RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 Q8NDZ9 215 aa8.48□□□□□ -1.05
SHKBP1-207ENST00000595631 PLEKHB2Q96CS7 222 aa8.48□□□□□ -1.05
SHKBP1-207ENST00000595631 MEIG1Q5JSS6 88 aa8.47□□□□□ -1.05
SHKBP1-207ENST00000595631 PLA2G2DQ9UNK4 145 aa8.47□□□□□ -1.05
SHKBP1-207ENST00000595631 MYCBP2O75592 4640 aa8.46□□□□□ -1.05
SHKBP1-207ENST00000595631 MYMXA0A1B0GTQ4 84 aa8.46□□□□□ -1.06
SHKBP1-207ENST00000595631 GAGE10A6NGK3 116 aa8.46□□□□□ -1.06
SHKBP1-207ENST00000595631 LGALS3P17931 250 aaKnown RBP8.46□□□□□ -1.06
SHKBP1-207ENST00000595631 MRPL55Q7Z7F7 128 aaKnown RBP8.46□□□□□ -1.06
SHKBP1-207ENST00000595631 HIST1H2BLQ99880 126 aa8.46□□□□□ -1.06
SHKBP1-207ENST00000595631 IGLV5-37A0A075B6J1 123 aa8.45□□□□□ -1.06
SHKBP1-207ENST00000595631 RPL37AP8A6NKH3 93 aa8.45□□□□□ -1.06
SHKBP1-207ENST00000595631 E9PLD3 99 aa8.45□□□□□ -1.06
SHKBP1-207ENST00000595631 VPREB1P12018 145 aa8.45□□□□□ -1.06
SHKBP1-207ENST00000595631 HERV-K104P63124 156 aa8.45□□□□□ -1.06
SHKBP1-207ENST00000595631 SRSF9Q13242 221 aaKnown RBP eCLIP8.45□□□□□ -1.06
SHKBP1-207ENST00000595631 LINC00167Q96N53 147 aa8.45□□□□□ -1.06
SHKBP1-207ENST00000595631 TP73-AS1Q9UF72 201 aa8.45□□□□□ -1.06
SHKBP1-207ENST00000595631 KRTAP29-1A8MX34 341 aaPredicted RBP8.44□□□□□ -1.06
SHKBP1-207ENST00000595631 LBHQ53QV2 105 aaPredicted RBP8.44□□□□□ -1.06
SHKBP1-207ENST00000595631 MIR7-3HGQ8N6C7 128 aa8.44□□□□□ -1.06
SHKBP1-207ENST00000595631 NKAPP1Q8N9T2 125 aa8.44□□□□□ -1.06
SHKBP1-207ENST00000595631 LRP1Q07954 4544 aaKnown RBP8.43□□□□□ -1.06
SHKBP1-207ENST00000595631 IGKV2D-26A0A0A0MRZ7 120 aa8.43□□□□□ -1.06
SHKBP1-207ENST00000595631 J3QL48 77 aa8.43□□□□□ -1.06
SHKBP1-207ENST00000595631 IGLV7-43P04211 117 aa8.43□□□□□ -1.06
SHKBP1-207ENST00000595631 SPINK6Q6UWN8 80 aa8.43□□□□□ -1.06
SHKBP1-207ENST00000595631 ATOH7Q8N100 152 aa8.43□□□□□ -1.06
SHKBP1-207ENST00000595631 DAND5Q8N907 189 aa8.43□□□□□ -1.06
SHKBP1-207ENST00000595631 NMUP48645 174 aa8.42□□□□□ -1.06
SHKBP1-207ENST00000595631 FAT3Q8TDW7 4589 aa8.42□□□□□ -1.06
SHKBP1-207ENST00000595631 OXTP01178 125 aa8.41□□□□□ -1.06
SHKBP1-207ENST00000595631 AKR1D1P51857 326 aa8.41□□□□□ -1.06
SHKBP1-207ENST00000595631 TTTY13Q9BZ97 58 aa8.41□□□□□ -1.06
SHKBP1-207ENST00000595631 A0A0J9YXY3 114 aa8.4□□□□□ -1.06
SHKBP1-207ENST00000595631 C20orf202A1L168 122 aa8.4□□□□□ -1.06
SHKBP1-207ENST00000595631 IGKV2-28A0A075B6P5 120 aa8.39□□□□□ -1.07
SHKBP1-207ENST00000595631 IGKV2D-28P01615 120 aa8.39□□□□□ -1.07
SHKBP1-207ENST00000595631 RPL24P83731 157 aaKnown RBP8.39□□□□□ -1.07
SHKBP1-207ENST00000595631 ANKRD39Q53RE8 183 aa8.39□□□□□ -1.07
SHKBP1-207ENST00000595631 BOD1L2Q8IYS8 172 aa8.39□□□□□ -1.07
SHKBP1-207ENST00000595631 DMBT1Q9UGM3 2413 aaPredicted RBP8.38□□□□□ -1.07
SHKBP1-207ENST00000595631 LINC00587B1AMM8 73 aa8.38□□□□□ -1.07
SHKBP1-207ENST00000595631 NCR3O14931 201 aa8.37□□□□□ -1.07
SHKBP1-207ENST00000595631 MT1HL1P0DM35 61 aa8.37□□□□□ -1.07
SHKBP1-207ENST00000595631 JOSD1Q15040 202 aaPredicted RBP8.37□□□□□ -1.07
SHKBP1-207ENST00000595631 ADAMTSL4-AS1Q5T5F5 129 aa8.37□□□□□ -1.07
SHKBP1-207ENST00000595631 IGLV1-50A0A075B6I6 118 aa8.36□□□□□ -1.07
SHKBP1-207ENST00000595631 ZNF815PA8K554 130 aa8.36□□□□□ -1.07
SHKBP1-207ENST00000595631 TMEM238C9JI98 176 aa8.36□□□□□ -1.07
SHKBP1-207ENST00000595631 EIF4EBP3O60516 100 aaPredicted RBP8.36□□□□□ -1.07
SHKBP1-207ENST00000595631 SMIM6P0DI80 62 aa8.36□□□□□ -1.07
SHKBP1-207ENST00000595631 NPC2P61916 151 aa8.36□□□□□ -1.07
SHKBP1-207ENST00000595631 BCE1O60756 84 aa8.35□□□□□ -1.07
SHKBP1-207ENST00000595631 REG3GQ6UW15 175 aa8.35□□□□□ -1.07
SHKBP1-207ENST00000595631 SOSTDC1Q6X4U4 206 aa8.35□□□□□ -1.07
SHKBP1-207ENST00000595631 H0Y9J4 135 aa8.34□□□□□ -1.07
SHKBP1-207ENST00000595631 M0R378 163 aa8.34□□□□□ -1.07
SHKBP1-207ENST00000595631 DIRC1Q969H9 104 aa8.34□□□□□ -1.07
SHKBP1-207ENST00000595631 LINC01600Q96MT4 127 aa8.34□□□□□ -1.07
SHKBP1-207ENST00000595631 LITAFQ99732 161 aa8.34□□□□□ -1.07
SHKBP1-207ENST00000595631 ZNF861PO60384 105 aa8.33□□□□□ -1.08
SHKBP1-207ENST00000595631 LINC00518Q8N0U6 118 aa8.33□□□□□ -1.08
SHKBP1-207ENST00000595631 LOC107984156A0A0G2JMH3 177 aa8.32□□□□□ -1.08
SHKBP1-207ENST00000595631 SCGB1D1O95968 90 aa8.32□□□□□ -1.08
SHKBP1-207ENST00000595631 PYY3Q5JQD4 70 aa8.32□□□□□ -1.08
SHKBP1-207ENST00000595631 PCP2Q8IVA1 136 aa8.32□□□□□ -1.08
SHKBP1-207ENST00000595631 ARL17AQ8IVW1 177 aa8.32□□□□□ -1.08
SHKBP1-207ENST00000595631 TMEM126AQ9H061 195 aa8.32□□□□□ -1.08
SHKBP1-207ENST00000595631 KRTAP13-1Q8IUC0 172 aa8.31□□□□□ -1.08
SHKBP1-207ENST00000595631 MIEN1Q9BRT3 115 aa8.31□□□□□ -1.08
SHKBP1-207ENST00000595631 TRBV10-3A0A0K0K1G6 114 aa8.3□□□□□ -1.08
SHKBP1-207ENST00000595631 UBE2AP49459 152 aa8.3□□□□□ -1.08
SHKBP1-207ENST00000595631 PRLHP81277 87 aa8.3□□□□□ -1.08
SHKBP1-207ENST00000595631 FAM19A1Q7Z5A9 133 aa8.3□□□□□ -1.08
SHKBP1-207ENST00000595631 TIMM17BO60830 172 aa8.29□□□□□ -1.08
SHKBP1-207ENST00000595631 KRTAP1-4P0C5Y4 121 aa8.29□□□□□ -1.08
SHKBP1-207ENST00000595631 RPL28P46779 137 aaKnown RBP8.29□□□□□ -1.08
SHKBP1-207ENST00000595631 C12orf57Q99622 126 aa8.29□□□□□ -1.08
SHKBP1-207ENST00000595631 TNXBP22105 4242 aa8.28□□□□□ -1.08
SHKBP1-207ENST00000595631 S100A12P80511 92 aa8.28□□□□□ -1.08
SHKBP1-207ENST00000595631 SCGB1D4Q6XE38 83 aa8.28□□□□□ -1.08
SHKBP1-207ENST00000595631 LINC00308Q8TCZ7 52 aa8.28□□□□□ -1.08
SHKBP1-207ENST00000595631 PRYO14603 147 aa8.27□□□□□ -1.09
SHKBP1-207ENST00000595631 KRTAP10-8P60410 259 aa8.27□□□□□ -1.09
SHKBP1-207ENST00000595631 PRR26Q8N8Z3 221 aa8.27□□□□□ -1.09
SHKBP1-207ENST00000595631 SPANXB1Q9NS25 103 aaPredicted RBP8.27□□□□□ -1.09
SHKBP1-207ENST00000595631 TRBV10-2A0A0K0K1G8 114 aa8.26□□□□□ -1.09
SHKBP1-207ENST00000595631 NDUFC2O95298 119 aa8.26□□□□□ -1.09
SHKBP1-207ENST00000595631 HSBP1L1C9JCN9 74 aa8.25□□□□□ -1.09
SHKBP1-207ENST00000595631 DDTP30046 118 aa8.25□□□□□ -1.09
SHKBP1-207ENST00000595631 KCNQ1DNQ9H478 68 aa8.25□□□□□ -1.09
SHKBP1-207ENST00000595631 SPANXDQ9BXN6 97 aa8.24□□□□□ -1.09
SHKBP1-207ENST00000595631 SPANXCQ9NY87 97 aa8.24□□□□□ -1.09
SHKBP1-207ENST00000595631 KRTAP4-16G5E9R7 235 aaPredicted RBP8.23□□□□□ -1.09
SHKBP1-207ENST00000595631 SPRR1AP35321 89 aa8.23□□□□□ -1.09
SHKBP1-207ENST00000595631 S100A7L2Q5SY68 101 aa8.23□□□□□ -1.09
SHKBP1-207ENST00000595631 HERC1Q15751 4861 aa8.22□□□□□ -1.09
SHKBP1-207ENST00000595631 IGLV6-57P01721 117 aa8.22□□□□□ -1.09
SHKBP1-207ENST00000595631 HIGD2AQ9BW72 106 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms