RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 PRR3P79522 188 aaKnown RBP8.62□□□□□ -1.03
RNF40-212ENST00000602784 LBHQ53QV2 105 aaPredicted RBP8.62□□□□□ -1.03
RNF40-212ENST00000602784 C22orf24Q9Y442 160 aa8.62□□□□□ -1.03
RNF40-212ENST00000602784 IGKV2D-26A0A0A0MRZ7 120 aa8.6□□□□□ -1.03
RNF40-212ENST00000602784 A0A0U1RRA0 63 aa8.6□□□□□ -1.03
RNF40-212ENST00000602784 RPL24P83731 157 aaKnown RBP8.6□□□□□ -1.03
RNF40-212ENST00000602784 MRPL55Q7Z7F7 128 aaKnown RBP8.6□□□□□ -1.03
RNF40-212ENST00000602784 ATOH7Q8N100 152 aa8.6□□□□□ -1.03
RNF40-212ENST00000602784 MIR7-3HGQ8N6C7 128 aa8.6□□□□□ -1.03
RNF40-212ENST00000602784 LOC107984156A0A0G2JMH3 177 aa8.59□□□□□ -1.03
RNF40-212ENST00000602784 A0A0J9YXY3 114 aa8.59□□□□□ -1.03
RNF40-212ENST00000602784 VPREB1P12018 145 aa8.59□□□□□ -1.03
RNF40-212ENST00000602784 ARL17AQ8IVW1 177 aa8.59□□□□□ -1.03
RNF40-212ENST00000602784 NKAPP1Q8N9T2 125 aa8.59□□□□□ -1.03
RNF40-212ENST00000602784 PSORS1C2Q9UIG4 136 aa8.59□□□□□ -1.03
RNF40-212ENST00000602784 ABCA13Q86UQ4 5058 aa8.59□□□□□ -1.03
RNF40-212ENST00000602784 UBE2BP63146 152 aa8.58□□□□□ -1.04
RNF40-212ENST00000602784 ANKRD39Q53RE8 183 aa8.58□□□□□ -1.04
RNF40-212ENST00000602784 PCLOQ9Y6V0 5065 aa8.57□□□□□ -1.04
RNF40-212ENST00000602784 ZNF815PA8K554 130 aa8.57□□□□□ -1.04
RNF40-212ENST00000602784 TIMM17BO60830 172 aa8.57□□□□□ -1.04
RNF40-212ENST00000602784 SCGB1D1O95968 90 aa8.57□□□□□ -1.04
RNF40-212ENST00000602784 KRTAP11-1Q8IUC1 163 aa8.57□□□□□ -1.04
RNF40-212ENST00000602784 LINC00167Q96N53 147 aa8.57□□□□□ -1.04
RNF40-212ENST00000602784 HSBP1L1C9JCN9 74 aa8.56□□□□□ -1.04
RNF40-212ENST00000602784 FLG2Q5D862 2391 aaPredicted RBP8.55□□□□□ -1.04
RNF40-212ENST00000602784 HNRNPA3P51991 378 aaKnown RBP8.55□□□□□ -1.04
RNF40-212ENST00000602784 BOD1L2Q8IYS8 172 aa8.55□□□□□ -1.04
RNF40-212ENST00000602784 Q8NDZ9 215 aa8.55□□□□□ -1.04
RNF40-212ENST00000602784 TTTY13Q9BZ97 58 aa8.55□□□□□ -1.04
RNF40-212ENST00000602784 SRSF9Q13242 221 aaKnown RBP eCLIP8.54□□□□□ -1.04
RNF40-212ENST00000602784 C1orf137Q5JT78 98 aa8.54□□□□□ -1.04
RNF40-212ENST00000602784 ADAMTSL4-AS1Q5T5F5 129 aa8.54□□□□□ -1.04
RNF40-212ENST00000602784 DAND5Q8N907 189 aa8.54□□□□□ -1.04
RNF40-212ENST00000602784 LITAFQ99732 161 aa8.54□□□□□ -1.04
RNF40-212ENST00000602784 TMA7Q9Y2S6 64 aaKnown RBP8.53□□□□□ -1.04
RNF40-212ENST00000602784 GAGE10A6NGK3 116 aa8.52□□□□□ -1.05
RNF40-212ENST00000602784 RPL37AP8A6NKH3 93 aa8.52□□□□□ -1.05
RNF40-212ENST00000602784 M0R378 163 aa8.52□□□□□ -1.05
RNF40-212ENST00000602784 IGLV7-43P04211 117 aa8.52□□□□□ -1.05
RNF40-212ENST00000602784 SPINK6Q6UWN8 80 aa8.52□□□□□ -1.05
RNF40-212ENST00000602784 PCP2Q8IVA1 136 aa8.52□□□□□ -1.05
RNF40-212ENST00000602784 MIEN1Q9BRT3 115 aa8.52□□□□□ -1.05
RNF40-212ENST00000602784 IGLV1-50A0A075B6I6 118 aa8.51□□□□□ -1.05
RNF40-212ENST00000602784 NDUFC2O95298 119 aa8.51□□□□□ -1.05
RNF40-212ENST00000602784 JOSD1Q15040 202 aaPredicted RBP8.51□□□□□ -1.05
RNF40-212ENST00000602784 SCGB1D4Q6XE38 83 aa8.51□□□□□ -1.05
RNF40-212ENST00000602784 TRBV10-2A0A0K0K1G8 114 aa8.5□□□□□ -1.05
RNF40-212ENST00000602784 TMEM238C9JI98 176 aa8.49□□□□□ -1.05
RNF40-212ENST00000602784 SOSTDC1Q6X4U4 206 aa8.49□□□□□ -1.05
RNF40-212ENST00000602784 Q6ZVH6 145 aa8.49□□□□□ -1.05
RNF40-212ENST00000602784 LINC00308Q8TCZ7 52 aa8.49□□□□□ -1.05
RNF40-212ENST00000602784 IGKV2-28A0A075B6P5 120 aa8.48□□□□□ -1.05
RNF40-212ENST00000602784 BCE1O60756 84 aa8.48□□□□□ -1.05
RNF40-212ENST00000602784 IGKV2D-28P01615 120 aa8.48□□□□□ -1.05
RNF40-212ENST00000602784 SPANXDQ9BXN6 97 aa8.48□□□□□ -1.05
RNF40-212ENST00000602784 PPDPFQ9H3Y8 114 aa8.48□□□□□ -1.05
RNF40-212ENST00000602784 SPANXB1Q9NS25 103 aaPredicted RBP8.48□□□□□ -1.05
RNF40-212ENST00000602784 SPANXCQ9NY87 97 aa8.48□□□□□ -1.05
RNF40-212ENST00000602784 PKHD1L1Q86WI1 4243 aa8.48□□□□□ -1.05
RNF40-212ENST00000602784 EIF4EBP3O60516 100 aaPredicted RBP8.47□□□□□ -1.05
RNF40-212ENST00000602784 OXTP01178 125 aa8.47□□□□□ -1.05
RNF40-212ENST00000602784 COPS9Q8WXC6 57 aa8.47□□□□□ -1.05
RNF40-212ENST00000602784 KRTAP29-1A8MX34 341 aaPredicted RBP8.46□□□□□ -1.06
RNF40-212ENST00000602784 NCR3O14931 201 aa8.46□□□□□ -1.06
RNF40-212ENST00000602784 ZNF861PO60384 105 aa8.46□□□□□ -1.06
RNF40-212ENST00000602784 IFITM1P13164 125 aa8.46□□□□□ -1.06
RNF40-212ENST00000602784 DIRC1Q969H9 104 aa8.46□□□□□ -1.06
RNF40-212ENST00000602784 MYCBP2O75592 4640 aa8.45□□□□□ -1.06
RNF40-212ENST00000602784 NPC2P61916 151 aa8.45□□□□□ -1.06
RNF40-212ENST00000602784 REG3GQ6UW15 175 aa8.45□□□□□ -1.06
RNF40-212ENST00000602784 TMEM126AQ9H061 195 aa8.45□□□□□ -1.06
RNF40-212ENST00000602784 KCNQ1DNQ9H478 68 aa8.45□□□□□ -1.06
RNF40-212ENST00000602784 DLEU1O43261 78 aa8.44□□□□□ -1.06
RNF40-212ENST00000602784 COX8AP10176 69 aa8.44□□□□□ -1.06
RNF40-212ENST00000602784 RPL28P46779 137 aaKnown RBP8.44□□□□□ -1.06
RNF40-212ENST00000602784 VAMP8Q9BV40 100 aa8.44□□□□□ -1.06
RNF40-212ENST00000602784 TRBV10-3A0A0K0K1G6 114 aa8.43□□□□□ -1.06
RNF40-212ENST00000602784 PRYO14603 147 aa8.43□□□□□ -1.06
RNF40-212ENST00000602784 IGLV6-57P01721 117 aa8.43□□□□□ -1.06
RNF40-212ENST00000602784 KRTAP13-1Q8IUC0 172 aa8.43□□□□□ -1.06
RNF40-212ENST00000602784 DMBT1Q9UGM3 2413 aaPredicted RBP8.42□□□□□ -1.06
RNF40-212ENST00000602784 H0Y9J4 135 aa8.42□□□□□ -1.06
RNF40-212ENST00000602784 DDTP30046 118 aa8.42□□□□□ -1.06
RNF40-212ENST00000602784 S100A12P80511 92 aa8.42□□□□□ -1.06
RNF40-212ENST00000602784 SPATA45Q537H7 98 aa8.42□□□□□ -1.06
RNF40-212ENST00000602784 PYY3Q5JQD4 70 aa8.42□□□□□ -1.06
RNF40-212ENST00000602784 LINC00518Q8N0U6 118 aa8.42□□□□□ -1.06
RNF40-212ENST00000602784 PAM16Q9Y3D7 125 aa8.42□□□□□ -1.06
RNF40-212ENST00000602784 SPRR1AP35321 89 aa8.41□□□□□ -1.06
RNF40-212ENST00000602784 S100A7L2Q5SY68 101 aa8.41□□□□□ -1.06
RNF40-212ENST00000602784 UBE2AP49459 152 aa8.4□□□□□ -1.06
RNF40-212ENST00000602784 MUSTN1Q8IVN3 82 aa8.4□□□□□ -1.06
RNF40-212ENST00000602784 LINC00337Q8N6G1 96 aa8.4□□□□□ -1.06
RNF40-212ENST00000602784 LINC01600Q96MT4 127 aa8.4□□□□□ -1.06
RNF40-212ENST00000602784 CBY1Q9Y3M2 126 aa8.4□□□□□ -1.06
RNF40-212ENST00000602784 KRTAP4-16G5E9R7 235 aaPredicted RBP8.39□□□□□ -1.07
RNF40-212ENST00000602784 FAM19A1Q7Z5A9 133 aa8.39□□□□□ -1.07
RNF40-212ENST00000602784 J3QL48 77 aa8.38□□□□□ -1.07
RNF40-212ENST00000602784 C14orf144Q96I85 54 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms