671 Q6ZRX8 168 aa12.7□□□□□ -0.38
GABPB1-212ENST00000615671 COL4A2P08572 1712 aa12.69□□□□□ -0.38
GABPB1-212ENST00000615671 FAM19A4Q96LR4 140 aa12.68□□□□□ -0.38
GABPB1-212ENST00000615671 TP53AIP1Q9HCN2 124 aa12.66□□□□□ -0.38
GABPB1-212ENST00000615671 BCE1O60756 84 aa12.65□□□□□ -0.38
GABPB1-212ENST00000615671 LRRK2Q5S007 2527 aa12.64□□□□□ -0.39
GABPB1-212ENST00000615671 H3BNG1 76 aa12.64□□□□□ -0.39
GABPB1-212ENST00000615671 KRTAP10-11P60412 298 aa12.63□□□□□ -0.39
GABPB1-212ENST00000615671 DSCR10P59022 87 aa12.59□□□□□ -0.39
GABPB1-212ENST00000615671 SPINT4Q6UDR6 99 aa12.59□□□□□ -0.39
GABPB1-212ENST00000615671 Q6ZQT0 140 aa12.59□□□□□ -0.39
GABPB1-212ENST00000615671 JMJD1CQ15652 2540 aa12.58□□□□□ -0.4
GABPB1-212ENST00000615671 APLNQ9ULZ1 77 aa12.57□□□□□ -0.4
GABPB1-212ENST00000615671 EP400Q96L91 3159 aa12.56□□□□□ -0.4
GABPB1-212ENST00000615671 GVQW2A0A096LPI5 108 aaPredicted RBP12.56□□□□□ -0.4
GABPB1-212ENST00000615671 CDIP1Q9H305 208 aa12.56□□□□□ -0.4
GABPB1-212ENST00000615671 K7EIL1 84 aa12.55□□□□□ -0.4
GABPB1-212ENST00000615671 LINC01546A6NGU7 62 aa12.54□□□□□ -0.4
GABPB1-212ENST00000615671 TRAV22A0A0B4J277 110 aa12.54□□□□□ -0.4
GABPB1-212ENST00000615671 OBSCN-AS1Q96MR7 158 aa12.53□□□□□ -0.4
GABPB1-212ENST00000615671 ANAPC11Q9NYG5 84 aa12.53□□□□□ -0.4
GABPB1-212ENST00000615671 TM2D3Q9BRN9 247 aa12.53□□□□□ -0.4
GABPB1-212ENST00000615671 A0A0G2JQZ4 141 aa12.51□□□□□ -0.41
GABPB1-212ENST00000615671 A0A1W2PNN7 141 aa12.51□□□□□ -0.41
GABPB1-212ENST00000615671 IGLV5-45A0A087WSX0 123 aa12.5□□□□□ -0.41
GABPB1-212ENST00000615671 SSBP3-AS1Q7Z2R9 100 aa12.5□□□□□ -0.41
GABPB1-212ENST00000615671 IGLV6-57P01721 117 aa12.49□□□□□ -0.41
GABPB1-212ENST00000615671 LINC00304Q8N9R0 145 aa12.49□□□□□ -0.41
GABPB1-212ENST00000615671 K7EQZ3 153 aa12.49□□□□□ -0.41
GABPB1-212ENST00000615671 SMCPP49901 116 aaPredicted RBP12.48□□□□□ -0.41
GABPB1-212ENST00000615671 C4orf26Q17RF5 130 aa12.48□□□□□ -0.41
GABPB1-212ENST00000615671 WDR87Q6ZQQ6 2873 aa12.48□□□□□ -0.41
GABPB1-212ENST00000615671 PIEZO1Q92508 2521 aa12.47□□□□□ -0.41
GABPB1-212ENST00000615671 TRBV7-4A0A0J9YYF1 115 aa12.46□□□□□ -0.41
GABPB1-212ENST00000615671 FN1P02751 2386 aaKnown RBP12.44□□□□□ -0.42
GABPB1-212ENST00000615671 VPREB1P12018 145 aa12.44□□□□□ -0.42
GABPB1-212ENST00000615671 MRPL34Q9BQ48 92 aaKnown RBP12.44□□□□□ -0.42
GABPB1-212ENST00000615671 KRTAP10-3P60369 221 aa12.44□□□□□ -0.42
GABPB1-212ENST00000615671 LINC01554Q52M75 96 aa12.43□□□□□ -0.42
GABPB1-212ENST00000615671 ZFYVE26Q68DK2 2539 aa12.43□□□□□ -0.42
GABPB1-212ENST00000615671 A8MWP4 228 aa12.43□□□□□ -0.42
GABPB1-212ENST00000615671 LOC110117498A0A087WWA1 95 aa12.42□□□□□ -0.42
GABPB1-212ENST00000615671 ABCA12Q86UK0 2595 aa12.42□□□□□ -0.42
GABPB1-212ENST00000615671 IGLV1-50A0A075B6I6 118 aa12.42□□□□□ -0.42
GABPB1-212ENST00000615671 C15orf56Q8N910 161 aa12.41□□□□□ -0.42
GABPB1-212ENST00000615671 LINC01600Q96MT4 127 aa12.41□□□□□ -0.42
GABPB1-212ENST00000615671 TLN1Q9Y490 2541 aaKnown RBP12.38□□□□□ -0.43
GABPB1-212ENST00000615671 C8orf87E5RJ46 101 aa12.38□□□□□ -0.43
GABPB1-212ENST00000615671 IGLV5-37A0A075B6J1 123 aa12.37□□□□□ -0.43
GABPB1-212ENST00000615671 IGFL1Q6UW32 110 aa12.37□□□□□ -0.43
GABPB1-212ENST00000615671 A0A087WTM6 91 aa12.35□□□□□ -0.43
GABPB1-212ENST00000615671 LOC101927531A0A1B0GV80 90 aa12.35□□□□□ -0.43
GABPB1-212ENST00000615671 MYO9AB2RTY4 2548 aa12.34□□□□□ -0.43
GABPB1-212ENST00000615671 COA5Q86WW8 74 aa12.34□□□□□ -0.43
GABPB1-212ENST00000615671 CSNK1G2-AS1Q8NCQ2 148 aa12.34□□□□□ -0.43
GABPB1-212ENST00000615671 PCSK5Q92824 1860 aa12.32□□□□□ -0.44
GABPB1-212ENST00000615671 H3BPC8 53 aa12.32□□□□□ -0.44
GABPB1-212ENST00000615671 ZNF861PO60384 105 aa12.31□□□□□ -0.44
GABPB1-212ENST00000615671 C9orf129Q5T035 196 aaKnown RBP12.31□□□□□ -0.44
GABPB1-212ENST00000615671 A0A0D9SG42 100 aa12.3□□□□□ -0.44
GABPB1-212ENST00000615671 A0A1B0GW54 56 aa12.29□□□□□ -0.44
GABPB1-212ENST00000615671 CENPFP49454 3210 aa12.28□□□□□ -0.44
GABPB1-212ENST00000615671 C8orf17Q9NRJ1 99 aa12.28□□□□□ -0.44
GABPB1-212ENST00000615671 CASC10Q5T4H9 136 aa12.28□□□□□ -0.44
GABPB1-212ENST00000615671 GOLGB1Q14789 3259 aaKnown RBP12.27□□□□□ -0.44
GABPB1-212ENST00000615671 TLN2Q9Y4G6 2542 aa12.27□□□□□ -0.45
GABPB1-212ENST00000615671 LITAFQ99732 161 aa12.27□□□□□ -0.45
GABPB1-212ENST00000615671 C19orf73Q9NVV2 129 aa12.26□□□□□ -0.45
GABPB1-212ENST00000615671 PRO0461Q9UI25 63 aa12.26□□□□□ -0.45
GABPB1-212ENST00000615671 KCNQ1DNQ9H478 68 aa12.25□□□□□ -0.45
GABPB1-212ENST00000615671 PRO0628Q9UI54 55 aa12.24□□□□□ -0.45
GABPB1-212ENST00000615671 RBM12B-AS1Q9P1G2 102 aa12.24□□□□□ -0.45
GABPB1-212ENST00000615671 LINC00528Q8N1L1 170 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms