RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 RETNLBQ9BQ08 111 aa3.17□□□□□ -1.9
CHD9-221ENST00000615216 LINC00315P59091 139 aa3.16□□□□□ -1.9
CHD9-221ENST00000615216 A8MTW9 85 aa3.16□□□□□ -1.9
CHD9-221ENST00000615216 Q6ZQT0 140 aa3.16□□□□□ -1.9
CHD9-221ENST00000615216 Q6ZRX8 168 aa3.16□□□□□ -1.9
CHD9-221ENST00000615216 X6R8D5 127 aa3.16□□□□□ -1.9
CHD9-221ENST00000615216 FN1P02751 2386 aaKnown RBP3.16□□□□□ -1.9
CHD9-221ENST00000615216 Q8NBF4 154 aa3.16□□□□□ -1.9
CHD9-221ENST00000615216 ANKRD11Q6UB99 2663 aaPredicted RBP3.16□□□□□ -1.9
CHD9-221ENST00000615216 GVQW2A0A096LPI5 108 aaPredicted RBP3.15□□□□□ -1.9
CHD9-221ENST00000615216 PRO0461Q9UI25 63 aa3.15□□□□□ -1.9
CHD9-221ENST00000615216 A0A1B0GU69 56 aa3.15□□□□□ -1.9
CHD9-221ENST00000615216 KLK9Q2XQG4 91 aa3.15□□□□□ -1.9
CHD9-221ENST00000615216 ABCA12Q86UK0 2595 aa3.15□□□□□ -1.9
CHD9-221ENST00000615216 TLN2Q9Y4G6 2542 aa3.15□□□□□ -1.91
CHD9-221ENST00000615216 C16orf90A8MZG2 172 aa3.15□□□□□ -1.91
CHD9-221ENST00000615216 ERC2-IT1O76042 136 aa3.15□□□□□ -1.91
CHD9-221ENST00000615216 DEFB116Q30KQ4 102 aa3.15□□□□□ -1.91
CHD9-221ENST00000615216 LINC00167Q96N53 147 aa3.15□□□□□ -1.91
CHD9-221ENST00000615216 MOBPQ13875 183 aa3.14□□□□□ -1.91
CHD9-221ENST00000615216 TRAV22A0A0B4J277 110 aa3.14□□□□□ -1.91
CHD9-221ENST00000615216 SPINK1P00995 79 aa3.14□□□□□ -1.91
CHD9-221ENST00000615216 IGKV2D-30A0A075B6S6 120 aa3.14□□□□□ -1.91
CHD9-221ENST00000615216 IGKV2-30P06310 120 aa3.14□□□□□ -1.91
CHD9-221ENST00000615216 MDFIQ99750 246 aa3.14□□□□□ -1.91
CHD9-221ENST00000615216 FAM218AQ96MZ4 157 aa3.14□□□□□ -1.91
CHD9-221ENST00000615216 SMCPP49901 116 aaPredicted RBP3.13□□□□□ -1.91
CHD9-221ENST00000615216 TRBV7-4A0A0J9YYF1 115 aa3.13□□□□□ -1.91
CHD9-221ENST00000615216 SPAG11AQ6PDA7 123 aa3.13□□□□□ -1.91
CHD9-221ENST00000615216 IGLV6-57P01721 117 aa3.13□□□□□ -1.91
CHD9-221ENST00000615216 LINC00476Q8WZB0 136 aa3.12□□□□□ -1.91
CHD9-221ENST00000615216 LINC00313P59037 77 aa3.12□□□□□ -1.91
CHD9-221ENST00000615216 Q6ZRP5 223 aa3.12□□□□□ -1.91
CHD9-221ENST00000615216 C8orf87E5RJ46 101 aa3.12□□□□□ -1.91
CHD9-221ENST00000615216 LOC101927531A0A1B0GV80 90 aa3.12□□□□□ -1.91
CHD9-221ENST00000615216 EPM2AB3EWF7 344 aa3.12□□□□□ -1.91
CHD9-221ENST00000615216 DNAH10OSP0CZ25 163 aa3.12□□□□□ -1.91
CHD9-221ENST00000615216 NCOR2Q9Y618 2525 aa3.12□□□□□ -1.91
CHD9-221ENST00000615216 Q8NAQ8 132 aa3.11□□□□□ -1.91
CHD9-221ENST00000615216 RTL8CO15255 209 aa3.11□□□□□ -1.91
CHD9-221ENST00000615216 A8MWP4 228 aa3.11□□□□□ -1.91
CHD9-221ENST00000615216 NBDYA0A0U1RRE5 68 aa3.11□□□□□ -1.91
CHD9-221ENST00000615216 SPACA4Q8TDM5 124 aa3.11□□□□□ -1.91
CHD9-221ENST00000615216 USP9XQ93008 2570 aaPredicted RBP3.11□□□□□ -1.91
CHD9-221ENST00000615216 LITAFQ99732 161 aa3.1□□□□□ -1.91
CHD9-221ENST00000615216 Q9UF83 564 aa3.1□□□□□ -1.91
CHD9-221ENST00000615216 TYMSOSQ8TAI1 123 aa3.09□□□□□ -1.91
CHD9-221ENST00000615216 FAM229AH3BQW9 127 aa3.09□□□□□ -1.91
CHD9-221ENST00000615216 PHF5AQ7RTV0 110 aaKnown RBP3.09□□□□□ -1.91
CHD9-221ENST00000615216 CYP4F30PQ9H0H9 118 aa3.09□□□□□ -1.92
CHD9-221ENST00000615216 LINC00588Q9Y4M8 146 aa3.09□□□□□ -1.92
CHD9-221ENST00000615216 DOPEY1Q5JWR5 2465 aa3.09□□□□□ -1.92
CHD9-221ENST00000615216 C4orf26Q17RF5 130 aa3.09□□□□□ -1.92
CHD9-221ENST00000615216 TM2D3Q9BRN9 247 aa3.08□□□□□ -1.92
CHD9-221ENST00000615216 KCNQ1DNQ9H478 68 aa3.08□□□□□ -1.92
CHD9-221ENST00000615216 SPTBN4Q9H254 2564 aa3.08□□□□□ -1.92
CHD9-221ENST00000615216 SETD2Q9BYW2 2564 aaPredicted RBP3.08□□□□□ -1.92
CHD9-221ENST00000615216 VPREB1P12018 145 aa3.08□□□□□ -1.92
CHD9-221ENST00000615216 PLA2G1BP04054 148 aaKnown RBP3.08□□□□□ -1.92
CHD9-221ENST00000615216 SERTAD4-AS1Q5TG53 156 aa3.07□□□□□ -1.92
CHD9-221ENST00000615216 ST20-AS1Q8NBB2 130 aa3.07□□□□□ -1.92
CHD9-221ENST00000615216 RPL37AP61513 92 aaKnown RBP3.07□□□□□ -1.92
CHD9-221ENST00000615216 ATP11AUNQ6ZP68 121 aa3.07□□□□□ -1.92
CHD9-221ENST00000615216 PLA2G2DQ9UNK4 145 aa3.07□□□□□ -1.92
CHD9-221ENST00000615216 JMJD1CQ15652 2540 aa3.07□□□□□ -1.92
CHD9-221ENST00000615216 F8P00451 2351 aa3.07□□□□□ -1.92
CHD9-221ENST00000615216 CHTF8P0CG12 524 aa3.07□□□□□ -1.92
CHD9-221ENST00000615216 CSNK1G2-AS1Q8NCQ2 148 aa3.06□□□□□ -1.92
CHD9-221ENST00000615216 IGLV1-50A0A075B6I6 118 aa3.06□□□□□ -1.92
CHD9-221ENST00000615216 PKD1L2Q7Z442 2459 aa3.06□□□□□ -1.92
CHD9-221ENST00000615216 MRPL34Q9BQ48 92 aaKnown RBP3.06□□□□□ -1.92
CHD9-221ENST00000615216 Q96NJ1 140 aa3.06□□□□□ -1.92
CHD9-221ENST00000615216 COA5Q86WW8 74 aa3.06□□□□□ -1.92
CHD9-221ENST00000615216 USP9YO00507 2555 aaPredicted RBP3.05□□□□□ -1.92
CHD9-221ENST00000615216 TLX1NBP0CAT3 122 aa3.05□□□□□ -1.92
CHD9-221ENST00000615216 LINC00528Q8N1L1 170 aa3.05□□□□□ -1.92
CHD9-221ENST00000615216 K7EQZ3 153 aa3.05□□□□□ -1.92
CHD9-221ENST00000615216 FAM168BA1KXE4 195 aa3.05□□□□□ -1.92
CHD9-221ENST00000615216 CEP295Q9C0D2 2601 aa3.04□□□□□ -1.92
CHD9-221ENST00000615216 KLKP1Q107X0 134 aa3.04□□□□□ -1.92
CHD9-221ENST00000615216 PRR15Q8IV56 129 aa3.04□□□□□ -1.92
CHD9-221ENST00000615216 PRR34Q9NV39 138 aa3.04□□□□□ -1.92
CHD9-221ENST00000615216 EP400Q96L91 3159 aa3.04□□□□□ -1.92
CHD9-221ENST00000615216 CR1P17927 2039 aa3.04□□□□□ -1.92
CHD9-221ENST00000615216 KRTAP24-1Q3LI83 254 aa3.04□□□□□ -1.92
CHD9-221ENST00000615216 A0A1B0GVX0 72 aa3.03□□□□□ -1.92
CHD9-221ENST00000615216 UQCR11O14957 56 aa3.03□□□□□ -1.92
CHD9-221ENST00000615216 IGFL1Q6UW32 110 aa3.03□□□□□ -1.92
CHD9-221ENST00000615216 C15orf56Q8N910 161 aa3.03□□□□□ -1.92
CHD9-221ENST00000615216 LINC00612Q8N6U2 182 aa3.03□□□□□ -1.92
CHD9-221ENST00000615216 WWC2-AS2Q96NR7 200 aa3.03□□□□□ -1.92
CHD9-221ENST00000615216 CHD8Q9HCK8 2581 aa3.03□□□□□ -1.92
CHD9-221ENST00000615216 C8orf17Q9NRJ1 99 aa3.03□□□□□ -1.92
CHD9-221ENST00000615216 MTORP42345 2549 aa3.02□□□□□ -1.93
CHD9-221ENST00000615216 LINC00304Q8N9R0 145 aa3.02□□□□□ -1.93
CHD9-221ENST00000615216 SPINT4Q6UDR6 99 aa3.02□□□□□ -1.93
CHD9-221ENST00000615216 SPANXA2-OT1Q8N9U9 137 aa3.02□□□□□ -1.93
CHD9-221ENST00000615216 LINC01600Q96MT4 127 aa3.02□□□□□ -1.93
CHD9-221ENST00000615216 C19orf73Q9NVV2 129 aa3.02□□□□□ -1.93
CHD9-221ENST00000615216 SSBP3-AS1Q7Z2R9 100 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms