RNA–Protein interactions for RNA: ENST00000595756.1

HOMER3-208, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-208ENST00000595756 MYMXA0A1B0GTQ4 84 aa11□□□□□ -0.65
HOMER3-208ENST00000595756 NMUP48645 174 aa11□□□□□ -0.65
HOMER3-208ENST00000595756 HIST1H2BLQ99880 126 aa11□□□□□ -0.65
HOMER3-208ENST00000595756 ERG28Q9UKR5 140 aa11□□□□□ -0.65
HOMER3-208ENST00000595756 SNRPEP62304 92 aaKnown RBP10.99□□□□□ -0.65
HOMER3-208ENST00000595756 NDUFA12Q9UI09 145 aa10.99□□□□□ -0.65
HOMER3-208ENST00000595756 C5orf52A6NGY3 159 aa10.98□□□□□ -0.65
HOMER3-208ENST00000595756 E9PLD3 99 aa10.98□□□□□ -0.65
HOMER3-208ENST00000595756 J3QQQ9 107 aa10.98□□□□□ -0.65
HOMER3-208ENST00000595756 LGALS3P17931 250 aaKnown RBP10.98□□□□□ -0.65
HOMER3-208ENST00000595756 PFN2P35080 140 aa10.98□□□□□ -0.65
HOMER3-208ENST00000595756 PHF5AQ7RTV0 110 aaKnown RBP10.98□□□□□ -0.65
HOMER3-208ENST00000595756 C9orf129Q5T035 196 aaKnown RBP10.97□□□□□ -0.65
HOMER3-208ENST00000595756 RNF213Q63HN8 5207 aa10.96□□□□□ -0.65
HOMER3-208ENST00000595756 C1orf137Q5JT78 98 aa10.96□□□□□ -0.65
HOMER3-208ENST00000595756 XAGE1AQ9HD64 81 aa10.96□□□□□ -0.65
HOMER3-208ENST00000595756 LINC00158P58513 81 aa10.94□□□□□ -0.66
HOMER3-208ENST00000595756 MEIG1Q5JSS6 88 aa10.94□□□□□ -0.66
HOMER3-208ENST00000595756 FAM19A5Q7Z5A7 132 aaPredicted RBP10.94□□□□□ -0.66
HOMER3-208ENST00000595756 FAM168BA1KXE4 195 aa10.93□□□□□ -0.66
HOMER3-208ENST00000595756 TSPEAR-AS2P59090 65 aa10.92□□□□□ -0.66
HOMER3-208ENST00000595756 M0QXV9 152 aa10.91□□□□□ -0.66
HOMER3-208ENST00000595756 IGLV7-43P04211 117 aa10.91□□□□□ -0.66
HOMER3-208ENST00000595756 LBHQ53QV2 105 aaPredicted RBP10.91□□□□□ -0.66
HOMER3-208ENST00000595756 SND1-IT1Q9HBX3 110 aa10.91□□□□□ -0.66
HOMER3-208ENST00000595756 TP73-AS1Q9UF72 201 aa10.91□□□□□ -0.66
HOMER3-208ENST00000595756 SMIM13P0DJ93 91 aa10.9□□□□□ -0.66
HOMER3-208ENST00000595756 DIRC1Q969H9 104 aa10.9□□□□□ -0.66
HOMER3-208ENST00000595756 RPL24P83731 157 aaKnown RBP10.89□□□□□ -0.67
HOMER3-208ENST00000595756 C22orf24Q9Y442 160 aa10.89□□□□□ -0.67
HOMER3-208ENST00000595756 KRTAP11-1Q8IUC1 163 aa10.88□□□□□ -0.67
HOMER3-208ENST00000595756 KRTAP7-1Q8IUC3 87 aa10.88□□□□□ -0.67
HOMER3-208ENST00000595756 IGLV5-37A0A075B6J1 123 aa10.87□□□□□ -0.67
HOMER3-208ENST00000595756 A0A0U1RRA0 63 aa10.87□□□□□ -0.67
HOMER3-208ENST00000595756 H0Y9J4 135 aa10.87□□□□□ -0.67
HOMER3-208ENST00000595756 UBE2BP63146 152 aa10.87□□□□□ -0.67
HOMER3-208ENST00000595756 NKAPP1Q8N9T2 125 aa10.87□□□□□ -0.67
HOMER3-208ENST00000595756 HSBP1L1C9JCN9 74 aa10.86□□□□□ -0.67
HOMER3-208ENST00000595756 ATOH7Q8N100 152 aa10.86□□□□□ -0.67
HOMER3-208ENST00000595756 MIR7-3HGQ8N6C7 128 aa10.86□□□□□ -0.67
HOMER3-208ENST00000595756 A0A0J9YXY3 114 aa10.85□□□□□ -0.67
HOMER3-208ENST00000595756 SCGB1D1O95968 90 aa10.85□□□□□ -0.67
HOMER3-208ENST00000595756 MRPL55Q7Z7F7 128 aaKnown RBP10.85□□□□□ -0.67
HOMER3-208ENST00000595756 LPAP08519 4548 aa10.85□□□□□ -0.67
HOMER3-208ENST00000595756 IGKV2D-26A0A0A0MRZ7 120 aa10.84□□□□□ -0.67
HOMER3-208ENST00000595756 ZNF815PA8K554 130 aa10.84□□□□□ -0.67
HOMER3-208ENST00000595756 TIMM17BO60830 172 aa10.82□□□□□ -0.68
HOMER3-208ENST00000595756 ANKRD39Q53RE8 183 aa10.82□□□□□ -0.68
HOMER3-208ENST00000595756 MIEN1Q9BRT3 115 aa10.82□□□□□ -0.68
HOMER3-208ENST00000595756 LOC107984156A0A0G2JMH3 177 aa10.81□□□□□ -0.68
HOMER3-208ENST00000595756 VPREB1P12018 145 aa10.81□□□□□ -0.68
HOMER3-208ENST00000595756 ARL17AQ8IVW1 177 aa10.81□□□□□ -0.68
HOMER3-208ENST00000595756 PRR26Q8N8Z3 221 aa10.81□□□□□ -0.68
HOMER3-208ENST00000595756 IGLV1-50A0A075B6I6 118 aa10.8□□□□□ -0.68
HOMER3-208ENST00000595756 BOD1L2Q8IYS8 172 aa10.8□□□□□ -0.68
HOMER3-208ENST00000595756 LINC00167Q96N53 147 aa10.8□□□□□ -0.68
HOMER3-208ENST00000595756 KRTAP1-4P0C5Y4 121 aa10.79□□□□□ -0.68
HOMER3-208ENST00000595756 TMA7Q9Y2S6 64 aaKnown RBP10.79□□□□□ -0.68
HOMER3-208ENST00000595756 SCGB1D4Q6XE38 83 aa10.78□□□□□ -0.68
HOMER3-208ENST00000595756 M0R378 163 aa10.77□□□□□ -0.69
HOMER3-208ENST00000595756 DAND5Q8N907 189 aa10.77□□□□□ -0.69
HOMER3-208ENST00000595756 TMEM238C9JI98 176 aa10.76□□□□□ -0.69
HOMER3-208ENST00000595756 TTTY13Q9BZ97 58 aa10.76□□□□□ -0.69
HOMER3-208ENST00000595756 GAGE10A6NGK3 116 aa10.75□□□□□ -0.69
HOMER3-208ENST00000595756 NDUFC2O95298 119 aa10.75□□□□□ -0.69
HOMER3-208ENST00000595756 JOSD1Q15040 202 aaPredicted RBP10.75□□□□□ -0.69
HOMER3-208ENST00000595756 COPS9Q8WXC6 57 aa10.75□□□□□ -0.69
HOMER3-208ENST00000595756 RPL37AP8A6NKH3 93 aa10.74□□□□□ -0.69
HOMER3-208ENST00000595756 RPL13AP40429 203 aaKnown RBP10.74□□□□□ -0.69
HOMER3-208ENST00000595756 ADAMTSL4-AS1Q5T5F5 129 aa10.74□□□□□ -0.69
HOMER3-208ENST00000595756 Q6ZVH6 145 aa10.74□□□□□ -0.69
HOMER3-208ENST00000595756 PCP2Q8IVA1 136 aa10.74□□□□□ -0.69
HOMER3-208ENST00000595756 LITAFQ99732 161 aa10.74□□□□□ -0.69
HOMER3-208ENST00000595756 TRBV10-2A0A0K0K1G8 114 aa10.73□□□□□ -0.69
HOMER3-208ENST00000595756 ZNF861PO60384 105 aa10.73□□□□□ -0.69
HOMER3-208ENST00000595756 S100A12P80511 92 aa10.72□□□□□ -0.69
HOMER3-208ENST00000595756 Q8NDZ9 215 aa10.72□□□□□ -0.69
HOMER3-208ENST00000595756 SPANXB1Q9NS25 103 aaPredicted RBP10.72□□□□□ -0.69
HOMER3-208ENST00000595756 IGKV2-28A0A075B6P5 120 aa10.71□□□□□ -0.69
HOMER3-208ENST00000595756 IGKV2D-28P01615 120 aa10.71□□□□□ -0.69
HOMER3-208ENST00000595756 LINC00308Q8TCZ7 52 aa10.71□□□□□ -0.69
HOMER3-208ENST00000595756 SPANXDQ9BXN6 97 aa10.71□□□□□ -0.69
HOMER3-208ENST00000595756 SPANXCQ9NY87 97 aa10.71□□□□□ -0.69
HOMER3-208ENST00000595756 BCE1O60756 84 aa10.7□□□□□ -0.7
HOMER3-208ENST00000595756 IFITM1P13164 125 aa10.7□□□□□ -0.7
HOMER3-208ENST00000595756 PPDPFQ9H3Y8 114 aa10.7□□□□□ -0.7
HOMER3-208ENST00000595756 NCR3O14931 201 aa10.69□□□□□ -0.7
HOMER3-208ENST00000595756 NPC2P61916 151 aa10.69□□□□□ -0.7
HOMER3-208ENST00000595756 SOSTDC1Q6X4U4 206 aa10.68□□□□□ -0.7
HOMER3-208ENST00000595756 VAMP8Q9BV40 100 aa10.68□□□□□ -0.7
HOMER3-208ENST00000595756 RPL28P46779 137 aaKnown RBP10.67□□□□□ -0.7
HOMER3-208ENST00000595756 CBY1Q9Y3M2 126 aa10.67□□□□□ -0.7
HOMER3-208ENST00000595756 DLEU1O43261 78 aa10.66□□□□□ -0.7
HOMER3-208ENST00000595756 COX8AP10176 69 aa10.66□□□□□ -0.7
HOMER3-208ENST00000595756 S100A7L2Q5SY68 101 aa10.66□□□□□ -0.7
HOMER3-208ENST00000595756 LINC00518Q8N0U6 118 aa10.66□□□□□ -0.7
HOMER3-208ENST00000595756 TMEM126AQ9H061 195 aa10.66□□□□□ -0.7
HOMER3-208ENST00000595756 PRYO14603 147 aa10.65□□□□□ -0.7
HOMER3-208ENST00000595756 DDTP30046 118 aa10.65□□□□□ -0.7
HOMER3-208ENST00000595756 SPATA45Q537H7 98 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms