RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 C14orf144Q96I85 54 aa4.87□□□□□ -1.63
MSH6-211ENST00000606499 LITAFQ99732 161 aa4.87□□□□□ -1.63
MSH6-211ENST00000606499 SND1-IT1Q9HBX3 110 aa4.87□□□□□ -1.63
MSH6-211ENST00000606499 LINC00474Q9P2X8 69 aa4.87□□□□□ -1.63
MSH6-211ENST00000606499 RYR1P21817 5038 aa4.86□□□□□ -1.63
MSH6-211ENST00000606499 HSPG2P98160 4391 aa4.86□□□□□ -1.63
MSH6-211ENST00000606499 A0A087WYN8 130 aa4.86□□□□□ -1.63
MSH6-211ENST00000606499 A0A1W2PNN7 141 aa4.86□□□□□ -1.63
MSH6-211ENST00000606499 XGP55808 180 aa4.86□□□□□ -1.63
MSH6-211ENST00000606499 NPC2P61916 151 aa4.86□□□□□ -1.63
MSH6-211ENST00000606499 FAM19A5Q7Z5A7 132 aaPredicted RBP4.86□□□□□ -1.63
MSH6-211ENST00000606499 BOD1L2Q8IYS8 172 aa4.86□□□□□ -1.63
MSH6-211ENST00000606499 Q8NDZ9 215 aa4.86□□□□□ -1.63
MSH6-211ENST00000606499 CIRBP-AS1Q8TBR5 109 aa4.86□□□□□ -1.63
MSH6-211ENST00000606499 DPH3Q96FX2 82 aa4.86□□□□□ -1.63
MSH6-211ENST00000606499 LINC00587B1AMM8 73 aa4.85□□□□□ -1.63
MSH6-211ENST00000606499 EIF4EBP3O60516 100 aaPredicted RBP4.85□□□□□ -1.63
MSH6-211ENST00000606499 TIMM17BO60830 172 aa4.85□□□□□ -1.63
MSH6-211ENST00000606499 SERTAD4-AS1Q5TG53 156 aa4.85□□□□□ -1.63
MSH6-211ENST00000606499 KRTAP7-1Q8IUC3 87 aa4.85□□□□□ -1.63
MSH6-211ENST00000606499 PLAC8Q9NZF1 115 aa4.85□□□□□ -1.63
MSH6-211ENST00000606499 TMEM238C9JI98 176 aa4.84□□□□□ -1.63
MSH6-211ENST00000606499 DLEU1O43261 78 aa4.84□□□□□ -1.63
MSH6-211ENST00000606499 CDK2AP2O75956 126 aa4.84□□□□□ -1.63
MSH6-211ENST00000606499 S100A12P80511 92 aa4.84□□□□□ -1.63
MSH6-211ENST00000606499 SLC25A34Q6PIV7 304 aa4.84□□□□□ -1.63
MSH6-211ENST00000606499 SOSTDC1Q6X4U4 206 aa4.84□□□□□ -1.63
MSH6-211ENST00000606499 M0QXV9 152 aa4.83□□□□□ -1.64
MSH6-211ENST00000606499 C2orf91Q6ZV80 131 aa4.83□□□□□ -1.64
MSH6-211ENST00000606499 C12orf57Q99622 126 aa4.83□□□□□ -1.64
MSH6-211ENST00000606499 SPANXDQ9BXN6 97 aa4.83□□□□□ -1.64
MSH6-211ENST00000606499 SPANXCQ9NY87 97 aa4.83□□□□□ -1.64
MSH6-211ENST00000606499 EPM2AB3EWF7 344 aa4.82□□□□□ -1.64
MSH6-211ENST00000606499 SMR3BP02814 79 aaPredicted RBP4.82□□□□□ -1.64
MSH6-211ENST00000606499 VPREB1P12018 145 aa4.82□□□□□ -1.64
MSH6-211ENST00000606499 PRR3P79522 188 aaKnown RBP4.82□□□□□ -1.64
MSH6-211ENST00000606499 PHF5AQ7RTV0 110 aaKnown RBP4.82□□□□□ -1.64
MSH6-211ENST00000606499 LINC00308Q8TCZ7 52 aa4.82□□□□□ -1.64
MSH6-211ENST00000606499 MIEN1Q9BRT3 115 aa4.82□□□□□ -1.64
MSH6-211ENST00000606499 PRO1933Q9H354 126 aa4.82□□□□□ -1.64
MSH6-211ENST00000606499 PLA2G2DQ9UNK4 145 aa4.82□□□□□ -1.64
MSH6-211ENST00000606499 FAT1Q14517 4588 aa4.81□□□□□ -1.64
MSH6-211ENST00000606499 LOC107984156A0A0G2JMH3 177 aa4.81□□□□□ -1.64
MSH6-211ENST00000606499 GAGE10A6NGK3 116 aa4.81□□□□□ -1.64
MSH6-211ENST00000606499 NCR3O14931 201 aa4.81□□□□□ -1.64
MSH6-211ENST00000606499 GHRHP01286 108 aa4.81□□□□□ -1.64
MSH6-211ENST00000606499 ARL17AQ8IVW1 177 aa4.81□□□□□ -1.64
MSH6-211ENST00000606499 NKAPP1Q8N9T2 125 aa4.81□□□□□ -1.64
MSH6-211ENST00000606499 SPANXB1Q9NS25 103 aaPredicted RBP4.81□□□□□ -1.64
MSH6-211ENST00000606499 C22orf24Q9Y442 160 aa4.81□□□□□ -1.64
MSH6-211ENST00000606499 HERC2O95714 4834 aa4.8□□□□□ -1.64
MSH6-211ENST00000606499 IGLV5-37A0A075B6J1 123 aa4.8□□□□□ -1.64
MSH6-211ENST00000606499 RPL24P83731 157 aaKnown RBP4.8□□□□□ -1.64
MSH6-211ENST00000606499 SRSF9Q13242 221 aaKnown RBP eCLIP4.8□□□□□ -1.64
MSH6-211ENST00000606499 MRPL55Q7Z7F7 128 aaKnown RBP4.8□□□□□ -1.64
MSH6-211ENST00000606499 KRTAP11-1Q8IUC1 163 aa4.8□□□□□ -1.64
MSH6-211ENST00000606499 MUSTN1Q8IVN3 82 aa4.8□□□□□ -1.64
MSH6-211ENST00000606499 LINC00518Q8N0U6 118 aa4.8□□□□□ -1.64
MSH6-211ENST00000606499 HIST1H4GQ99525 98 aa4.8□□□□□ -1.64
MSH6-211ENST00000606499 KRTAP17-1Q9BYP8 105 aa4.8□□□□□ -1.64
MSH6-211ENST00000606499 HIGD1BQ9P298 99 aa4.8□□□□□ -1.64
MSH6-211ENST00000606499 UQCR10Q9UDW1 63 aa4.8□□□□□ -1.64
MSH6-211ENST00000606499 VPS13BQ7Z7G8 4022 aa4.79□□□□□ -1.64
MSH6-211ENST00000606499 IFITM1P13164 125 aa4.79□□□□□ -1.64
MSH6-211ENST00000606499 Q6ZVH6 145 aa4.79□□□□□ -1.64
MSH6-211ENST00000606499 C7orf33Q8WU49 177 aa4.79□□□□□ -1.64
MSH6-211ENST00000606499 LINC00167Q96N53 147 aa4.79□□□□□ -1.64
MSH6-211ENST00000606499 IGKV2-28A0A075B6P5 120 aa4.78□□□□□ -1.64
MSH6-211ENST00000606499 RPL37AP8A6NKH3 93 aa4.78□□□□□ -1.64
MSH6-211ENST00000606499 M0R378 163 aa4.78□□□□□ -1.64
MSH6-211ENST00000606499 NDUFC2O95298 119 aa4.78□□□□□ -1.64
MSH6-211ENST00000606499 IGKV2D-28P01615 120 aa4.78□□□□□ -1.64
MSH6-211ENST00000606499 UBE2BP63146 152 aa4.78□□□□□ -1.64
MSH6-211ENST00000606499 HNRNPA3P51991 378 aaKnown RBP4.77□□□□□ -1.65
MSH6-211ENST00000606499 LBHQ53QV2 105 aaPredicted RBP4.77□□□□□ -1.65
MSH6-211ENST00000606499 COPS9Q8WXC6 57 aa4.77□□□□□ -1.65
MSH6-211ENST00000606499 PPDPFQ9H3Y8 114 aa4.77□□□□□ -1.65
MSH6-211ENST00000606499 IGLV1-50A0A075B6I6 118 aa4.76□□□□□ -1.65
MSH6-211ENST00000606499 TRBV10-3A0A0K0K1G6 114 aa4.76□□□□□ -1.65
MSH6-211ENST00000606499 TRBV10-2A0A0K0K1G8 114 aa4.76□□□□□ -1.65
MSH6-211ENST00000606499 A4D1N5 150 aa4.76□□□□□ -1.65
MSH6-211ENST00000606499 TSTD3H0UI37 97 aa4.76□□□□□ -1.65
MSH6-211ENST00000606499 Q5VSD8 79 aa4.76□□□□□ -1.65
MSH6-211ENST00000606499 LINC00337Q8N6G1 96 aa4.76□□□□□ -1.65
MSH6-211ENST00000606499 PSORS1C2Q9UIG4 136 aa4.76□□□□□ -1.65
MSH6-211ENST00000606499 ABCA13Q86UQ4 5058 aa4.75□□□□□ -1.65
MSH6-211ENST00000606499 FAM229AH3BQW9 127 aa4.75□□□□□ -1.65
MSH6-211ENST00000606499 DDTP30046 118 aa4.75□□□□□ -1.65
MSH6-211ENST00000606499 KRTAP10-4P60372 401 aaPredicted RBP4.75□□□□□ -1.65
MSH6-211ENST00000606499 RPL37AP61513 92 aaKnown RBP4.75□□□□□ -1.65
MSH6-211ENST00000606499 HSD52Q0P140 79 aa4.75□□□□□ -1.65
MSH6-211ENST00000606499 TAL2Q16559 108 aa4.75□□□□□ -1.65
MSH6-211ENST00000606499 CEND1Q8N111 149 aa4.75□□□□□ -1.65
MSH6-211ENST00000606499 Q8N1X5 172 aa4.75□□□□□ -1.65
MSH6-211ENST00000606499 PKHD1L1Q86WI1 4243 aa4.74□□□□□ -1.65
MSH6-211ENST00000606499 IGLV6-57P01721 117 aa4.74□□□□□ -1.65
MSH6-211ENST00000606499 FXYD2P54710 66 aa4.74□□□□□ -1.65
MSH6-211ENST00000606499 S100A7L2Q5SY68 101 aa4.74□□□□□ -1.65
MSH6-211ENST00000606499 OR13C6PQ8NH95 151 aa4.74□□□□□ -1.65
MSH6-211ENST00000606499 A6NDN8 102 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms