RNA–Protein interactions for RNA: ENST00000600610.5

GTPBP3-221, Transcript of GTP binding protein 3, mitochondrial, humanhuman

TSL 1 (best)

Gene GTPBP3, Length 1,105 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTPBP3-221ENST00000600610 TIMM17BO60830 172 aa12.96□□□□□ -0.33
GTPBP3-221ENST00000600610 JOSD1Q15040 202 aaPredicted RBP12.96□□□□□ -0.33
GTPBP3-221ENST00000600610 ANKRD39Q53RE8 183 aa12.96□□□□□ -0.33
GTPBP3-221ENST00000600610 ARL17AQ8IVW1 177 aa12.96□□□□□ -0.33
GTPBP3-221ENST00000600610 FAM168BA1KXE4 195 aa12.95□□□□□ -0.34
GTPBP3-221ENST00000600610 ZNF815PA8K554 130 aa12.95□□□□□ -0.34
GTPBP3-221ENST00000600610 INAFM2P0DMQ5 153 aa12.95□□□□□ -0.34
GTPBP3-221ENST00000600610 FAM19A5Q7Z5A7 132 aaPredicted RBP12.95□□□□□ -0.34
GTPBP3-221ENST00000600610 VPS13BQ7Z7G8 4022 aa12.94□□□□□ -0.34
GTPBP3-221ENST00000600610 MIR7-3HGQ8N6C7 128 aa12.94□□□□□ -0.34
GTPBP3-221ENST00000600610 M0QXV9 152 aa12.93□□□□□ -0.34
GTPBP3-221ENST00000600610 KRTAP7-1Q8IUC3 87 aa12.93□□□□□ -0.34
GTPBP3-221ENST00000600610 C22orf24Q9Y442 160 aa12.93□□□□□ -0.34
GTPBP3-221ENST00000600610 RPL37AP61513 92 aaKnown RBP12.92□□□□□ -0.34
GTPBP3-221ENST00000600610 A0A0U1RRA0 63 aa12.91□□□□□ -0.34
GTPBP3-221ENST00000600610 SERTAD4-AS1Q5TG53 156 aa12.91□□□□□ -0.34
GTPBP3-221ENST00000600610 NKAPP1Q8N9T2 125 aa12.91□□□□□ -0.34
GTPBP3-221ENST00000600610 PHF5AQ7RTV0 110 aaKnown RBP12.9□□□□□ -0.34
GTPBP3-221ENST00000600610 MRPL55Q7Z7F7 128 aaKnown RBP12.9□□□□□ -0.34
GTPBP3-221ENST00000600610 SRRM2Q9UQ35 2752 aaKnown RBP12.88□□□□□ -0.35
GTPBP3-221ENST00000600610 VPREB1P12018 145 aa12.88□□□□□ -0.35
GTPBP3-221ENST00000600610 SCGB1D4Q6XE38 83 aa12.88□□□□□ -0.35
GTPBP3-221ENST00000600610 Q6ZVH6 145 aa12.88□□□□□ -0.35
GTPBP3-221ENST00000600610 MIEN1Q9BRT3 115 aa12.88□□□□□ -0.35
GTPBP3-221ENST00000600610 TMEM238C9JI98 176 aa12.87□□□□□ -0.35
GTPBP3-221ENST00000600610 COPS9Q8WXC6 57 aa12.87□□□□□ -0.35
GTPBP3-221ENST00000600610 PPDPFQ9H3Y8 114 aa12.87□□□□□ -0.35
GTPBP3-221ENST00000600610 KRTAP10-4P60372 401 aaPredicted RBP12.86□□□□□ -0.35
GTPBP3-221ENST00000600610 UBE2BP63146 152 aa12.86□□□□□ -0.35
GTPBP3-221ENST00000600610 PCP2Q8IVA1 136 aa12.86□□□□□ -0.35
GTPBP3-221ENST00000600610 LITAFQ99732 161 aa12.86□□□□□ -0.35
GTPBP3-221ENST00000600610 TTTY13Q9BZ97 58 aa12.86□□□□□ -0.35
GTPBP3-221ENST00000600610 NDUFC2O95298 119 aa12.85□□□□□ -0.35
GTPBP3-221ENST00000600610 PRR3P79522 188 aaKnown RBP12.85□□□□□ -0.35
GTPBP3-221ENST00000600610 ADAMTSL4-AS1Q5T5F5 129 aa12.85□□□□□ -0.35
GTPBP3-221ENST00000600610 BOD1L2Q8IYS8 172 aa12.85□□□□□ -0.35
GTPBP3-221ENST00000600610 M0R378 163 aa12.83□□□□□ -0.36
GTPBP3-221ENST00000600610 LINC00167Q96N53 147 aa12.83□□□□□ -0.36
GTPBP3-221ENST00000600610 VAMP8Q9BV40 100 aa12.83□□□□□ -0.36
GTPBP3-221ENST00000600610 SPANXDQ9BXN6 97 aa12.83□□□□□ -0.36
GTPBP3-221ENST00000600610 SPANXCQ9NY87 97 aa12.83□□□□□ -0.36
GTPBP3-221ENST00000600610 TRBV10-2A0A0K0K1G8 114 aa12.82□□□□□ -0.36
GTPBP3-221ENST00000600610 DLEU1O43261 78 aa12.82□□□□□ -0.36
GTPBP3-221ENST00000600610 IFITM1P13164 125 aa12.82□□□□□ -0.36
GTPBP3-221ENST00000600610 DAND5Q8N907 189 aa12.82□□□□□ -0.36
GTPBP3-221ENST00000600610 PSORS1C2Q9UIG4 136 aa12.82□□□□□ -0.36
GTPBP3-221ENST00000600610 COX8AP10176 69 aa12.81□□□□□ -0.36
GTPBP3-221ENST00000600610 PYY3Q5JQD4 70 aa12.8□□□□□ -0.36
GTPBP3-221ENST00000600610 LINC00308Q8TCZ7 52 aa12.8□□□□□ -0.36
GTPBP3-221ENST00000600610 IGLV1-50A0A075B6I6 118 aa12.78□□□□□ -0.36
GTPBP3-221ENST00000600610 SPATA45Q537H7 98 aa12.78□□□□□ -0.36
GTPBP3-221ENST00000600610 SPANXB1Q9NS25 103 aaPredicted RBP12.78□□□□□ -0.36
GTPBP3-221ENST00000600610 C1orf137Q5JT78 98 aa12.77□□□□□ -0.37
GTPBP3-221ENST00000600610 Q8NDZ9 215 aa12.77□□□□□ -0.37
GTPBP3-221ENST00000600610 LINC00518Q8N0U6 118 aa12.76□□□□□ -0.37
GTPBP3-221ENST00000600610 PAM16Q9Y3D7 125 aa12.76□□□□□ -0.37
GTPBP3-221ENST00000600610 S100A12P80511 92 aa12.75□□□□□ -0.37
GTPBP3-221ENST00000600610 SOSTDC1Q6X4U4 206 aa12.75□□□□□ -0.37
GTPBP3-221ENST00000600610 KRTAP11-1Q8IUC1 163 aa12.75□□□□□ -0.37
GTPBP3-221ENST00000600610 CBY1Q9Y3M2 126 aa12.75□□□□□ -0.37
GTPBP3-221ENST00000600610 FLG2Q5D862 2391 aaPredicted RBP12.74□□□□□ -0.37
GTPBP3-221ENST00000600610 RPL37AP8A6NKH3 93 aa12.74□□□□□ -0.37
GTPBP3-221ENST00000600610 SPINK6Q6UWN8 80 aa12.74□□□□□ -0.37
GTPBP3-221ENST00000600610 GAGE10A6NGK3 116 aa12.73□□□□□ -0.37
GTPBP3-221ENST00000600610 IGLV7-43P04211 117 aa12.73□□□□□ -0.37
GTPBP3-221ENST00000600610 SRSF9Q13242 221 aaKnown RBP eCLIP12.72□□□□□ -0.37
GTPBP3-221ENST00000600610 SLC25A34Q6PIV7 304 aa12.72□□□□□ -0.37
GTPBP3-221ENST00000600610 BCE1O60756 84 aa12.71□□□□□ -0.37
GTPBP3-221ENST00000600610 NPC2P61916 151 aa12.71□□□□□ -0.37
GTPBP3-221ENST00000600610 HIGD1BQ9P298 99 aa12.71□□□□□ -0.37
GTPBP3-221ENST00000600610 IGKV2-28A0A075B6P5 120 aa12.7□□□□□ -0.38
GTPBP3-221ENST00000600610 PRYO14603 147 aa12.7□□□□□ -0.38
GTPBP3-221ENST00000600610 NCR3O14931 201 aa12.7□□□□□ -0.38
GTPBP3-221ENST00000600610 IGKV2D-28P01615 120 aa12.7□□□□□ -0.38
GTPBP3-221ENST00000600610 KCNQ1DNQ9H478 68 aa12.7□□□□□ -0.38
GTPBP3-221ENST00000600610 EIF4EBP3O60516 100 aaPredicted RBP12.69□□□□□ -0.38
GTPBP3-221ENST00000600610 REG3GQ6UW15 175 aa12.69□□□□□ -0.38
GTPBP3-221ENST00000600610 C14orf144Q96I85 54 aa12.69□□□□□ -0.38
GTPBP3-221ENST00000600610 DDTP30046 118 aa12.68□□□□□ -0.38
GTPBP3-221ENST00000600610 S100A7L2Q5SY68 101 aa12.68□□□□□ -0.38
GTPBP3-221ENST00000600610 MUSTN1Q8IVN3 82 aa12.68□□□□□ -0.38
GTPBP3-221ENST00000600610 TMEM126AQ9H061 195 aa12.68□□□□□ -0.38
GTPBP3-221ENST00000600610 KRTAP29-1A8MX34 341 aaPredicted RBP12.67□□□□□ -0.38
GTPBP3-221ENST00000600610 IGLV6-57P01721 117 aa12.67□□□□□ -0.38
GTPBP3-221ENST00000600610 TRBV10-3A0A0K0K1G6 114 aa12.66□□□□□ -0.38
GTPBP3-221ENST00000600610 ZNF861PO60384 105 aa12.66□□□□□ -0.38
GTPBP3-221ENST00000600610 RPL28P46779 137 aaKnown RBP12.66□□□□□ -0.38
GTPBP3-221ENST00000600610 PKHD1L1Q86WI1 4243 aa12.65□□□□□ -0.38
GTPBP3-221ENST00000600610 HNRNPA3P51991 378 aaKnown RBP12.65□□□□□ -0.38
GTPBP3-221ENST00000600610 DIRC1Q969H9 104 aa12.65□□□□□ -0.38
GTPBP3-221ENST00000600610 MYCBP2O75592 4640 aa12.65□□□□□ -0.39
GTPBP3-221ENST00000600610 H0Y9J4 135 aa12.64□□□□□ -0.39
GTPBP3-221ENST00000600610 OXTP01178 125 aa12.64□□□□□ -0.39
GTPBP3-221ENST00000600610 SPRR1AP35321 89 aa12.64□□□□□ -0.39
GTPBP3-221ENST00000600610 LINC00337Q8N6G1 96 aa12.64□□□□□ -0.39
GTPBP3-221ENST00000600610 SMIM6P0DI80 62 aa12.63□□□□□ -0.39
GTPBP3-221ENST00000600610 TAL2Q16559 108 aa12.63□□□□□ -0.39
GTPBP3-221ENST00000600610 HIST1H4GQ99525 98 aa12.63□□□□□ -0.39
GTPBP3-221ENST00000600610 TRAV13-2A0A0B4J235 113 aa12.6□□□□□ -0.39
GTPBP3-221ENST00000600610 J3QL48 77 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms