RNA–Protein interactions for RNA: ENST00000605457.5

TUBE1-211, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 1,645 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-211ENST00000605457 HERV-K104P63124 156 aa8.76□□□□□ -1.01
TUBE1-211ENST00000605457 KRTAP29-1A8MX34 341 aaPredicted RBP8.75□□□□□ -1.01
TUBE1-211ENST00000605457 J3QQQ9 107 aa8.75□□□□□ -1.01
TUBE1-211ENST00000605457 UBE2BP63146 152 aa8.75□□□□□ -1.01
TUBE1-211ENST00000605457 IGLV5-37A0A075B6J1 123 aa8.74□□□□□ -1.01
TUBE1-211ENST00000605457 MYMXA0A1B0GTQ4 84 aa8.74□□□□□ -1.01
TUBE1-211ENST00000605457 KRTDAPP60985 99 aa8.74□□□□□ -1.01
TUBE1-211ENST00000605457 C1orf137Q5JT78 98 aa8.74□□□□□ -1.01
TUBE1-211ENST00000605457 MRPL55Q7Z7F7 128 aaKnown RBP8.74□□□□□ -1.01
TUBE1-211ENST00000605457 LINC00158P58513 81 aa8.73□□□□□ -1.01
TUBE1-211ENST00000605457 LBHQ53QV2 105 aaPredicted RBP8.73□□□□□ -1.01
TUBE1-211ENST00000605457 A0A0U1RRA0 63 aa8.72□□□□□ -1.01
TUBE1-211ENST00000605457 E9PLD3 99 aa8.72□□□□□ -1.01
TUBE1-211ENST00000605457 SMIM13P0DJ93 91 aa8.72□□□□□ -1.01
TUBE1-211ENST00000605457 SRSF9Q13242 221 aaKnown RBP eCLIP8.72□□□□□ -1.01
TUBE1-211ENST00000605457 MEIG1Q5JSS6 88 aa8.72□□□□□ -1.01
TUBE1-211ENST00000605457 HERC1Q15751 4861 aa8.72□□□□□ -1.01
TUBE1-211ENST00000605457 OXTP01178 125 aa8.72□□□□□ -1.01
TUBE1-211ENST00000605457 LGALS3P17931 250 aaKnown RBP8.72□□□□□ -1.01
TUBE1-211ENST00000605457 NMUP48645 174 aa8.72□□□□□ -1.01
TUBE1-211ENST00000605457 SPINK6Q6UWN8 80 aa8.72□□□□□ -1.01
TUBE1-211ENST00000605457 HIST3H2BBQ8N257 126 aa8.72□□□□□ -1.01
TUBE1-211ENST00000605457 LINC00587B1AMM8 73 aa8.71□□□□□ -1.02
TUBE1-211ENST00000605457 VPREB1P12018 145 aa8.71□□□□□ -1.02
TUBE1-211ENST00000605457 NKAPP1Q8N9T2 125 aa8.71□□□□□ -1.02
TUBE1-211ENST00000605457 LINC00167Q96N53 147 aa8.71□□□□□ -1.02
TUBE1-211ENST00000605457 IGLV7-43P04211 117 aa8.7□□□□□ -1.02
TUBE1-211ENST00000605457 MIR7-3HGQ8N6C7 128 aa8.7□□□□□ -1.02
TUBE1-211ENST00000605457 Q8NDZ9 215 aa8.7□□□□□ -1.02
TUBE1-211ENST00000605457 HIST1H2BLQ99880 126 aa8.69□□□□□ -1.02
TUBE1-211ENST00000605457 C20orf202A1L168 122 aa8.69□□□□□ -1.02
TUBE1-211ENST00000605457 GAGE10A6NGK3 116 aa8.69□□□□□ -1.02
TUBE1-211ENST00000605457 J3QL48 77 aa8.69□□□□□ -1.02
TUBE1-211ENST00000605457 S100A6P06703 90 aa8.69□□□□□ -1.02
TUBE1-211ENST00000605457 RPL24P83731 157 aaKnown RBP8.69□□□□□ -1.02
TUBE1-211ENST00000605457 RPL37AP8A6NKH3 93 aa8.68□□□□□ -1.02
TUBE1-211ENST00000605457 S100A2P29034 98 aa8.68□□□□□ -1.02
TUBE1-211ENST00000605457 IGKV2D-26A0A0A0MRZ7 120 aa8.66□□□□□ -1.02
TUBE1-211ENST00000605457 DAND5Q8N907 189 aa8.65□□□□□ -1.02
TUBE1-211ENST00000605457 TNXBP22105 4242 aa8.65□□□□□ -1.02
TUBE1-211ENST00000605457 IGKV2-28A0A075B6P5 120 aa8.65□□□□□ -1.03
TUBE1-211ENST00000605457 A0A0J9YXY3 114 aa8.65□□□□□ -1.03
TUBE1-211ENST00000605457 IGKV2D-28P01615 120 aa8.65□□□□□ -1.03
TUBE1-211ENST00000605457 SNRPEP62304 92 aaKnown RBP8.65□□□□□ -1.03
TUBE1-211ENST00000605457 BOD1L2Q8IYS8 172 aa8.65□□□□□ -1.03
TUBE1-211ENST00000605457 IGLV1-50A0A075B6I6 118 aa8.64□□□□□ -1.03
TUBE1-211ENST00000605457 REG3GQ6UW15 175 aa8.64□□□□□ -1.03
TUBE1-211ENST00000605457 ATOH7Q8N100 152 aa8.64□□□□□ -1.03
TUBE1-211ENST00000605457 LOC107984156A0A0G2JMH3 177 aa8.63□□□□□ -1.03
TUBE1-211ENST00000605457 BCE1O60756 84 aa8.63□□□□□ -1.03
TUBE1-211ENST00000605457 MT1HL1P0DM35 61 aa8.63□□□□□ -1.03
TUBE1-211ENST00000605457 AKR1D1P51857 326 aa8.63□□□□□ -1.03
TUBE1-211ENST00000605457 ARL17AQ8IVW1 177 aa8.63□□□□□ -1.03
TUBE1-211ENST00000605457 DIRC1Q969H9 104 aa8.63□□□□□ -1.03
TUBE1-211ENST00000605457 C5orf52A6NGY3 159 aa8.62□□□□□ -1.03
TUBE1-211ENST00000605457 H0Y9J4 135 aa8.62□□□□□ -1.03
TUBE1-211ENST00000605457 ANKRD39Q53RE8 183 aa8.62□□□□□ -1.03
TUBE1-211ENST00000605457 LINC01600Q96MT4 127 aa8.62□□□□□ -1.03
TUBE1-211ENST00000605457 TTTY13Q9BZ97 58 aa8.62□□□□□ -1.03
TUBE1-211ENST00000605457 ZNF815PA8K554 130 aa8.62□□□□□ -1.03
TUBE1-211ENST00000605457 ZNF861PO60384 105 aa8.62□□□□□ -1.03
TUBE1-211ENST00000605457 M0R378 163 aa8.61□□□□□ -1.03
TUBE1-211ENST00000605457 ADAMTSL4-AS1Q5T5F5 129 aa8.61□□□□□ -1.03
TUBE1-211ENST00000605457 LITAFQ99732 161 aa8.61□□□□□ -1.03
TUBE1-211ENST00000605457 NCR3O14931 201 aa8.6□□□□□ -1.03
TUBE1-211ENST00000605457 MIEN1Q9BRT3 115 aa8.59□□□□□ -1.03
TUBE1-211ENST00000605457 TMEM126AQ9H061 195 aa8.59□□□□□ -1.03
TUBE1-211ENST00000605457 TMEM238C9JI98 176 aa8.58□□□□□ -1.04
TUBE1-211ENST00000605457 TIMM17BO60830 172 aa8.58□□□□□ -1.04
TUBE1-211ENST00000605457 RPL28P46779 137 aaKnown RBP8.58□□□□□ -1.04
TUBE1-211ENST00000605457 SOSTDC1Q6X4U4 206 aa8.58□□□□□ -1.04
TUBE1-211ENST00000605457 KRTAP13-1Q8IUC0 172 aa8.58□□□□□ -1.04
TUBE1-211ENST00000605457 EIF4EBP3O60516 100 aaPredicted RBP8.58□□□□□ -1.04
TUBE1-211ENST00000605457 NPC2P61916 151 aa8.57□□□□□ -1.04
TUBE1-211ENST00000605457 NDUFC2O95298 119 aa8.56□□□□□ -1.04
TUBE1-211ENST00000605457 KRTAP1-4P0C5Y4 121 aa8.56□□□□□ -1.04
TUBE1-211ENST00000605457 TRBV10-2A0A0K0K1G8 114 aa8.55□□□□□ -1.04
TUBE1-211ENST00000605457 UBE2AP49459 152 aa8.55□□□□□ -1.04
TUBE1-211ENST00000605457 PCP2Q8IVA1 136 aa8.55□□□□□ -1.04
TUBE1-211ENST00000605457 SPANXB1Q9NS25 103 aaPredicted RBP8.55□□□□□ -1.04
TUBE1-211ENST00000605457 TRBV10-3A0A0K0K1G6 114 aa8.54□□□□□ -1.04
TUBE1-211ENST00000605457 PRYO14603 147 aa8.54□□□□□ -1.04
TUBE1-211ENST00000605457 KRTAP10-8P60410 259 aa8.54□□□□□ -1.04
TUBE1-211ENST00000605457 FAM19A1Q7Z5A9 133 aa8.54□□□□□ -1.04
TUBE1-211ENST00000605457 LINC00308Q8TCZ7 52 aa8.54□□□□□ -1.04
TUBE1-211ENST00000605457 PRLHP81277 87 aa8.54□□□□□ -1.04
TUBE1-211ENST00000605457 SCGB1D4Q6XE38 83 aa8.54□□□□□ -1.04
TUBE1-211ENST00000605457 KCNQ1DNQ9H478 68 aa8.54□□□□□ -1.04
TUBE1-211ENST00000605457 HSBP1L1C9JCN9 74 aa8.52□□□□□ -1.05
TUBE1-211ENST00000605457 SCGB1D1O95968 90 aa8.52□□□□□ -1.05
TUBE1-211ENST00000605457 SPRR1AP35321 89 aa8.52□□□□□ -1.05
TUBE1-211ENST00000605457 SPANXDQ9BXN6 97 aa8.52□□□□□ -1.05
TUBE1-211ENST00000605457 SPANXCQ9NY87 97 aa8.52□□□□□ -1.05
TUBE1-211ENST00000605457 DDTP30046 118 aa8.51□□□□□ -1.05
TUBE1-211ENST00000605457 KRTAP4-16G5E9R7 235 aaPredicted RBP8.51□□□□□ -1.05
TUBE1-211ENST00000605457 IGLV6-57P01721 117 aa8.51□□□□□ -1.05
TUBE1-211ENST00000605457 LINC00337Q8N6G1 96 aa8.51□□□□□ -1.05
TUBE1-211ENST00000605457 PRR26Q8N8Z3 221 aa8.51□□□□□ -1.05
TUBE1-211ENST00000605457 S100A7L2Q5SY68 101 aa8.49□□□□□ -1.05
TUBE1-211ENST00000605457 S100A12P80511 92 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms