RNA–Protein interactions for RNA: ENST00000600006.5

CHMP2A-205, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-205ENST00000600006 SCGB1D1O95968 90 aa4.93□□□□□ -1.62
CHMP2A-205ENST00000600006 MT1HL1P0DM35 61 aa4.93□□□□□ -1.62
CHMP2A-205ENST00000600006 TSPEAR-AS2P59090 65 aa4.93□□□□□ -1.62
CHMP2A-205ENST00000600006 GAGE2EQ4V326 116 aa4.93□□□□□ -1.62
CHMP2A-205ENST00000600006 PHF5AQ7RTV0 110 aaKnown RBP4.93□□□□□ -1.62
CHMP2A-205ENST00000600006 KRTAP7-1Q8IUC3 87 aa4.93□□□□□ -1.62
CHMP2A-205ENST00000600006 ATOH7Q8N100 152 aa4.93□□□□□ -1.62
CHMP2A-205ENST00000600006 GAGE2DQ9UEU5 116 aa4.93□□□□□ -1.62
CHMP2A-205ENST00000600006 SRSF9Q13242 221 aaKnown RBP eCLIP4.92□□□□□ -1.62
CHMP2A-205ENST00000600006 JOSD1Q15040 202 aaPredicted RBP4.92□□□□□ -1.62
CHMP2A-205ENST00000600006 MEIG1Q5JSS6 88 aa4.92□□□□□ -1.62
CHMP2A-205ENST00000600006 C9orf129Q5T035 196 aaKnown RBP4.92□□□□□ -1.62
CHMP2A-205ENST00000600006 SPINK6Q6UWN8 80 aa4.92□□□□□ -1.62
CHMP2A-205ENST00000600006 FAM19A5Q7Z5A7 132 aaPredicted RBP4.92□□□□□ -1.62
CHMP2A-205ENST00000600006 PSORS1C2Q9UIG4 136 aa4.92□□□□□ -1.62
CHMP2A-205ENST00000600006 ZNF815PA8K554 130 aa4.91□□□□□ -1.62
CHMP2A-205ENST00000600006 M0QXV9 152 aa4.91□□□□□ -1.62
CHMP2A-205ENST00000600006 C21orf62-AS1Q17RA5 79 aa4.91□□□□□ -1.62
CHMP2A-205ENST00000600006 IGKV2D-26A0A0A0MRZ7 120 aa4.9□□□□□ -1.63
CHMP2A-205ENST00000600006 TIMM17BO60830 172 aa4.9□□□□□ -1.63
CHMP2A-205ENST00000600006 PFN2P35080 140 aa4.9□□□□□ -1.63
CHMP2A-205ENST00000600006 LINC00158P58513 81 aa4.9□□□□□ -1.63
CHMP2A-205ENST00000600006 ANKRD39Q53RE8 183 aa4.9□□□□□ -1.63
CHMP2A-205ENST00000600006 KRTAP11-1Q8IUC1 163 aa4.9□□□□□ -1.63
CHMP2A-205ENST00000600006 HMCN2Q8NDA2 5059 aa4.9□□□□□ -1.63
CHMP2A-205ENST00000600006 C1orf137Q5JT78 98 aa4.89□□□□□ -1.63
CHMP2A-205ENST00000600006 SERTAD4-AS1Q5TG53 156 aa4.89□□□□□ -1.63
CHMP2A-205ENST00000600006 LINC01600Q96MT4 127 aa4.89□□□□□ -1.63
CHMP2A-205ENST00000600006 XAGE1AQ9HD64 81 aa4.89□□□□□ -1.63
CHMP2A-205ENST00000600006 PLA2G2DQ9UNK4 145 aa4.89□□□□□ -1.63
CHMP2A-205ENST00000600006 TNXBP22105 4242 aa4.89□□□□□ -1.63
CHMP2A-205ENST00000600006 A0A0J9YXY3 114 aa4.88□□□□□ -1.63
CHMP2A-205ENST00000600006 IGLV7-43P04211 117 aa4.88□□□□□ -1.63
CHMP2A-205ENST00000600006 SMIM13P0DJ93 91 aa4.88□□□□□ -1.63
CHMP2A-205ENST00000600006 PYY3Q5JQD4 70 aa4.88□□□□□ -1.63
CHMP2A-205ENST00000600006 REG3GQ6UW15 175 aa4.88□□□□□ -1.63
CHMP2A-205ENST00000600006 SCGB1D4Q6XE38 83 aa4.88□□□□□ -1.63
CHMP2A-205ENST00000600006 MIR7-3HGQ8N6C7 128 aa4.88□□□□□ -1.63
CHMP2A-205ENST00000600006 VAMP8Q9BV40 100 aa4.88□□□□□ -1.63
CHMP2A-205ENST00000600006 SND1-IT1Q9HBX3 110 aa4.88□□□□□ -1.63
CHMP2A-205ENST00000600006 TP73-AS1Q9UF72 201 aa4.88□□□□□ -1.63
CHMP2A-205ENST00000600006 IGLV5-37A0A075B6J1 123 aa4.87□□□□□ -1.63
CHMP2A-205ENST00000600006 LOC107984156A0A0G2JMH3 177 aa4.87□□□□□ -1.63
CHMP2A-205ENST00000600006 TMEM238C9JI98 176 aa4.87□□□□□ -1.63
CHMP2A-205ENST00000600006 UBE2BP63146 152 aa4.87□□□□□ -1.63
CHMP2A-205ENST00000600006 RPL24P83731 157 aaKnown RBP4.87□□□□□ -1.63
CHMP2A-205ENST00000600006 Q6ZVH6 145 aa4.87□□□□□ -1.63
CHMP2A-205ENST00000600006 ARL17AQ8IVW1 177 aa4.87□□□□□ -1.63
CHMP2A-205ENST00000600006 COPS9Q8WXC6 57 aa4.87□□□□□ -1.63
CHMP2A-205ENST00000600006 MIEN1Q9BRT3 115 aa4.87□□□□□ -1.63
CHMP2A-205ENST00000600006 DLEU1O43261 78 aa4.86□□□□□ -1.63
CHMP2A-205ENST00000600006 COX8AP10176 69 aa4.86□□□□□ -1.63
CHMP2A-205ENST00000600006 SPATA45Q537H7 98 aa4.86□□□□□ -1.63
CHMP2A-205ENST00000600006 PCP2Q8IVA1 136 aa4.86□□□□□ -1.63
CHMP2A-205ENST00000600006 NKAPP1Q8N9T2 125 aa4.86□□□□□ -1.63
CHMP2A-205ENST00000600006 TTTY13Q9BZ97 58 aa4.86□□□□□ -1.63
CHMP2A-205ENST00000600006 PPDPFQ9H3Y8 114 aa4.86□□□□□ -1.63
CHMP2A-205ENST00000600006 PAM16Q9Y3D7 125 aa4.86□□□□□ -1.63
CHMP2A-205ENST00000600006 C22orf24Q9Y442 160 aa4.86□□□□□ -1.63
CHMP2A-205ENST00000600006 A0A0U1RRA0 63 aa4.85□□□□□ -1.63
CHMP2A-205ENST00000600006 H0Y9J4 135 aa4.85□□□□□ -1.63
CHMP2A-205ENST00000600006 KRTAP10-8P60410 259 aa4.85□□□□□ -1.63
CHMP2A-205ENST00000600006 S100A12P80511 92 aa4.85□□□□□ -1.63
CHMP2A-205ENST00000600006 LBHQ53QV2 105 aaPredicted RBP4.85□□□□□ -1.63
CHMP2A-205ENST00000600006 BOD1L2Q8IYS8 172 aa4.85□□□□□ -1.63
CHMP2A-205ENST00000600006 DIRC1Q969H9 104 aa4.85□□□□□ -1.63
CHMP2A-205ENST00000600006 LITAFQ99732 161 aa4.85□□□□□ -1.63
CHMP2A-205ENST00000600006 SPANXDQ9BXN6 97 aa4.85□□□□□ -1.63
CHMP2A-205ENST00000600006 SPANXCQ9NY87 97 aa4.85□□□□□ -1.63
CHMP2A-205ENST00000600006 TMEM238LA0A1B0GVL6 79 aa4.84□□□□□ -1.63
CHMP2A-205ENST00000600006 NDUFC2O95298 119 aa4.84□□□□□ -1.63
CHMP2A-205ENST00000600006 SMIM6P0DI80 62 aa4.84□□□□□ -1.63
CHMP2A-205ENST00000600006 VPREB1P12018 145 aa4.84□□□□□ -1.63
CHMP2A-205ENST00000600006 IFITM1P13164 125 aa4.84□□□□□ -1.63
CHMP2A-205ENST00000600006 MRPL55Q7Z7F7 128 aaKnown RBP4.84□□□□□ -1.63
CHMP2A-205ENST00000600006 SPANXB1Q9NS25 103 aaPredicted RBP4.84□□□□□ -1.63
CHMP2A-205ENST00000600006 ADAMTSL4-AS1Q5T5F5 129 aa4.83□□□□□ -1.64
CHMP2A-205ENST00000600006 SLC25A34Q6PIV7 304 aa4.83□□□□□ -1.64
CHMP2A-205ENST00000600006 DAND5Q8N907 189 aa4.83□□□□□ -1.64
CHMP2A-205ENST00000600006 LINC00308Q8TCZ7 52 aa4.83□□□□□ -1.64
CHMP2A-205ENST00000600006 TRBV10-2A0A0K0K1G8 114 aa4.82□□□□□ -1.64
CHMP2A-205ENST00000600006 M0R378 163 aa4.82□□□□□ -1.64
CHMP2A-205ENST00000600006 LINC00167Q96N53 147 aa4.82□□□□□ -1.64
CHMP2A-205ENST00000600006 HIGD1BQ9P298 99 aa4.82□□□□□ -1.64
CHMP2A-205ENST00000600006 CBY1Q9Y3M2 126 aa4.82□□□□□ -1.64
CHMP2A-205ENST00000600006 LOC105371267A0A1B0GV96 52 aa4.81□□□□□ -1.64
CHMP2A-205ENST00000600006 ZNF861PO60384 105 aa4.81□□□□□ -1.64
CHMP2A-205ENST00000600006 KRTAP1-4P0C5Y4 121 aa4.81□□□□□ -1.64
CHMP2A-205ENST00000600006 C14orf144Q96I85 54 aa4.81□□□□□ -1.64
CHMP2A-205ENST00000600006 GAGE10A6NGK3 116 aa4.8□□□□□ -1.64
CHMP2A-205ENST00000600006 BCE1O60756 84 aa4.8□□□□□ -1.64
CHMP2A-205ENST00000600006 SOSTDC1Q6X4U4 206 aa4.8□□□□□ -1.64
CHMP2A-205ENST00000600006 LINC00518Q8N0U6 118 aa4.8□□□□□ -1.64
CHMP2A-205ENST00000600006 Q8NDZ9 215 aa4.8□□□□□ -1.64
CHMP2A-205ENST00000600006 IGLV1-50A0A075B6I6 118 aa4.79□□□□□ -1.64
CHMP2A-205ENST00000600006 RPL37AP8A6NKH3 93 aa4.79□□□□□ -1.64
CHMP2A-205ENST00000600006 NCR3O14931 201 aa4.79□□□□□ -1.64
CHMP2A-205ENST00000600006 RPL28P46779 137 aaKnown RBP4.79□□□□□ -1.64
CHMP2A-205ENST00000600006 NPC2P61916 151 aa4.79□□□□□ -1.64
CHMP2A-205ENST00000600006 TAL2Q16559 108 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms