RNA–Protein interactions for RNA: ENST00000596445.5

VRK3-211, Transcript of vaccinia related kinase 3, humanhuman

TSL 5

Gene VRK3, Length 840 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-211ENST00000596445 A0A0J9YXY3 114 aa5.22□□□□□ -1.57
VRK3-211ENST00000596445 M0QXV9 152 aa5.22□□□□□ -1.57
VRK3-211ENST00000596445 JOSD1Q15040 202 aaPredicted RBP5.22□□□□□ -1.57
VRK3-211ENST00000596445 PHF5AQ7RTV0 110 aaKnown RBP5.22□□□□□ -1.57
VRK3-211ENST00000596445 MIR7-3HGQ8N6C7 128 aa5.22□□□□□ -1.57
VRK3-211ENST00000596445 KRTAP4-5Q9BYR2 181 aa5.22□□□□□ -1.57
VRK3-211ENST00000596445 TTTY13Q9BZ97 58 aa5.22□□□□□ -1.57
VRK3-211ENST00000596445 TP73-AS1Q9UF72 201 aa5.22□□□□□ -1.57
VRK3-211ENST00000596445 IGLV5-37A0A075B6J1 123 aa5.21□□□□□ -1.58
VRK3-211ENST00000596445 RPL37AP61513 92 aaKnown RBP5.21□□□□□ -1.58
VRK3-211ENST00000596445 C22orf24Q9Y442 160 aa5.21□□□□□ -1.58
VRK3-211ENST00000596445 LOC107984156A0A0G2JMH3 177 aa5.2□□□□□ -1.58
VRK3-211ENST00000596445 TIMM17BO60830 172 aa5.2□□□□□ -1.58
VRK3-211ENST00000596445 VPREB1P12018 145 aa5.2□□□□□ -1.58
VRK3-211ENST00000596445 KRTAP10-4P60372 401 aaPredicted RBP5.2□□□□□ -1.58
VRK3-211ENST00000596445 RPL24P83731 157 aaKnown RBP5.2□□□□□ -1.58
VRK3-211ENST00000596445 LBHQ53QV2 105 aaPredicted RBP5.2□□□□□ -1.58
VRK3-211ENST00000596445 ADAMTSL4-AS1Q5T5F5 129 aa5.2□□□□□ -1.58
VRK3-211ENST00000596445 MRPL55Q7Z7F7 128 aaKnown RBP5.2□□□□□ -1.58
VRK3-211ENST00000596445 PCP2Q8IVA1 136 aa5.2□□□□□ -1.58
VRK3-211ENST00000596445 ARL17AQ8IVW1 177 aa5.2□□□□□ -1.58
VRK3-211ENST00000596445 DAND5Q8N907 189 aa5.2□□□□□ -1.58
VRK3-211ENST00000596445 NKAPP1Q8N9T2 125 aa5.2□□□□□ -1.58
VRK3-211ENST00000596445 PRR3P79522 188 aaKnown RBP5.19□□□□□ -1.58
VRK3-211ENST00000596445 SCGB1D4Q6XE38 83 aa5.19□□□□□ -1.58
VRK3-211ENST00000596445 BOD1L2Q8IYS8 172 aa5.19□□□□□ -1.58
VRK3-211ENST00000596445 Q8NDZ9 215 aa5.19□□□□□ -1.58
VRK3-211ENST00000596445 LITAFQ99732 161 aa5.19□□□□□ -1.58
VRK3-211ENST00000596445 UBE2BP63146 152 aa5.18□□□□□ -1.58
VRK3-211ENST00000596445 LINC00167Q96N53 147 aa5.18□□□□□ -1.58
VRK3-211ENST00000596445 MIEN1Q9BRT3 115 aa5.18□□□□□ -1.58
VRK3-211ENST00000596445 PSORS1C2Q9UIG4 136 aa5.18□□□□□ -1.58
VRK3-211ENST00000596445 TMEM238C9JI98 176 aa5.17□□□□□ -1.58
VRK3-211ENST00000596445 PYY3Q5JQD4 70 aa5.17□□□□□ -1.58
VRK3-211ENST00000596445 KRTAP11-1Q8IUC1 163 aa5.17□□□□□ -1.58
VRK3-211ENST00000596445 VAMP8Q9BV40 100 aa5.17□□□□□ -1.58
VRK3-211ENST00000596445 GAGE10A6NGK3 116 aa5.16□□□□□ -1.58
VRK3-211ENST00000596445 RPL37AP8A6NKH3 93 aa5.16□□□□□ -1.58
VRK3-211ENST00000596445 M0R378 163 aa5.16□□□□□ -1.58
VRK3-211ENST00000596445 COX8AP10176 69 aa5.16□□□□□ -1.58
VRK3-211ENST00000596445 NPC2P61916 151 aa5.16□□□□□ -1.58
VRK3-211ENST00000596445 SPATA45Q537H7 98 aa5.16□□□□□ -1.58
VRK3-211ENST00000596445 SOSTDC1Q6X4U4 206 aa5.16□□□□□ -1.58
VRK3-211ENST00000596445 Q6ZVH6 145 aa5.16□□□□□ -1.58
VRK3-211ENST00000596445 LINC00308Q8TCZ7 52 aa5.16□□□□□ -1.58
VRK3-211ENST00000596445 SPANXDQ9BXN6 97 aa5.16□□□□□ -1.58
VRK3-211ENST00000596445 SPANXCQ9NY87 97 aa5.16□□□□□ -1.58
VRK3-211ENST00000596445 PAM16Q9Y3D7 125 aa5.16□□□□□ -1.58
VRK3-211ENST00000596445 ABCA13Q86UQ4 5058 aa5.16□□□□□ -1.58
VRK3-211ENST00000596445 PKHD1L1Q86WI1 4243 aa5.16□□□□□ -1.58
VRK3-211ENST00000596445 IGLV1-50A0A075B6I6 118 aa5.15□□□□□ -1.59
VRK3-211ENST00000596445 EIF4EBP3O60516 100 aaPredicted RBP5.15□□□□□ -1.59
VRK3-211ENST00000596445 NDUFC2O95298 119 aa5.15□□□□□ -1.59
VRK3-211ENST00000596445 INAFM2P0DMQ5 153 aa5.15□□□□□ -1.59
VRK3-211ENST00000596445 C1orf137Q5JT78 98 aa5.15□□□□□ -1.59
VRK3-211ENST00000596445 COPS9Q8WXC6 57 aa5.15□□□□□ -1.59
VRK3-211ENST00000596445 IGKV2-28A0A075B6P5 120 aa5.14□□□□□ -1.59
VRK3-211ENST00000596445 TRBV10-2A0A0K0K1G8 114 aa5.14□□□□□ -1.59
VRK3-211ENST00000596445 NCR3O14931 201 aa5.14□□□□□ -1.59
VRK3-211ENST00000596445 DLEU1O43261 78 aa5.14□□□□□ -1.59
VRK3-211ENST00000596445 IGKV2D-28P01615 120 aa5.14□□□□□ -1.59
VRK3-211ENST00000596445 IFITM1P13164 125 aa5.14□□□□□ -1.59
VRK3-211ENST00000596445 HNRNPA3P51991 378 aaKnown RBP5.14□□□□□ -1.59
VRK3-211ENST00000596445 PPDPFQ9H3Y8 114 aa5.14□□□□□ -1.59
VRK3-211ENST00000596445 SPANXB1Q9NS25 103 aaPredicted RBP5.14□□□□□ -1.59
VRK3-211ENST00000596445 MYCBP2O75592 4640 aa5.13□□□□□ -1.59
VRK3-211ENST00000596445 IGLV7-43P04211 117 aa5.13□□□□□ -1.59
VRK3-211ENST00000596445 C14orf144Q96I85 54 aa5.13□□□□□ -1.59
VRK3-211ENST00000596445 FLG2Q5D862 2391 aaPredicted RBP5.13□□□□□ -1.59
VRK3-211ENST00000596445 PCLOQ9Y6V0 5065 aa5.12□□□□□ -1.59
VRK3-211ENST00000596445 BCE1O60756 84 aa5.12□□□□□ -1.59
VRK3-211ENST00000596445 SRSF9Q13242 221 aaKnown RBP eCLIP5.12□□□□□ -1.59
VRK3-211ENST00000596445 SLC25A34Q6PIV7 304 aa5.12□□□□□ -1.59
VRK3-211ENST00000596445 MUSTN1Q8IVN3 82 aa5.12□□□□□ -1.59
VRK3-211ENST00000596445 TRBV10-3A0A0K0K1G6 114 aa5.11□□□□□ -1.59
VRK3-211ENST00000596445 IGLV6-57P01721 117 aa5.11□□□□□ -1.59
VRK3-211ENST00000596445 DDTP30046 118 aa5.11□□□□□ -1.59
VRK3-211ENST00000596445 S100A12P80511 92 aa5.11□□□□□ -1.59
VRK3-211ENST00000596445 REG3GQ6UW15 175 aa5.11□□□□□ -1.59
VRK3-211ENST00000596445 SPINK6Q6UWN8 80 aa5.11□□□□□ -1.59
VRK3-211ENST00000596445 LINC00518Q8N0U6 118 aa5.11□□□□□ -1.59
VRK3-211ENST00000596445 TMEM126AQ9H061 195 aa5.11□□□□□ -1.59
VRK3-211ENST00000596445 KCNQ1DNQ9H478 68 aa5.11□□□□□ -1.59
VRK3-211ENST00000596445 PRYO14603 147 aa5.1□□□□□ -1.59
VRK3-211ENST00000596445 ZNF861PO60384 105 aa5.1□□□□□ -1.59
VRK3-211ENST00000596445 S100A7L2Q5SY68 101 aa5.1□□□□□ -1.59
VRK3-211ENST00000596445 HIST1H4GQ99525 98 aa5.1□□□□□ -1.59
VRK3-211ENST00000596445 HIGD1BQ9P298 99 aa5.1□□□□□ -1.59
VRK3-211ENST00000596445 RPL28P46779 137 aaKnown RBP5.09□□□□□ -1.59
VRK3-211ENST00000596445 DIRC1Q969H9 104 aa5.09□□□□□ -1.59
VRK3-211ENST00000596445 CBY1Q9Y3M2 126 aa5.09□□□□□ -1.59
VRK3-211ENST00000596445 LOC105371267A0A1B0GV96 52 aa5.08□□□□□ -1.6
VRK3-211ENST00000596445 H0Y9J4 135 aa5.08□□□□□ -1.6
VRK3-211ENST00000596445 SMIM6P0DI80 62 aa5.08□□□□□ -1.6
VRK3-211ENST00000596445 SPRR1AP35321 89 aa5.08□□□□□ -1.6
VRK3-211ENST00000596445 UBE2AP49459 152 aa5.08□□□□□ -1.6
VRK3-211ENST00000596445 C2orf91Q6ZV80 131 aa5.08□□□□□ -1.6
VRK3-211ENST00000596445 KRTAP13-1Q8IUC0 172 aa5.08□□□□□ -1.6
VRK3-211ENST00000596445 LINC00337Q8N6G1 96 aa5.08□□□□□ -1.6
VRK3-211ENST00000596445 OR13C6PQ8NH95 151 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms