RNA–Protein interactions for RNA: ENST00000600097.1

SMG9-210, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-210ENST00000600097 CXCL5P42830 114 aa10.11□□□□□ -0.79
SMG9-210ENST00000600097 COX7B2Q8TF08 81 aa10.1□□□□□ -0.79
SMG9-210ENST00000600097 SPINK8P0C7L1 97 aa10.09□□□□□ -0.79
SMG9-210ENST00000600097 FABP4P15090 132 aa10.08□□□□□ -0.8
SMG9-210ENST00000600097 ZNF22P17026 224 aaPredicted RBP10.08□□□□□ -0.8
SMG9-210ENST00000600097 TMEM170BQ5T4T1 132 aa10.08□□□□□ -0.8
SMG9-210ENST00000600097 C11orf86A6NJI1 115 aa10.07□□□□□ -0.8
SMG9-210ENST00000600097 LINC00167Q96N53 147 aa10.07□□□□□ -0.8
SMG9-210ENST00000600097 H0Y8G0 127 aa10.06□□□□□ -0.8
SMG9-210ENST00000600097 LCE2AQ5TA79 106 aaPredicted RBP10.06□□□□□ -0.8
SMG9-210ENST00000600097 RPL37AP8A6NKH3 93 aa10.05□□□□□ -0.8
SMG9-210ENST00000600097 MAP1LC3CQ9BXW4 147 aa10.05□□□□□ -0.8
SMG9-210ENST00000600097 IGLV5-39A0A0G2JS06 123 aa10.04□□□□□ -0.8
SMG9-210ENST00000600097 UBE2AP49459 152 aa10.03□□□□□ -0.8
SMG9-210ENST00000600097 FAM229BQ4G0N7 80 aa10.03□□□□□ -0.8
SMG9-210ENST00000600097 ANAPC11Q9NYG5 84 aa10.03□□□□□ -0.8
SMG9-210ENST00000600097 IGLV5-37A0A075B6J1 123 aa10.02□□□□□ -0.81
SMG9-210ENST00000600097 PLNP26678 52 aa10.02□□□□□ -0.81
SMG9-210ENST00000600097 KRTAP13-2Q52LG2 175 aa10.02□□□□□ -0.81
SMG9-210ENST00000600097 COA6Q5JTJ3 125 aaKnown RBP10.02□□□□□ -0.81
SMG9-210ENST00000600097 SFTA2Q6UW10 78 aa10.02□□□□□ -0.81
SMG9-210ENST00000600097 TMEM223A0PJW6 202 aa10.01□□□□□ -0.81
SMG9-210ENST00000600097 GAGE10A6NGK3 116 aa10.01□□□□□ -0.81
SMG9-210ENST00000600097 KRTAP13-1Q8IUC0 172 aa10.01□□□□□ -0.81
SMG9-210ENST00000600097 LINC00304Q8N9R0 145 aa10.01□□□□□ -0.81
SMG9-210ENST00000600097 NKAPP1Q8N9T2 125 aa10.01□□□□□ -0.81
SMG9-210ENST00000600097 RETNLBQ9BQ08 111 aa10□□□□□ -0.81
SMG9-210ENST00000600097 CDIP1Q9H305 208 aa10□□□□□ -0.81
SMG9-210ENST00000600097 CTAG1AP78358 180 aa9.99□□□□□ -0.81
SMG9-210ENST00000600097 TPRXLQ17RH7 258 aa9.99□□□□□ -0.81
SMG9-210ENST00000600097 DPM2O94777 84 aa9.98□□□□□ -0.81
SMG9-210ENST00000600097 IGKV2D-26A0A0A0MRZ7 120 aa9.97□□□□□ -0.81
SMG9-210ENST00000600097 IGKCP01834 107 aa9.97□□□□□ -0.81
SMG9-210ENST00000600097 FAT4Q6V0I7 4981 aa9.96□□□□□ -0.81
SMG9-210ENST00000600097 IGLV7-46A0A075B6I9 117 aa9.96□□□□□ -0.82
SMG9-210ENST00000600097 SYS1-DBNDD2H3BUS1 97 aa9.96□□□□□ -0.82
SMG9-210ENST00000600097 COX17Q14061 63 aa9.96□□□□□ -0.82
SMG9-210ENST00000600097 HERVK_113P61574 105 aa9.95□□□□□ -0.82
SMG9-210ENST00000600097 IGKV2-28A0A075B6P5 120 aa9.94□□□□□ -0.82
SMG9-210ENST00000600097 IGKV2D-28P01615 120 aa9.94□□□□□ -0.82
SMG9-210ENST00000600097 PET117Q6UWS5 81 aa9.94□□□□□ -0.82
SMG9-210ENST00000600097 PMCHL2Q9BQD1 86 aa9.94□□□□□ -0.82
SMG9-210ENST00000600097 PFN2P35080 140 aa9.93□□□□□ -0.82
SMG9-210ENST00000600097 ERG28Q9UKR5 140 aa9.93□□□□□ -0.82
SMG9-210ENST00000600097 S100A6P06703 90 aa9.92□□□□□ -0.82
SMG9-210ENST00000600097 PLEKHB2Q96CS7 222 aa9.92□□□□□ -0.82
SMG9-210ENST00000600097 ZNF625Q96I27 306 aaPredicted RBP9.92□□□□□ -0.82
SMG9-210ENST00000600097 KRTAP9-6A0A140TA67 174 aa9.91□□□□□ -0.82
SMG9-210ENST00000600097 LEPROTO15243 131 aa9.91□□□□□ -0.82
SMG9-210ENST00000600097 C3orf79P0CE67 100 aa9.91□□□□□ -0.82
SMG9-210ENST00000600097 HERV-K104P63124 156 aa9.91□□□□□ -0.82
SMG9-210ENST00000600097 PRLHP81277 87 aa9.91□□□□□ -0.82
SMG9-210ENST00000600097 LINC01545Q5VT33 79 aa9.91□□□□□ -0.82
SMG9-210ENST00000600097 FAM19A1Q7Z5A9 133 aa9.91□□□□□ -0.82
SMG9-210ENST00000600097 MYMXA0A1B0GTQ4 84 aa9.9□□□□□ -0.82
SMG9-210ENST00000600097 LINC00587B1AMM8 73 aa9.9□□□□□ -0.82
SMG9-210ENST00000600097 KRTDAPP60985 99 aa9.9□□□□□ -0.82
SMG9-210ENST00000600097 TMEM126AQ9H061 195 aa9.9□□□□□ -0.82
SMG9-210ENST00000600097 S100A2P29034 98 aa9.89□□□□□ -0.83
SMG9-210ENST00000600097 NDUFA12Q9UI09 145 aa9.89□□□□□ -0.83
SMG9-210ENST00000600097 C20orf202A1L168 122 aa9.88□□□□□ -0.83
SMG9-210ENST00000600097 J3QQQ9 107 aa9.88□□□□□ -0.83
SMG9-210ENST00000600097 VPREB1P12018 145 aa9.88□□□□□ -0.83
SMG9-210ENST00000600097 AKR1D1P51857 326 aa9.88□□□□□ -0.83
SMG9-210ENST00000600097 LINC00158P58513 81 aa9.88□□□□□ -0.83
SMG9-210ENST00000600097 RPL24P83731 157 aaKnown RBP9.88□□□□□ -0.83
SMG9-210ENST00000600097 PPDPFQ9H3Y8 114 aa9.88□□□□□ -0.83
SMG9-210ENST00000600097 LGALS3P17931 250 aaKnown RBP9.87□□□□□ -0.83
SMG9-210ENST00000600097 NMUP48645 174 aa9.87□□□□□ -0.83
SMG9-210ENST00000600097 MEIG1Q5JSS6 88 aa9.87□□□□□ -0.83
SMG9-210ENST00000600097 TMEM238C9JI98 176 aa9.86□□□□□ -0.83
SMG9-210ENST00000600097 SPAG11AQ6PDA7 123 aa9.86□□□□□ -0.83
SMG9-210ENST00000600097 SND1-IT1Q9HBX3 110 aa9.86□□□□□ -0.83
SMG9-210ENST00000600097 E9PLD3 99 aa9.85□□□□□ -0.83
SMG9-210ENST00000600097 M0R378 163 aa9.85□□□□□ -0.83
SMG9-210ENST00000600097 HIST3H2BBQ8N257 126 aa9.85□□□□□ -0.83
SMG9-210ENST00000600097 C3orf22Q8N5N4 141 aa9.84□□□□□ -0.83
SMG9-210ENST00000600097 SMIM13P0DJ93 91 aa9.83□□□□□ -0.84
SMG9-210ENST00000600097 TSPEAR-AS2P59090 65 aa9.83□□□□□ -0.84
SMG9-210ENST00000600097 FP248Q71RG6 208 aaPredicted RBP9.83□□□□□ -0.84
SMG9-210ENST00000600097 A0A0U1RRA0 63 aa9.82□□□□□ -0.84
SMG9-210ENST00000600097 HIST1H2BLQ99880 126 aa9.82□□□□□ -0.84
SMG9-210ENST00000600097 HIGD2AQ9BW72 106 aa9.82□□□□□ -0.84
SMG9-210ENST00000600097 SNRPEP62304 92 aaKnown RBP9.81□□□□□ -0.84
SMG9-210ENST00000600097 C4orf48Q5BLP8 95 aa9.8□□□□□ -0.84
SMG9-210ENST00000600097 MUC17Q685J3 4493 aa9.79□□□□□ -0.84
SMG9-210ENST00000600097 MIR7-3HGQ8N6C7 128 aa9.79□□□□□ -0.84
SMG9-210ENST00000600097 LINC00337Q8N6G1 96 aa9.79□□□□□ -0.84
SMG9-210ENST00000600097 C5orf52A6NGY3 159 aa9.78□□□□□ -0.84
SMG9-210ENST00000600097 SPRR4Q96PI1 79 aa9.78□□□□□ -0.84
SMG9-210ENST00000600097 ZNF706Q9Y5V0 76 aaPredicted RBP9.78□□□□□ -0.84
SMG9-210ENST00000600097 Q8NDZ9 215 aa9.77□□□□□ -0.85
SMG9-210ENST00000600097 A0A0J9YXY3 114 aa9.75□□□□□ -0.85
SMG9-210ENST00000600097 MIEN1Q9BRT3 115 aa9.75□□□□□ -0.85
SMG9-210ENST00000600097 ZNF815PA8K554 130 aa9.74□□□□□ -0.85
SMG9-210ENST00000600097 KRTAP13-3Q3SY46 172 aa9.74□□□□□ -0.85
SMG9-210ENST00000600097 ASB16-AS1Q495Z4 193 aa9.74□□□□□ -0.85
SMG9-210ENST00000600097 BOD1L2Q8IYS8 172 aa9.74□□□□□ -0.85
SMG9-210ENST00000600097 ATOH7Q8N100 152 aa9.74□□□□□ -0.85
SMG9-210ENST00000600097 LOC107984156A0A0G2JMH3 177 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms