RNA–Protein interactions for RNA: ENST00000595681.5

SH2D3A-204, Transcript of SH2 domain containing 3A, humanhuman

TSL 5

Gene SH2D3A, Length 1,750 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-204ENST00000595681 A0A0U1RRA0 63 aa12.85□□□□□ -0.35
SH2D3A-204ENST00000595681 TSPEAR-AS2P59090 65 aa12.85□□□□□ -0.35
SH2D3A-204ENST00000595681 TSTD3H0UI37 97 aa12.84□□□□□ -0.35
SH2D3A-204ENST00000595681 C22orf24Q9Y442 160 aa12.84□□□□□ -0.35
SH2D3A-204ENST00000595681 UBE2BP63146 152 aa12.83□□□□□ -0.36
SH2D3A-204ENST00000595681 C1orf137Q5JT78 98 aa12.82□□□□□ -0.36
SH2D3A-204ENST00000595681 J3QL48 77 aa12.81□□□□□ -0.36
SH2D3A-204ENST00000595681 C3orf79P0CE67 100 aa12.81□□□□□ -0.36
SH2D3A-204ENST00000595681 KRTDAPP60985 99 aa12.81□□□□□ -0.36
SH2D3A-204ENST00000595681 SND1-IT1Q9HBX3 110 aa12.81□□□□□ -0.36
SH2D3A-204ENST00000595681 SFTA2Q6UW10 78 aa12.81□□□□□ -0.36
SH2D3A-204ENST00000595681 NDUFA12Q9UI09 145 aa12.81□□□□□ -0.36
SH2D3A-204ENST00000595681 LEPROTO15243 131 aa12.8□□□□□ -0.36
SH2D3A-204ENST00000595681 LINC00158P58513 81 aa12.8□□□□□ -0.36
SH2D3A-204ENST00000595681 COX17Q14061 63 aa12.79□□□□□ -0.36
SH2D3A-204ENST00000595681 SMIM13P0DJ93 91 aa12.79□□□□□ -0.36
SH2D3A-204ENST00000595681 HERVK_113P61574 105 aa12.79□□□□□ -0.36
SH2D3A-204ENST00000595681 LINC01545Q5VT33 79 aa12.79□□□□□ -0.36
SH2D3A-204ENST00000595681 OXTP01178 125 aa12.78□□□□□ -0.36
SH2D3A-204ENST00000595681 SRSF9Q13242 221 aaKnown RBP eCLIP12.78□□□□□ -0.36
SH2D3A-204ENST00000595681 MEIG1Q5JSS6 88 aa12.78□□□□□ -0.36
SH2D3A-204ENST00000595681 PET117Q6UWS5 81 aa12.78□□□□□ -0.36
SH2D3A-204ENST00000595681 GAGE10A6NGK3 116 aa12.77□□□□□ -0.36
SH2D3A-204ENST00000595681 J3QQQ9 107 aa12.77□□□□□ -0.36
SH2D3A-204ENST00000595681 DDTP30046 118 aa12.77□□□□□ -0.36
SH2D3A-204ENST00000595681 MRPL55Q7Z7F7 128 aaKnown RBP12.77□□□□□ -0.36
SH2D3A-204ENST00000595681 PLEKHB2Q96CS7 222 aa12.77□□□□□ -0.36
SH2D3A-204ENST00000595681 MYMXA0A1B0GTQ4 84 aa12.76□□□□□ -0.37
SH2D3A-204ENST00000595681 Q8NDZ9 215 aa12.76□□□□□ -0.37
SH2D3A-204ENST00000595681 PLA2G2DQ9UNK4 145 aa12.76□□□□□ -0.37
SH2D3A-204ENST00000595681 RPL37AP8A6NKH3 93 aa12.74□□□□□ -0.37
SH2D3A-204ENST00000595681 HERV-K104P63124 156 aa12.74□□□□□ -0.37
SH2D3A-204ENST00000595681 LINC00167Q96N53 147 aa12.74□□□□□ -0.37
SH2D3A-204ENST00000595681 LGALS3P17931 250 aaKnown RBP12.74□□□□□ -0.37
SH2D3A-204ENST00000595681 CTAG1AP78358 180 aa12.74□□□□□ -0.37
SH2D3A-204ENST00000595681 LBHQ53QV2 105 aaPredicted RBP12.74□□□□□ -0.37
SH2D3A-204ENST00000595681 SPINK6Q6UWN8 80 aa12.74□□□□□ -0.37
SH2D3A-204ENST00000595681 NKAPP1Q8N9T2 125 aa12.74□□□□□ -0.37
SH2D3A-204ENST00000595681 TP73-AS1Q9UF72 201 aa12.74□□□□□ -0.37
SH2D3A-204ENST00000595681 IGLV7-43P04211 117 aa12.72□□□□□ -0.37
SH2D3A-204ENST00000595681 VPREB1P12018 145 aa12.72□□□□□ -0.37
SH2D3A-204ENST00000595681 MIR7-3HGQ8N6C7 128 aa12.72□□□□□ -0.37
SH2D3A-204ENST00000595681 IGLV5-37A0A075B6J1 123 aa12.71□□□□□ -0.37
SH2D3A-204ENST00000595681 E9PLD3 99 aa12.71□□□□□ -0.37
SH2D3A-204ENST00000595681 MT1HL1P0DM35 61 aa12.71□□□□□ -0.37
SH2D3A-204ENST00000595681 VAMP8Q9BV40 100 aa12.71□□□□□ -0.37
SH2D3A-204ENST00000595681 DAND5Q8N907 189 aa12.71□□□□□ -0.38
SH2D3A-204ENST00000595681 TNXBP22105 4242 aa12.7□□□□□ -0.38
SH2D3A-204ENST00000595681 C14orf144Q96I85 54 aa12.7□□□□□ -0.38
SH2D3A-204ENST00000595681 PAM16Q9Y3D7 125 aa12.7□□□□□ -0.38
SH2D3A-204ENST00000595681 ATOH7Q8N100 152 aa12.69□□□□□ -0.38
SH2D3A-204ENST00000595681 IGKV2-28A0A075B6P5 120 aa12.69□□□□□ -0.38
SH2D3A-204ENST00000595681 IGKV2D-28P01615 120 aa12.69□□□□□ -0.38
SH2D3A-204ENST00000595681 NMUP48645 174 aa12.68□□□□□ -0.38
SH2D3A-204ENST00000595681 IGKV2D-26A0A0A0MRZ7 120 aa12.67□□□□□ -0.38
SH2D3A-204ENST00000595681 RPL24P83731 157 aaKnown RBP12.66□□□□□ -0.38
SH2D3A-204ENST00000595681 TTTY13Q9BZ97 58 aa12.66□□□□□ -0.38
SH2D3A-204ENST00000595681 C20orf202A1L168 122 aa12.66□□□□□ -0.38
SH2D3A-204ENST00000595681 BOD1L2Q8IYS8 172 aa12.66□□□□□ -0.38
SH2D3A-204ENST00000595681 SPATA45Q537H7 98 aa12.64□□□□□ -0.39
SH2D3A-204ENST00000595681 A0A0J9YXY3 114 aa12.64□□□□□ -0.39
SH2D3A-204ENST00000595681 LINC01600Q96MT4 127 aa12.64□□□□□ -0.39
SH2D3A-204ENST00000595681 REG3GQ6UW15 175 aa12.62□□□□□ -0.39
SH2D3A-204ENST00000595681 IGLV1-50A0A075B6I6 118 aa12.61□□□□□ -0.39
SH2D3A-204ENST00000595681 NCR3O14931 201 aa12.61□□□□□ -0.39
SH2D3A-204ENST00000595681 NPC2P61916 151 aa12.61□□□□□ -0.39
SH2D3A-204ENST00000595681 ANKRD39Q53RE8 183 aa12.61□□□□□ -0.39
SH2D3A-204ENST00000595681 MIEN1Q9BRT3 115 aa12.61□□□□□ -0.39
SH2D3A-204ENST00000595681 ADAMTSL4-AS1Q5T5F5 129 aa12.61□□□□□ -0.39
SH2D3A-204ENST00000595681 TMEM238C9JI98 176 aa12.6□□□□□ -0.39
SH2D3A-204ENST00000595681 DIRC1Q969H9 104 aa12.6□□□□□ -0.39
SH2D3A-204ENST00000595681 ZNF815PA8K554 130 aa12.59□□□□□ -0.39
SH2D3A-204ENST00000595681 H0Y9J4 135 aa12.59□□□□□ -0.39
SH2D3A-204ENST00000595681 BCE1O60756 84 aa12.59□□□□□ -0.39
SH2D3A-204ENST00000595681 ZNF861PO60384 105 aa12.58□□□□□ -0.39
SH2D3A-204ENST00000595681 EIF4EBP3O60516 100 aaPredicted RBP12.58□□□□□ -0.4
SH2D3A-204ENST00000595681 M0R378 163 aa12.57□□□□□ -0.4
SH2D3A-204ENST00000595681 SOSTDC1Q6X4U4 206 aa12.56□□□□□ -0.4
SH2D3A-204ENST00000595681 HMCN2Q8NDA2 5059 aa12.56□□□□□ -0.4
SH2D3A-204ENST00000595681 TMEM126AQ9H061 195 aa12.56□□□□□ -0.4
SH2D3A-204ENST00000595681 LITAFQ99732 161 aa12.55□□□□□ -0.4
SH2D3A-204ENST00000595681 LOC107984156A0A0G2JMH3 177 aa12.54□□□□□ -0.4
SH2D3A-204ENST00000595681 KRTAP10-8P60410 259 aa12.54□□□□□ -0.4
SH2D3A-204ENST00000595681 ARL17AQ8IVW1 177 aa12.54□□□□□ -0.4
SH2D3A-204ENST00000595681 UQCR10Q9UDW1 63 aa12.54□□□□□ -0.4
SH2D3A-204ENST00000595681 RPL28P46779 137 aaKnown RBP12.53□□□□□ -0.4
SH2D3A-204ENST00000595681 UBE2AP49459 152 aa12.53□□□□□ -0.4
SH2D3A-204ENST00000595681 PRLHP81277 87 aa12.53□□□□□ -0.4
SH2D3A-204ENST00000595681 SNHG12Q9BXW3 62 aa12.53□□□□□ -0.4
SH2D3A-204ENST00000595681 M0R143 59 aa12.52□□□□□ -0.41
SH2D3A-204ENST00000595681 KRTAP1-4P0C5Y4 121 aa12.52□□□□□ -0.41
SH2D3A-204ENST00000595681 FAM19A1Q7Z5A9 133 aa12.52□□□□□ -0.41
SH2D3A-204ENST00000595681 PCP2Q8IVA1 136 aa12.52□□□□□ -0.41
SH2D3A-204ENST00000595681 TRBV10-3A0A0K0K1G6 114 aa12.51□□□□□ -0.41
SH2D3A-204ENST00000595681 KRTAP13-1Q8IUC0 172 aa12.51□□□□□ -0.41
SH2D3A-204ENST00000595681 SCGB1D4Q6XE38 83 aa12.49□□□□□ -0.41
SH2D3A-204ENST00000595681 HSBP1L1C9JCN9 74 aa12.48□□□□□ -0.41
SH2D3A-204ENST00000595681 TIMM17BO60830 172 aa12.48□□□□□ -0.41
SH2D3A-204ENST00000595681 PRR26Q8N8Z3 221 aa12.48□□□□□ -0.41
SH2D3A-204ENST00000595681 LINC00308Q8TCZ7 52 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms