RNA–Protein interactions for RNA: ENST00000595874.1

SHKBP1-210, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 203 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-210ENST00000595874 NCR3O14931 201 aa6.09□□□□□ -1.43
SHKBP1-210ENST00000595874 SMIM13P0DJ93 91 aa6.09□□□□□ -1.43
SHKBP1-210ENST00000595874 MEIG1Q5JSS6 88 aa6.09□□□□□ -1.43
SHKBP1-210ENST00000595874 SLC7A5P1Q8MH63 180 aa6.09□□□□□ -1.43
SHKBP1-210ENST00000595874 TMEM223A0PJW6 202 aa6.08□□□□□ -1.44
SHKBP1-210ENST00000595874 TRGC2P03986 189 aa6.08□□□□□ -1.44
SHKBP1-210ENST00000595874 RPL13AP40429 203 aaKnown RBP6.08□□□□□ -1.44
SHKBP1-210ENST00000595874 KRTAP13-2Q52LG2 175 aa6.08□□□□□ -1.44
SHKBP1-210ENST00000595874 RETNLBQ9BQ08 111 aa6.08□□□□□ -1.44
SHKBP1-210ENST00000595874 PMCHL2Q9BQD1 86 aa6.08□□□□□ -1.44
SHKBP1-210ENST00000595874 TMEM126AQ9H061 195 aa6.08□□□□□ -1.44
SHKBP1-210ENST00000595874 ATP6V1G1O75348 118 aa6.07□□□□□ -1.44
SHKBP1-210ENST00000595874 HSBP1O75506 76 aa6.07□□□□□ -1.44
SHKBP1-210ENST00000595874 CRYGAP11844 174 aa6.07□□□□□ -1.44
SHKBP1-210ENST00000595874 FABP4P15090 132 aa6.07□□□□□ -1.44
SHKBP1-210ENST00000595874 M0R378 163 aa6.06□□□□□ -1.44
SHKBP1-210ENST00000595874 RPL24P83731 157 aaKnown RBP6.06□□□□□ -1.44
SHKBP1-210ENST00000595874 KRTAP13-1Q8IUC0 172 aa6.06□□□□□ -1.44
SHKBP1-210ENST00000595874 CHCHD1Q96BP2 118 aaKnown RBP6.06□□□□□ -1.44
SHKBP1-210ENST00000595874 HIGD2AQ9BW72 106 aa6.06□□□□□ -1.44
SHKBP1-210ENST00000595874 SERF1AO75920 110 aa6.05□□□□□ -1.44
SHKBP1-210ENST00000595874 TSPEAR-AS2P59090 65 aa6.05□□□□□ -1.44
SHKBP1-210ENST00000595874 C3orf22Q8N5N4 141 aa6.05□□□□□ -1.44
SHKBP1-210ENST00000595874 DAND5Q8N907 189 aa6.05□□□□□ -1.44
SHKBP1-210ENST00000595874 TRAV12-1A0A0B4J245 112 aa6.04□□□□□ -1.44
SHKBP1-210ENST00000595874 LINC00310P59036 64 aa6.04□□□□□ -1.44
SHKBP1-210ENST00000595874 BOD1L2Q8IYS8 172 aa6.04□□□□□ -1.44
SHKBP1-210ENST00000595874 MIR7-3HGQ8N6C7 128 aa6.04□□□□□ -1.44
SHKBP1-210ENST00000595874 NPC2P61916 151 aa6.03□□□□□ -1.44
SHKBP1-210ENST00000595874 COX17Q14061 63 aa6.03□□□□□ -1.44
SHKBP1-210ENST00000595874 PPDPFQ9H3Y8 114 aa6.03□□□□□ -1.44
SHKBP1-210ENST00000595874 IGKV2D-26A0A0A0MRZ7 120 aa6.02□□□□□ -1.45
SHKBP1-210ENST00000595874 LEPROTL1O95214 131 aa6.02□□□□□ -1.45
SHKBP1-210ENST00000595874 NDUFA12Q9UI09 145 aa6.02□□□□□ -1.45
SHKBP1-210ENST00000595874 LINC00304Q8N9R0 145 aa6.01□□□□□ -1.45
SHKBP1-210ENST00000595874 PLEKHB2Q96CS7 222 aa6□□□□□ -1.45
SHKBP1-210ENST00000595874 MYMXA0A1B0GTQ4 84 aa5.99□□□□□ -1.45
SHKBP1-210ENST00000595874 TRBV10-3A0A0K0K1G6 114 aa5.98□□□□□ -1.45
SHKBP1-210ENST00000595874 COLCA2A8K830 154 aa5.98□□□□□ -1.45
SHKBP1-210ENST00000595874 LEPROTO15243 131 aa5.98□□□□□ -1.45
SHKBP1-210ENST00000595874 SFTA2Q6UW10 78 aa5.98□□□□□ -1.45
SHKBP1-210ENST00000595874 SMCR5Q8TEV8 140 aa5.98□□□□□ -1.45
SHKBP1-210ENST00000595874 ETDCA0A1B0GVM5 59 aa5.97□□□□□ -1.45
SHKBP1-210ENST00000595874 DPM2O94777 84 aa5.97□□□□□ -1.45
SHKBP1-210ENST00000595874 IGKCP01834 107 aa5.97□□□□□ -1.45
SHKBP1-210ENST00000595874 LGALS3P17931 250 aaKnown RBP5.97□□□□□ -1.45
SHKBP1-210ENST00000595874 HERV-K104P63124 156 aa5.97□□□□□ -1.45
SHKBP1-210ENST00000595874 FAM229BQ4G0N7 80 aa5.97□□□□□ -1.45
SHKBP1-210ENST00000595874 SPRR4Q96PI1 79 aa5.97□□□□□ -1.45
SHKBP1-210ENST00000595874 J3QQQ9 107 aa5.96□□□□□ -1.46
SHKBP1-210ENST00000595874 PRYO14603 147 aa5.96□□□□□ -1.46
SHKBP1-210ENST00000595874 HSPB8Q9UJY1 196 aa5.96□□□□□ -1.46
SHKBP1-210ENST00000595874 HERVK_113P61574 105 aa5.95□□□□□ -1.46
SHKBP1-210ENST00000595874 GAGE2AQ6NT46 116 aa5.95□□□□□ -1.46
SHKBP1-210ENST00000595874 MAP1LC3CQ9BXW4 147 aa5.95□□□□□ -1.46
SHKBP1-210ENST00000595874 IGLV9-49A0A0B4J1Y8 123 aa5.94□□□□□ -1.46
SHKBP1-210ENST00000595874 EIF4EBP3O60516 100 aaPredicted RBP5.94□□□□□ -1.46
SHKBP1-210ENST00000595874 ERC2-IT1O76042 136 aa5.94□□□□□ -1.46
SHKBP1-210ENST00000595874 PLNP26678 52 aa5.94□□□□□ -1.46
SHKBP1-210ENST00000595874 DDTP30046 118 aa5.94□□□□□ -1.46
SHKBP1-210ENST00000595874 SOSTDC1Q6X4U4 206 aa5.94□□□□□ -1.46
SHKBP1-210ENST00000595874 Q8NBF4 154 aa5.93□□□□□ -1.46
SHKBP1-210ENST00000595874 MIEN1Q9BRT3 115 aa5.93□□□□□ -1.46
SHKBP1-210ENST00000595874 IGLV7-46A0A075B6I9 117 aa5.92□□□□□ -1.46
SHKBP1-210ENST00000595874 S100A7L2Q5SY68 101 aa5.92□□□□□ -1.46
SHKBP1-210ENST00000595874 ADAMTSL4-AS1Q5T5F5 129 aa5.92□□□□□ -1.46
SHKBP1-210ENST00000595874 TTTY13Q9BZ97 58 aa5.92□□□□□ -1.46
SHKBP1-210ENST00000595874 KCNQ1DNQ9H478 68 aa5.92□□□□□ -1.46
SHKBP1-210ENST00000595874 A0A0J9YXY3 114 aa5.91□□□□□ -1.46
SHKBP1-210ENST00000595874 LINC00587B1AMM8 73 aa5.91□□□□□ -1.46
SHKBP1-210ENST00000595874 B5MCH6 92 aa5.91□□□□□ -1.46
SHKBP1-210ENST00000595874 SPRR1AP35321 89 aa5.91□□□□□ -1.46
SHKBP1-210ENST00000595874 MOBPQ13875 183 aa5.91□□□□□ -1.46
SHKBP1-210ENST00000595874 LINC00337Q8N6G1 96 aa5.91□□□□□ -1.46
SHKBP1-210ENST00000595874 ZNF706Q9Y5V0 76 aaPredicted RBP5.91□□□□□ -1.46
SHKBP1-210ENST00000595874 MUC17Q685J3 4493 aa5.9□□□□□ -1.46
SHKBP1-210ENST00000595874 KRTAP4-16G5E9R7 235 aaPredicted RBP5.9□□□□□ -1.46
SHKBP1-210ENST00000595874 HIST1H2BKO60814 126 aa5.9□□□□□ -1.46
SHKBP1-210ENST00000595874 HIST1H2BJP06899 126 aa5.9□□□□□ -1.46
SHKBP1-210ENST00000595874 HIST1H2BOP23527 126 aa5.9□□□□□ -1.46
SHKBP1-210ENST00000595874 HIST1H2BBP33778 126 aa5.9□□□□□ -1.46
SHKBP1-210ENST00000595874 HIST1H2BDP58876 126 aa5.9□□□□□ -1.46
SHKBP1-210ENST00000595874 HIST1H2BCP62807 126 aa5.9□□□□□ -1.46
SHKBP1-210ENST00000595874 HIST2H2BEQ16778 126 aa5.9□□□□□ -1.46
SHKBP1-210ENST00000595874 C4orf48Q5BLP8 95 aa5.9□□□□□ -1.46
SHKBP1-210ENST00000595874 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.9□□□□□ -1.46
SHKBP1-210ENST00000595874 HIST1H2BHQ93079 126 aa5.9□□□□□ -1.46
SHKBP1-210ENST00000595874 HIST1H2BNQ99877 126 aa5.9□□□□□ -1.46
SHKBP1-210ENST00000595874 HIST1H2BMQ99879 126 aa5.9□□□□□ -1.46
SHKBP1-210ENST00000595874 Q9BRP9 147 aa5.9□□□□□ -1.46
SHKBP1-210ENST00000595874 CDIP1Q9H305 208 aa5.9□□□□□ -1.46
SHKBP1-210ENST00000595874 SYS1-DBNDD2H3BUS1 97 aa5.89□□□□□ -1.47
SHKBP1-210ENST00000595874 S100A12P80511 92 aa5.89□□□□□ -1.47
SHKBP1-210ENST00000595874 ST20-AS1Q8NBB2 130 aa5.89□□□□□ -1.47
SHKBP1-210ENST00000595874 OR13C6PQ8NH95 151 aa5.89□□□□□ -1.47
SHKBP1-210ENST00000595874 SPANXB1Q9NS25 103 aaPredicted RBP5.89□□□□□ -1.47
SHKBP1-210ENST00000595874 TRAV23DV6A0A075B6W5 121 aa5.88□□□□□ -1.47
SHKBP1-210ENST00000595874 E9PLD3 99 aa5.88□□□□□ -1.47
SHKBP1-210ENST00000595874 NMUP48645 174 aa5.88□□□□□ -1.47
SHKBP1-210ENST00000595874 KRTDAPP60985 99 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms