RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 Q9UF83 564 aa12.05□□□□□ -0.48
HMGXB3-206ENST00000613459 Q6ZQT0 140 aa12.04□□□□□ -0.48
HMGXB3-206ENST00000613459 WDR87Q6ZQQ6 2873 aa12.04□□□□□ -0.48
HMGXB3-206ENST00000613459 LINC00167Q96N53 147 aa12.03□□□□□ -0.48
HMGXB3-206ENST00000613459 C6orf48Q9UBA6 75 aa12.03□□□□□ -0.48
HMGXB3-206ENST00000613459 EP400Q96L91 3159 aa12.02□□□□□ -0.48
HMGXB3-206ENST00000613459 FAM218AQ96MZ4 157 aa12.02□□□□□ -0.48
HMGXB3-206ENST00000613459 EXPH5Q8NEV8 1989 aa12.01□□□□□ -0.49
HMGXB3-206ENST00000613459 IGKV2D-30A0A075B6S6 120 aa12□□□□□ -0.49
HMGXB3-206ENST00000613459 IGKV2-30P06310 120 aa12□□□□□ -0.49
HMGXB3-206ENST00000613459 Q8NBF4 154 aa12□□□□□ -0.49
HMGXB3-206ENST00000613459 SERTAD4-AS1Q5TG53 156 aa11.99□□□□□ -0.49
HMGXB3-206ENST00000613459 KLK9Q2XQG4 91 aa11.99□□□□□ -0.49
HMGXB3-206ENST00000613459 Q6ZRX8 168 aa11.97□□□□□ -0.49
HMGXB3-206ENST00000613459 TET2Q6N021 2002 aaPredicted RBP11.97□□□□□ -0.49
HMGXB3-206ENST00000613459 GVQW2A0A096LPI5 108 aaPredicted RBP11.96□□□□□ -0.5
HMGXB3-206ENST00000613459 MDFIQ99750 246 aa11.94□□□□□ -0.5
HMGXB3-206ENST00000613459 MOBPQ13875 183 aa11.93□□□□□ -0.5
HMGXB3-206ENST00000613459 C8orf87E5RJ46 101 aa11.92□□□□□ -0.5
HMGXB3-206ENST00000613459 TRAV22A0A0B4J277 110 aa11.91□□□□□ -0.5
HMGXB3-206ENST00000613459 LINC00476Q8WZB0 136 aa11.91□□□□□ -0.5
HMGXB3-206ENST00000613459 DOPEY1Q5JWR5 2465 aa11.9□□□□□ -0.5
HMGXB3-206ENST00000613459 C16orf90A8MZG2 172 aa11.9□□□□□ -0.5
HMGXB3-206ENST00000613459 ERC2-IT1O76042 136 aa11.9□□□□□ -0.5
HMGXB3-206ENST00000613459 ABCA12Q86UK0 2595 aa11.9□□□□□ -0.5
HMGXB3-206ENST00000613459 USP9XQ93008 2570 aaPredicted RBP11.9□□□□□ -0.5
HMGXB3-206ENST00000613459 TM2D3Q9BRN9 247 aa11.89□□□□□ -0.51
HMGXB3-206ENST00000613459 JMJD1CQ15652 2540 aa11.88□□□□□ -0.51
HMGXB3-206ENST00000613459 TRBV7-4A0A0J9YYF1 115 aa11.87□□□□□ -0.51
HMGXB3-206ENST00000613459 ATP11AUNQ6ZP68 121 aa11.86□□□□□ -0.51
HMGXB3-206ENST00000613459 TLN2Q9Y4G6 2542 aa11.86□□□□□ -0.51
HMGXB3-206ENST00000613459 Q6ZRP5 223 aa11.85□□□□□ -0.51
HMGXB3-206ENST00000613459 LOC101927531A0A1B0GV80 90 aa11.85□□□□□ -0.51
HMGXB3-206ENST00000613459 SPACA4Q8TDM5 124 aa11.85□□□□□ -0.51
HMGXB3-206ENST00000613459 LINC00313P59037 77 aa11.84□□□□□ -0.51
HMGXB3-206ENST00000613459 CEP295Q9C0D2 2601 aa11.84□□□□□ -0.51
HMGXB3-206ENST00000613459 VPREB1P12018 145 aa11.83□□□□□ -0.52
HMGXB3-206ENST00000613459 EPM2AB3EWF7 344 aa11.82□□□□□ -0.52
HMGXB3-206ENST00000613459 CYP4F30PQ9H0H9 118 aa11.82□□□□□ -0.52
HMGXB3-206ENST00000613459 LITAFQ99732 161 aa11.82□□□□□ -0.52
HMGXB3-206ENST00000613459 ANKRD11Q6UB99 2663 aaPredicted RBP11.82□□□□□ -0.52
HMGXB3-206ENST00000613459 IGLV6-57P01721 117 aa11.81□□□□□ -0.52
HMGXB3-206ENST00000613459 Q8NAQ8 132 aa11.81□□□□□ -0.52
HMGXB3-206ENST00000613459 NBDYA0A0U1RRE5 68 aa11.81□□□□□ -0.52
HMGXB3-206ENST00000613459 ZFYVE26Q68DK2 2539 aa11.8□□□□□ -0.52
HMGXB3-206ENST00000613459 FN1P02751 2386 aaKnown RBP11.8□□□□□ -0.52
HMGXB3-206ENST00000613459 RTL8CO15255 209 aa11.79□□□□□ -0.52
HMGXB3-206ENST00000613459 PHF5AQ7RTV0 110 aaKnown RBP11.79□□□□□ -0.52
HMGXB3-206ENST00000613459 COL4A2P08572 1712 aa11.78□□□□□ -0.52
HMGXB3-206ENST00000613459 A8MWP4 228 aa11.78□□□□□ -0.52
HMGXB3-206ENST00000613459 DNAH10OSP0CZ25 163 aa11.77□□□□□ -0.52
HMGXB3-206ENST00000613459 USP9YO00507 2555 aaPredicted RBP11.77□□□□□ -0.52
HMGXB3-206ENST00000613459 FAM229AH3BQW9 127 aa11.77□□□□□ -0.53
HMGXB3-206ENST00000613459 ST20-AS1Q8NBB2 130 aa11.76□□□□□ -0.53
HMGXB3-206ENST00000613459 RPL37AP61513 92 aaKnown RBP11.74□□□□□ -0.53
HMGXB3-206ENST00000613459 TYMSOSQ8TAI1 123 aa11.74□□□□□ -0.53
HMGXB3-206ENST00000613459 SETD2Q9BYW2 2564 aaPredicted RBP11.74□□□□□ -0.53
HMGXB3-206ENST00000613459 LINC00588Q9Y4M8 146 aa11.74□□□□□ -0.53
HMGXB3-206ENST00000613459 SPINT4Q6UDR6 99 aa11.74□□□□□ -0.53
HMGXB3-206ENST00000613459 LRRK2Q5S007 2527 aa11.74□□□□□ -0.53
HMGXB3-206ENST00000613459 COA5Q86WW8 74 aa11.73□□□□□ -0.53
HMGXB3-206ENST00000613459 PTPRBP23467 1997 aa11.73□□□□□ -0.53
HMGXB3-206ENST00000613459 KCNQ1DNQ9H478 68 aa11.71□□□□□ -0.54
HMGXB3-206ENST00000613459 MRPL34Q9BQ48 92 aaKnown RBP11.7□□□□□ -0.54
HMGXB3-206ENST00000613459 K7EQZ3 153 aa11.68□□□□□ -0.54
HMGXB3-206ENST00000613459 CENPFP49454 3210 aa11.68□□□□□ -0.54
HMGXB3-206ENST00000613459 A8MUN3 132 aa11.68□□□□□ -0.54
HMGXB3-206ENST00000613459 IGLV1-50A0A075B6I6 118 aa11.67□□□□□ -0.54
HMGXB3-206ENST00000613459 LINC00336Q6ZUF6 198 aa11.67□□□□□ -0.54
HMGXB3-206ENST00000613459 COL27A1Q8IZC6 1860 aaPredicted RBP11.66□□□□□ -0.54
HMGXB3-206ENST00000613459 KLKP1Q107X0 134 aa11.66□□□□□ -0.54
HMGXB3-206ENST00000613459 UQCR11O14957 56 aa11.65□□□□□ -0.54
HMGXB3-206ENST00000613459 KRTAP24-1Q3LI83 254 aa11.65□□□□□ -0.54
HMGXB3-206ENST00000613459 IGLV8-61A0A075B6I0 122 aa11.65□□□□□ -0.55
HMGXB3-206ENST00000613459 LINC00528Q8N1L1 170 aa11.65□□□□□ -0.55
HMGXB3-206ENST00000613459 PKD1L2Q7Z442 2459 aa11.63□□□□□ -0.55
HMGXB3-206ENST00000613459 LINC01600Q96MT4 127 aa11.63□□□□□ -0.55
HMGXB3-206ENST00000613459 Q96NJ1 140 aa11.62□□□□□ -0.55
HMGXB3-206ENST00000613459 CHTF8P0CG12 524 aa11.6□□□□□ -0.55
HMGXB3-206ENST00000613459 PLA2G1BP04054 148 aaKnown RBP11.6□□□□□ -0.55
HMGXB3-206ENST00000613459 CSNK1G2-AS1Q8NCQ2 148 aa11.6□□□□□ -0.55
HMGXB3-206ENST00000613459 PLA2G2DQ9UNK4 145 aa11.6□□□□□ -0.55
HMGXB3-206ENST00000613459 PRR34Q9NV39 138 aa11.6□□□□□ -0.55
HMGXB3-206ENST00000613459 SSBP3-AS1Q7Z2R9 100 aa11.58□□□□□ -0.56
HMGXB3-206ENST00000613459 CHD8Q9HCK8 2581 aa11.58□□□□□ -0.56
HMGXB3-206ENST00000613459 ZNF462Q96JM2 2506 aa11.58□□□□□ -0.56
HMGXB3-206ENST00000613459 WIPF1O43516 503 aa11.57□□□□□ -0.56
HMGXB3-206ENST00000613459 PRR15Q8IV56 129 aa11.57□□□□□ -0.56
HMGXB3-206ENST00000613459 CD164Q04900 197 aa11.57□□□□□ -0.56
HMGXB3-206ENST00000613459 WWC2-AS2Q96NR7 200 aa11.56□□□□□ -0.56
HMGXB3-206ENST00000613459 TLX1NBP0CAT3 122 aa11.56□□□□□ -0.56
HMGXB3-206ENST00000613459 MIR22HGQ0VDD5 57 aa11.56□□□□□ -0.56
HMGXB3-206ENST00000613459 SPTBN4Q9H254 2564 aa11.55□□□□□ -0.56
HMGXB3-206ENST00000613459 EIF4EBP3O60516 100 aaPredicted RBP11.55□□□□□ -0.56
HMGXB3-206ENST00000613459 C8orf17Q9NRJ1 99 aa11.55□□□□□ -0.56
HMGXB3-206ENST00000613459 IGFL1Q6UW32 110 aa11.54□□□□□ -0.56
HMGXB3-206ENST00000613459 FAM168BA1KXE4 195 aa11.54□□□□□ -0.56
HMGXB3-206ENST00000613459 MTORP42345 2549 aa11.53□□□□□ -0.56
HMGXB3-206ENST00000613459 LINC00612Q8N6U2 182 aa11.53□□□□□ -0.56
HMGXB3-206ENST00000613459 H7BZZ5 65 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms