RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 ZNF561-AS1K7EIQ3 104 aa18.72■□□□□ 0.59
CSPG5-205ENST00000610462 C15orf53Q8NAA6 179 aa18.72■□□□□ 0.59
CSPG5-205ENST00000610462 NCR3O14931 201 aa18.71■□□□□ 0.59
CSPG5-205ENST00000610462 C1orf43Q9BWL3 253 aa18.71■□□□□ 0.59
CSPG5-205ENST00000610462 NOTCH1P46531 2555 aa18.71■□□□□ 0.58
CSPG5-205ENST00000610462 HIGD2BQ4VC39 106 aa18.7■□□□□ 0.58
CSPG5-205ENST00000610462 LECT2O14960 151 aa18.69■□□□□ 0.58
CSPG5-205ENST00000610462 DNAH10OSP0CZ25 163 aa18.69■□□□□ 0.58
CSPG5-205ENST00000610462 GAGE2BQ13066 116 aa18.69■□□□□ 0.58
CSPG5-205ENST00000610462 GAGE2EQ4V326 116 aa18.69■□□□□ 0.58
CSPG5-205ENST00000610462 C15orf56Q8N910 161 aa18.69■□□□□ 0.58
CSPG5-205ENST00000610462 GAGE2DQ9UEU5 116 aa18.69■□□□□ 0.58
CSPG5-205ENST00000610462 CAMK2N2Q96S95 79 aa18.68■□□□□ 0.58
CSPG5-205ENST00000610462 S100A7L2Q5SY68 101 aa18.65■□□□□ 0.58
CSPG5-205ENST00000610462 IGKV2D-24A0A075B6R9 120 aa18.64■□□□□ 0.57
CSPG5-205ENST00000610462 Q6Q795 121 aa18.64■□□□□ 0.57
CSPG5-205ENST00000610462 C2orf48Q96LS8 159 aa18.64■□□□□ 0.57
CSPG5-205ENST00000610462 TTC32Q5I0X7 151 aa18.63■□□□□ 0.57
CSPG5-205ENST00000610462 A0A1B0GX51 115 aa18.62■□□□□ 0.57
CSPG5-205ENST00000610462 ANAPC13Q9BS18 74 aa18.62■□□□□ 0.57
CSPG5-205ENST00000610462 LINC00588Q9Y4M8 146 aa18.62■□□□□ 0.57
CSPG5-205ENST00000610462 Q6ZRU5 148 aa18.61■□□□□ 0.57
CSPG5-205ENST00000610462 HUWE1Q7Z6Z7 4374 aaKnown RBP18.61■□□□□ 0.57
CSPG5-205ENST00000610462 ACYP1P07311 99 aa18.6■□□□□ 0.57
CSPG5-205ENST00000610462 LINC00167Q96N53 147 aa18.59■□□□□ 0.57
CSPG5-205ENST00000610462 XAGE1AQ9HD64 81 aa18.59■□□□□ 0.57
CSPG5-205ENST00000610462 F8WDY8 70 aa18.58■□□□□ 0.57
CSPG5-205ENST00000610462 IGLV6-57P01721 117 aa18.58■□□□□ 0.57
CSPG5-205ENST00000610462 INAFM2P0DMQ5 153 aa18.58■□□□□ 0.57
CSPG5-205ENST00000610462 RPL18AQ02543 176 aaKnown RBP18.58■□□□□ 0.57
CSPG5-205ENST00000610462 C6orf99Q4VX62 202 aa18.58■□□□□ 0.57
CSPG5-205ENST00000610462 NBEAL1Q6ZS30 2694 aa18.58■□□□□ 0.56
CSPG5-205ENST00000610462 SLPIP03973 132 aa18.57■□□□□ 0.56
CSPG5-205ENST00000610462 Q8N814 137 aa18.56■□□□□ 0.56
CSPG5-205ENST00000610462 ORMDL1Q9P0S3 153 aa18.56■□□□□ 0.56
CSPG5-205ENST00000610462 NDUFV3P56181 108 aaKnown RBP18.54■□□□□ 0.56
CSPG5-205ENST00000610462 NDUFC2-KCTD14E9PQ53 114 aa18.52■□□□□ 0.56
CSPG5-205ENST00000610462 OBSCN-AS1Q96MR7 158 aa18.51■□□□□ 0.55
CSPG5-205ENST00000610462 NHLRC4P0CG21 123 aaPredicted RBP18.5■□□□□ 0.55
CSPG5-205ENST00000610462 C9orf129Q5T035 196 aaKnown RBP18.5■□□□□ 0.55
CSPG5-205ENST00000610462 TRBV10-3A0A0K0K1G6 114 aa18.48■□□□□ 0.55
CSPG5-205ENST00000610462 VPREB1P12018 145 aa18.48■□□□□ 0.55
CSPG5-205ENST00000610462 SYCNQ0VAF6 134 aa18.48■□□□□ 0.55
CSPG5-205ENST00000610462 LINC00575Q6W349 94 aa18.48■□□□□ 0.55
CSPG5-205ENST00000610462 TRBV7-7A0A0K0K1E9 115 aa18.48■□□□□ 0.55
CSPG5-205ENST00000610462 MDFIQ99750 246 aa18.46■□□□□ 0.55
CSPG5-205ENST00000610462 UPK3BQ9BT76 320 aa18.46■□□□□ 0.55
CSPG5-205ENST00000610462 SMCR5Q8TEV8 140 aa18.46■□□□□ 0.55
CSPG5-205ENST00000610462 TRAV23DV6A0A075B6W5 121 aa18.44■□□□□ 0.54
CSPG5-205ENST00000610462 Q6ZRP5 223 aa18.43■□□□□ 0.54
CSPG5-205ENST00000610462 TMEM256-PLSCR3K7ERE1 68 aa18.42■□□□□ 0.54
CSPG5-205ENST00000610462 C14orf132Q9NPU4 83 aa18.42■□□□□ 0.54
CSPG5-205ENST00000610462 GAGE2AQ6NT46 116 aa18.42■□□□□ 0.54
CSPG5-205ENST00000610462 SDIM1Q6ZPB5 146 aa18.42■□□□□ 0.54
CSPG5-205ENST00000610462 RMI2Q96E14 147 aa18.42■□□□□ 0.54
CSPG5-205ENST00000610462 hADV29S1A0JD25 119 aa18.41■□□□□ 0.54
CSPG5-205ENST00000610462 M0R378 163 aa18.41■□□□□ 0.54
CSPG5-205ENST00000610462 LINC00643Q86TS7 51 aa18.41■□□□□ 0.54
CSPG5-205ENST00000610462 DIRC1Q969H9 104 aa18.4■□□□□ 0.54
CSPG5-205ENST00000610462 MGAM2Q2M2H8 2515 aa18.39■□□□□ 0.53
CSPG5-205ENST00000610462 USP17L23D6RBM5 183 aa18.37■□□□□ 0.53
CSPG5-205ENST00000610462 CASC10Q5T4H9 136 aa18.37■□□□□ 0.53
CSPG5-205ENST00000610462 IMUPQ9GZP8 106 aa18.37■□□□□ 0.53
CSPG5-205ENST00000610462 ZNF73O43830 326 aaPredicted RBP18.36■□□□□ 0.53
CSPG5-205ENST00000610462 JMJD7-PLA2G4BH0Y9G9 81 aa18.35■□□□□ 0.53
CSPG5-205ENST00000610462 DNAH1Q9P2D7 4330 aa18.34■□□□□ 0.53
CSPG5-205ENST00000610462 TLX1NBP0CAT3 122 aa18.34■□□□□ 0.53
CSPG5-205ENST00000610462 TRBV7-6A0A0J9YX20 115 aa18.32■□□□□ 0.52
CSPG5-205ENST00000610462 COX7BP24311 80 aa18.31■□□□□ 0.52
CSPG5-205ENST00000610462 B9D2Q9BPU9 175 aa18.31■□□□□ 0.52
CSPG5-205ENST00000610462 ELOF1P60002 83 aaKnown RBP18.29■□□□□ 0.52
CSPG5-205ENST00000610462 DNAH9Q9NYC9 4486 aa18.29■□□□□ 0.52
CSPG5-205ENST00000610462 CCDC179H3BU77 68 aa18.28■□□□□ 0.52
CSPG5-205ENST00000610462 Q6ZQY7 126 aa18.26■□□□□ 0.51
CSPG5-205ENST00000610462 FAM236AA0A1B0GUQ0 79 aa18.25■□□□□ 0.51
CSPG5-205ENST00000610462 FAM236BA0A1B0GV22 79 aa18.25■□□□□ 0.51
CSPG5-205ENST00000610462 H3BQ85 93 aa18.25■□□□□ 0.51
CSPG5-205ENST00000610462 CCKP06307 115 aa18.25■□□□□ 0.51
CSPG5-205ENST00000610462 NKAPP1Q8N9T2 125 aa18.24■□□□□ 0.51
CSPG5-205ENST00000610462 APLNQ9ULZ1 77 aa18.24■□□□□ 0.51
CSPG5-205ENST00000610462 PLA2G2DQ9UNK4 145 aa18.24■□□□□ 0.51
CSPG5-205ENST00000610462 SERTAD4-AS1Q5TG53 156 aa18.23■□□□□ 0.51
CSPG5-205ENST00000610462 B5MCH6 92 aa18.22■□□□□ 0.51
CSPG5-205ENST00000610462 COL7A1Q02388 2944 aa18.21■□□□□ 0.51
CSPG5-205ENST00000610462 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP18.21■□□□□ 0.51
CSPG5-205ENST00000610462 LINC00846Q9NV44 126 aa18.19■□□□□ 0.5
CSPG5-205ENST00000610462 UBE2DNLQ8IWF7 75 aa18.18■□□□□ 0.5
CSPG5-205ENST00000610462 LINC00528Q8N1L1 170 aa18.18■□□□□ 0.5
CSPG5-205ENST00000610462 C7orf33Q8WU49 177 aa18.18■□□□□ 0.5
CSPG5-205ENST00000610462 KRTAP1-5Q9BYS1 174 aa18.18■□□□□ 0.5
CSPG5-205ENST00000610462 KCNQ1DNQ9H478 68 aa18.18■□□□□ 0.5
CSPG5-205ENST00000610462 LAMTOR3Q9UHA4 124 aa18.16■□□□□ 0.5
CSPG5-205ENST00000610462 IGLV5-37A0A075B6J1 123 aa18.15■□□□□ 0.5
CSPG5-205ENST00000610462 RBM3P98179 157 aaKnown RBP18.15■□□□□ 0.5
CSPG5-205ENST00000610462 GHRHP01286 108 aa18.14■□□□□ 0.5
CSPG5-205ENST00000610462 STAB2Q8WWQ8 2551 aa18.14■□□□□ 0.49
CSPG5-205ENST00000610462 LOC107984640A0A0U1RRK4 108 aa18.13■□□□□ 0.49
CSPG5-205ENST00000610462 DYNC2H1Q8NCM8 4307 aaKnown RBP18.12■□□□□ 0.49
CSPG5-205ENST00000610462 Q6JHZ5 121 aa18.11■□□□□ 0.49
CSPG5-205ENST00000610462 SS18L2Q9UHA2 77 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms