RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 A0A0U1RRA0 63 aa8.5□□□□□ -1.05
VRK3-219ENST00000600137 NMUP48645 174 aa8.5□□□□□ -1.05
VRK3-219ENST00000600137 ANKRD39Q53RE8 183 aa8.5□□□□□ -1.05
VRK3-219ENST00000600137 ATOH7Q8N100 152 aa8.5□□□□□ -1.05
VRK3-219ENST00000600137 C7orf33Q8WU49 177 aa8.5□□□□□ -1.05
VRK3-219ENST00000600137 IGLV5-37A0A075B6J1 123 aa8.49□□□□□ -1.05
VRK3-219ENST00000600137 C20orf202A1L168 122 aa8.49□□□□□ -1.05
VRK3-219ENST00000600137 LGALS3P17931 250 aaKnown RBP8.49□□□□□ -1.05
VRK3-219ENST00000600137 LINC00158P58513 81 aa8.49□□□□□ -1.05
VRK3-219ENST00000600137 TTTY13Q9BZ97 58 aa8.49□□□□□ -1.05
VRK3-219ENST00000600137 M0QXV9 152 aa8.48□□□□□ -1.05
VRK3-219ENST00000600137 INAFM2P0DMQ5 153 aa8.48□□□□□ -1.05
VRK3-219ENST00000600137 VPREB1P12018 145 aa8.48□□□□□ -1.05
VRK3-219ENST00000600137 PRR3P79522 188 aaKnown RBP8.48□□□□□ -1.05
VRK3-219ENST00000600137 TP73-AS1Q9UF72 201 aa8.48□□□□□ -1.05
VRK3-219ENST00000600137 PSORS1C2Q9UIG4 136 aa8.48□□□□□ -1.05
VRK3-219ENST00000600137 A0A0J9YXY3 114 aa8.47□□□□□ -1.05
VRK3-219ENST00000600137 MIR7-3HGQ8N6C7 128 aa8.47□□□□□ -1.05
VRK3-219ENST00000600137 LOC107984156A0A0G2JMH3 177 aa8.46□□□□□ -1.06
VRK3-219ENST00000600137 MEIG1Q5JSS6 88 aa8.46□□□□□ -1.06
VRK3-219ENST00000600137 ADAMTSL4-AS1Q5T5F5 129 aa8.46□□□□□ -1.06
VRK3-219ENST00000600137 ARL17AQ8IVW1 177 aa8.46□□□□□ -1.06
VRK3-219ENST00000600137 LITAFQ99732 161 aa8.46□□□□□ -1.06
VRK3-219ENST00000600137 LINC00587B1AMM8 73 aa8.45□□□□□ -1.06
VRK3-219ENST00000600137 SRSF9Q13242 221 aaKnown RBP eCLIP8.45□□□□□ -1.06
VRK3-219ENST00000600137 LINC00167Q96N53 147 aa8.45□□□□□ -1.06
VRK3-219ENST00000600137 EIF4EBP3O60516 100 aaPredicted RBP8.44□□□□□ -1.06
VRK3-219ENST00000600137 AKR1D1P51857 326 aa8.44□□□□□ -1.06
VRK3-219ENST00000600137 MRPL55Q7Z7F7 128 aaKnown RBP8.44□□□□□ -1.06
VRK3-219ENST00000600137 DAND5Q8N907 189 aa8.44□□□□□ -1.06
VRK3-219ENST00000600137 PCP2Q8IVA1 136 aa8.43□□□□□ -1.06
VRK3-219ENST00000600137 ZNF815PA8K554 130 aa8.42□□□□□ -1.06
VRK3-219ENST00000600137 LBHQ53QV2 105 aaPredicted RBP8.42□□□□□ -1.06
VRK3-219ENST00000600137 SOSTDC1Q6X4U4 206 aa8.42□□□□□ -1.06
VRK3-219ENST00000600137 GAGE10A6NGK3 116 aa8.4□□□□□ -1.06
VRK3-219ENST00000600137 RPL37AP8A6NKH3 93 aa8.4□□□□□ -1.06
VRK3-219ENST00000600137 TIMM17BO60830 172 aa8.4□□□□□ -1.06
VRK3-219ENST00000600137 SCGB1D1O95968 90 aa8.4□□□□□ -1.06
VRK3-219ENST00000600137 UBE2BP63146 152 aa8.4□□□□□ -1.06
VRK3-219ENST00000600137 RPL24P83731 157 aaKnown RBP8.4□□□□□ -1.06
VRK3-219ENST00000600137 C1orf137Q5JT78 98 aa8.4□□□□□ -1.06
VRK3-219ENST00000600137 TMA7Q9Y2S6 64 aaKnown RBP8.4□□□□□ -1.06
VRK3-219ENST00000600137 IGLV1-50A0A075B6I6 118 aa8.39□□□□□ -1.07
VRK3-219ENST00000600137 JOSD1Q15040 202 aaPredicted RBP8.39□□□□□ -1.07
VRK3-219ENST00000600137 BOD1L2Q8IYS8 172 aa8.39□□□□□ -1.07
VRK3-219ENST00000600137 NKAPP1Q8N9T2 125 aa8.39□□□□□ -1.07
VRK3-219ENST00000600137 IGLV7-43P04211 117 aa8.38□□□□□ -1.07
VRK3-219ENST00000600137 M0R378 163 aa8.37□□□□□ -1.07
VRK3-219ENST00000600137 SPINK6Q6UWN8 80 aa8.36□□□□□ -1.07
VRK3-219ENST00000600137 LINC00308Q8TCZ7 52 aa8.36□□□□□ -1.07
VRK3-219ENST00000600137 IGKV2-28A0A075B6P5 120 aa8.35□□□□□ -1.07
VRK3-219ENST00000600137 KRTAP29-1A8MX34 341 aaPredicted RBP8.35□□□□□ -1.07
VRK3-219ENST00000600137 NDUFC2O95298 119 aa8.35□□□□□ -1.07
VRK3-219ENST00000600137 IGKV2D-28P01615 120 aa8.35□□□□□ -1.07
VRK3-219ENST00000600137 NPC2P61916 151 aa8.35□□□□□ -1.07
VRK3-219ENST00000600137 PYY3Q5JQD4 70 aa8.34□□□□□ -1.07
VRK3-219ENST00000600137 KRTAP13-1Q8IUC0 172 aa8.34□□□□□ -1.07
VRK3-219ENST00000600137 SPANXDQ9BXN6 97 aa8.34□□□□□ -1.07
VRK3-219ENST00000600137 SPANXCQ9NY87 97 aa8.34□□□□□ -1.07
VRK3-219ENST00000600137 HERC1Q15751 4861 aa8.33□□□□□ -1.08
VRK3-219ENST00000600137 TRBV10-2A0A0K0K1G8 114 aa8.33□□□□□ -1.08
VRK3-219ENST00000600137 HSBP1L1C9JCN9 74 aa8.33□□□□□ -1.08
VRK3-219ENST00000600137 TMEM238C9JI98 176 aa8.33□□□□□ -1.08
VRK3-219ENST00000600137 NCR3O14931 201 aa8.33□□□□□ -1.08
VRK3-219ENST00000600137 BCE1O60756 84 aa8.33□□□□□ -1.08
VRK3-219ENST00000600137 TNXBP22105 4242 aa8.33□□□□□ -1.08
VRK3-219ENST00000600137 ZNF861PO60384 105 aa8.32□□□□□ -1.08
VRK3-219ENST00000600137 SCGB1D4Q6XE38 83 aa8.32□□□□□ -1.08
VRK3-219ENST00000600137 TMEM126AQ9H061 195 aa8.32□□□□□ -1.08
VRK3-219ENST00000600137 DMBT1Q9UGM3 2413 aaPredicted RBP8.31□□□□□ -1.08
VRK3-219ENST00000600137 TRBV10-3A0A0K0K1G6 114 aa8.31□□□□□ -1.08
VRK3-219ENST00000600137 OXTP01178 125 aa8.31□□□□□ -1.08
VRK3-219ENST00000600137 KCNQ1DNQ9H478 68 aa8.31□□□□□ -1.08
VRK3-219ENST00000600137 KRTAP4-16G5E9R7 235 aaPredicted RBP8.3□□□□□ -1.08
VRK3-219ENST00000600137 MT1HL1P0DM35 61 aa8.3□□□□□ -1.08
VRK3-219ENST00000600137 COX8AP10176 69 aa8.3□□□□□ -1.08
VRK3-219ENST00000600137 SPRR1AP35321 89 aa8.3□□□□□ -1.08
VRK3-219ENST00000600137 REG3GQ6UW15 175 aa8.3□□□□□ -1.08
VRK3-219ENST00000600137 MIEN1Q9BRT3 115 aa8.3□□□□□ -1.08
VRK3-219ENST00000600137 PPDPFQ9H3Y8 114 aa8.3□□□□□ -1.08
VRK3-219ENST00000600137 SPANXB1Q9NS25 103 aaPredicted RBP8.3□□□□□ -1.08
VRK3-219ENST00000600137 H0Y9J4 135 aa8.29□□□□□ -1.08
VRK3-219ENST00000600137 DLEU1O43261 78 aa8.29□□□□□ -1.08
VRK3-219ENST00000600137 IGLV6-57P01721 117 aa8.29□□□□□ -1.08
VRK3-219ENST00000600137 Q6ZVH6 145 aa8.29□□□□□ -1.08
VRK3-219ENST00000600137 MUSTN1Q8IVN3 82 aa8.29□□□□□ -1.08
VRK3-219ENST00000600137 PAM16Q9Y3D7 125 aa8.29□□□□□ -1.08
VRK3-219ENST00000600137 IFITM1P13164 125 aa8.28□□□□□ -1.08
VRK3-219ENST00000600137 SPATA45Q537H7 98 aa8.28□□□□□ -1.08
VRK3-219ENST00000600137 C14orf144Q96I85 54 aa8.28□□□□□ -1.08
VRK3-219ENST00000600137 LINC01600Q96MT4 127 aa8.28□□□□□ -1.08
VRK3-219ENST00000600137 PRYO14603 147 aa8.27□□□□□ -1.09
VRK3-219ENST00000600137 KRTAP1-4P0C5Y4 121 aa8.27□□□□□ -1.09
VRK3-219ENST00000600137 DDTP30046 118 aa8.27□□□□□ -1.09
VRK3-219ENST00000600137 DIRC1Q969H9 104 aa8.27□□□□□ -1.09
VRK3-219ENST00000600137 LINC00337Q8N6G1 96 aa8.26□□□□□ -1.09
VRK3-219ENST00000600137 VAMP8Q9BV40 100 aa8.26□□□□□ -1.09
VRK3-219ENST00000600137 RPL28P46779 137 aaKnown RBP8.25□□□□□ -1.09
VRK3-219ENST00000600137 KRTAP10-8P60410 259 aa8.25□□□□□ -1.09
VRK3-219ENST00000600137 PRLHP81277 87 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms