RNA–Protein interactions for RNA: ENST00000599144.5

IRF3-222, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-222ENST00000599144 M0R378 163 aa10.97□□□□□ -0.65
IRF3-222ENST00000599144 LINC00614P0C842 121 aa10.97□□□□□ -0.65
IRF3-222ENST00000599144 LINC01549A6NIU2 74 aa10.96□□□□□ -0.65
IRF3-222ENST00000599144 ATP5LO75964 103 aa10.96□□□□□ -0.65
IRF3-222ENST00000599144 BAGE3Q86Y29 109 aa10.96□□□□□ -0.65
IRF3-222ENST00000599144 PLEKHB2Q96CS7 222 aa10.96□□□□□ -0.65
IRF3-222ENST00000599144 SND1-IT1Q9HBX3 110 aa10.96□□□□□ -0.65
IRF3-222ENST00000599144 CHCHD1Q96BP2 118 aaKnown RBP10.94□□□□□ -0.66
IRF3-222ENST00000599144 ZNF625Q96I27 306 aaPredicted RBP10.94□□□□□ -0.66
IRF3-222ENST00000599144 HIGD2AQ9BW72 106 aa10.94□□□□□ -0.66
IRF3-222ENST00000599144 PMVKQ15126 192 aa10.92□□□□□ -0.66
IRF3-222ENST00000599144 KRTAP4-1Q9BYQ7 146 aa10.92□□□□□ -0.66
IRF3-222ENST00000599144 DAND5Q8N907 189 aa10.91□□□□□ -0.66
IRF3-222ENST00000599144 URB1-AS1Q96HZ7 61 aa10.91□□□□□ -0.66
IRF3-222ENST00000599144 ERG28Q9UKR5 140 aa10.91□□□□□ -0.66
IRF3-222ENST00000599144 H3BRM9 83 aa10.9□□□□□ -0.66
IRF3-222ENST00000599144 HIST1H2BKO60814 126 aa10.9□□□□□ -0.66
IRF3-222ENST00000599144 HIST1H2BJP06899 126 aa10.9□□□□□ -0.66
IRF3-222ENST00000599144 HIST1H2BOP23527 126 aa10.9□□□□□ -0.66
IRF3-222ENST00000599144 HIST1H2BBP33778 126 aa10.9□□□□□ -0.66
IRF3-222ENST00000599144 HIST1H2BDP58876 126 aa10.9□□□□□ -0.66
IRF3-222ENST00000599144 HIST1H2BCP62807 126 aa10.9□□□□□ -0.66
IRF3-222ENST00000599144 HIST2H2BEQ16778 126 aa10.9□□□□□ -0.66
IRF3-222ENST00000599144 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.9□□□□□ -0.66
IRF3-222ENST00000599144 HIST1H2BHQ93079 126 aa10.9□□□□□ -0.66
IRF3-222ENST00000599144 HIST1H2BNQ99877 126 aa10.9□□□□□ -0.66
IRF3-222ENST00000599144 HIST1H2BMQ99879 126 aa10.9□□□□□ -0.66
IRF3-222ENST00000599144 HSBP1O75506 76 aa10.89□□□□□ -0.67
IRF3-222ENST00000599144 HBDP02042 147 aa10.89□□□□□ -0.67
IRF3-222ENST00000599144 IGLV5-39A0A0G2JS06 123 aa10.88□□□□□ -0.67
IRF3-222ENST00000599144 NDUFA6P56556 154 aa10.88□□□□□ -0.67
IRF3-222ENST00000599144 SPRR4Q96PI1 79 aa10.88□□□□□ -0.67
IRF3-222ENST00000599144 SERF1AO75920 110 aa10.87□□□□□ -0.67
IRF3-222ENST00000599144 IGLC3P0DOY3 106 aa10.87□□□□□ -0.67
IRF3-222ENST00000599144 ZNF22P17026 224 aaPredicted RBP10.87□□□□□ -0.67
IRF3-222ENST00000599144 KRTAP13-3Q3SY46 172 aa10.87□□□□□ -0.67
IRF3-222ENST00000599144 RPL24P83731 157 aaKnown RBP10.86□□□□□ -0.67
IRF3-222ENST00000599144 PMCHL1Q16048 86 aa10.86□□□□□ -0.67
IRF3-222ENST00000599144 LINC00337Q8N6G1 96 aa10.86□□□□□ -0.67
IRF3-222ENST00000599144 Q8NBF4 154 aa10.85□□□□□ -0.67
IRF3-222ENST00000599144 A0A096LNJ9 63 aa10.84□□□□□ -0.67
IRF3-222ENST00000599144 A0A0U1RRA0 63 aa10.84□□□□□ -0.67
IRF3-222ENST00000599144 SPAG11AQ6PDA7 123 aa10.84□□□□□ -0.67
IRF3-222ENST00000599144 CTAG1AP78358 180 aa10.83□□□□□ -0.68
IRF3-222ENST00000599144 ASB16-AS1Q495Z4 193 aa10.83□□□□□ -0.68
IRF3-222ENST00000599144 FP248Q71RG6 208 aaPredicted RBP10.83□□□□□ -0.68
IRF3-222ENST00000599144 LINC01547P58512 204 aaPredicted RBP10.82□□□□□ -0.68
IRF3-222ENST00000599144 LINC00310P59036 64 aa10.82□□□□□ -0.68
IRF3-222ENST00000599144 C4orf48Q5BLP8 95 aa10.82□□□□□ -0.68
IRF3-222ENST00000599144 FAM19A2Q8N3H0 131 aa10.82□□□□□ -0.68
IRF3-222ENST00000599144 COA6Q5JTJ3 125 aaKnown RBP10.81□□□□□ -0.68
IRF3-222ENST00000599144 C11orf86A6NJI1 115 aa10.79□□□□□ -0.68
IRF3-222ENST00000599144 LINC00158P58513 81 aa10.79□□□□□ -0.68
IRF3-222ENST00000599144 COX17Q14061 63 aa10.79□□□□□ -0.68
IRF3-222ENST00000599144 HSPB8Q9UJY1 196 aa10.79□□□□□ -0.68
IRF3-222ENST00000599144 LEPROTL1O95214 131 aa10.78□□□□□ -0.68
IRF3-222ENST00000599144 TMEM170BQ5T4T1 132 aa10.77□□□□□ -0.69
IRF3-222ENST00000599144 LCE2DQ5TA82 110 aaPredicted RBP10.77□□□□□ -0.69
IRF3-222ENST00000599144 SMCR5Q8TEV8 140 aa10.77□□□□□ -0.69
IRF3-222ENST00000599144 IFI27L1Q96BM0 104 aa10.77□□□□□ -0.69
IRF3-222ENST00000599144 FSIP2Q5CZC0 6907 aa10.77□□□□□ -0.69
IRF3-222ENST00000599144 NCR3O14931 201 aa10.76□□□□□ -0.69
IRF3-222ENST00000599144 S100A6P06703 90 aa10.75□□□□□ -0.69
IRF3-222ENST00000599144 FABP4P15090 132 aa10.75□□□□□ -0.69
IRF3-222ENST00000599144 ZNF706Q9Y5V0 76 aaPredicted RBP10.75□□□□□ -0.69
IRF3-222ENST00000599144 CRCT1Q9UGL9 99 aa10.73□□□□□ -0.69
IRF3-222ENST00000599144 TRAV12-1A0A0B4J245 112 aa10.72□□□□□ -0.69
IRF3-222ENST00000599144 SMIM13P0DJ93 91 aa10.72□□□□□ -0.69
IRF3-222ENST00000599144 SEC61BP60468 96 aaKnown RBP10.72□□□□□ -0.69
IRF3-222ENST00000599144 PRYO14603 147 aa10.71□□□□□ -0.69
IRF3-222ENST00000599144 GAGE2AQ6NT46 116 aa10.71□□□□□ -0.69
IRF3-222ENST00000599144 BOD1L2Q8IYS8 172 aa10.71□□□□□ -0.69
IRF3-222ENST00000599144 MAP1LC3CQ9BXW4 147 aa10.71□□□□□ -0.69
IRF3-222ENST00000599144 IGLV9-49A0A0B4J1Y8 123 aa10.7□□□□□ -0.7
IRF3-222ENST00000599144 SPINK1P00995 79 aa10.7□□□□□ -0.7
IRF3-222ENST00000599144 MOBPQ13875 183 aa10.7□□□□□ -0.7
IRF3-222ENST00000599144 CHTOPQ9Y3Y2 248 aaKnown RBP10.7□□□□□ -0.7
IRF3-222ENST00000599144 ERC2-IT1O76042 136 aa10.69□□□□□ -0.7
IRF3-222ENST00000599144 S100A2P29034 98 aa10.69□□□□□ -0.7
IRF3-222ENST00000599144 SPRR1AP35321 89 aa10.69□□□□□ -0.7
IRF3-222ENST00000599144 ETDCA0A1B0GVM5 59 aa10.68□□□□□ -0.7
IRF3-222ENST00000599144 KRTAP4-16G5E9R7 235 aaPredicted RBP10.68□□□□□ -0.7
IRF3-222ENST00000599144 H0Y8G0 127 aa10.68□□□□□ -0.7
IRF3-222ENST00000599144 TRBV10-3A0A0K0K1G6 114 aa10.67□□□□□ -0.7
IRF3-222ENST00000599144 LINC00483Q53H64 154 aa10.67□□□□□ -0.7
IRF3-222ENST00000599144 LCE2CQ5TA81 110 aa10.67□□□□□ -0.7
IRF3-222ENST00000599144 Q8N377 158 aa10.67□□□□□ -0.7
IRF3-222ENST00000599144 KCNQ1DNQ9H478 68 aa10.67□□□□□ -0.7
IRF3-222ENST00000599144 TMEM223A0PJW6 202 aa10.66□□□□□ -0.7
IRF3-222ENST00000599144 MEIG1Q5JSS6 88 aa10.66□□□□□ -0.7
IRF3-222ENST00000599144 HIST3H2BBQ8N257 126 aa10.66□□□□□ -0.7
IRF3-222ENST00000599144 MIR7-3HGQ8N6C7 128 aa10.66□□□□□ -0.7
IRF3-222ENST00000599144 SNRPEP62304 92 aaKnown RBP10.65□□□□□ -0.7
IRF3-222ENST00000599144 SFTA2Q6UW10 78 aa10.65□□□□□ -0.7
IRF3-222ENST00000599144 SYS1-DBNDD2H3BUS1 97 aa10.64□□□□□ -0.71
IRF3-222ENST00000599144 PLNP26678 52 aa10.63□□□□□ -0.71
IRF3-222ENST00000599144 XP32Q5T750 250 aa10.63□□□□□ -0.71
IRF3-222ENST00000599144 PET117Q6UWS5 81 aa10.63□□□□□ -0.71
IRF3-222ENST00000599144 C5orf52A6NGY3 159 aa10.62□□□□□ -0.71
IRF3-222ENST00000599144 B5MCH6 92 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 171.1 ms