RNA–Protein interactions for RNA: ENST00000595101.5

USE1-206, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2 BASIC

Gene USE1, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-206ENST00000595101 FAM168BA1KXE4 195 aa9.63□□□□□ -0.87
USE1-206ENST00000595101 LRP1Q07954 4544 aaKnown RBP9.63□□□□□ -0.87
USE1-206ENST00000595101 TRBV30A0A0K0K1B3 111 aa9.63□□□□□ -0.87
USE1-206ENST00000595101 TLX1NBP0CAT3 122 aa9.62□□□□□ -0.87
USE1-206ENST00000595101 COX7B2Q8TF08 81 aa9.62□□□□□ -0.87
USE1-206ENST00000595101 ERG28Q9UKR5 140 aa9.61□□□□□ -0.87
USE1-206ENST00000595101 PKIGQ9Y2B9 76 aa9.61□□□□□ -0.87
USE1-206ENST00000595101 NDUFC2-KCTD14E9PQ53 114 aa9.6□□□□□ -0.87
USE1-206ENST00000595101 F8VRH5 84 aa9.6□□□□□ -0.87
USE1-206ENST00000595101 KRTAP7-1Q8IUC3 87 aa9.6□□□□□ -0.87
USE1-206ENST00000595101 IGLV5-39A0A0G2JS06 123 aa9.59□□□□□ -0.87
USE1-206ENST00000595101 H3BRM9 83 aa9.59□□□□□ -0.87
USE1-206ENST00000595101 C9orf129Q5T035 196 aaKnown RBP9.59□□□□□ -0.87
USE1-206ENST00000595101 TMEM170BQ5T4T1 132 aa9.59□□□□□ -0.87
USE1-206ENST00000595101 HSPB8Q9UJY1 196 aa9.59□□□□□ -0.87
USE1-206ENST00000595101 TRAV12-1A0A0B4J245 112 aa9.58□□□□□ -0.88
USE1-206ENST00000595101 LEPROTL1O95214 131 aa9.58□□□□□ -0.88
USE1-206ENST00000595101 HERC1Q15751 4861 aa9.58□□□□□ -0.88
USE1-206ENST00000595101 PHF5AQ7RTV0 110 aaKnown RBP9.58□□□□□ -0.88
USE1-206ENST00000595101 SPANXCQ9NY87 97 aa9.58□□□□□ -0.88
USE1-206ENST00000595101 PKHD1L1Q86WI1 4243 aa9.57□□□□□ -0.88
USE1-206ENST00000595101 C7orf33Q8WU49 177 aa9.57□□□□□ -0.88
USE1-206ENST00000595101 FAM19A5Q7Z5A7 132 aaPredicted RBP9.56□□□□□ -0.88
USE1-206ENST00000595101 XAGE1AQ9HD64 81 aa9.56□□□□□ -0.88
USE1-206ENST00000595101 FAT3Q8TDW7 4589 aa9.56□□□□□ -0.88
USE1-206ENST00000595101 CXCL5P42830 114 aa9.55□□□□□ -0.88
USE1-206ENST00000595101 KRTAP11-1Q8IUC1 163 aa9.55□□□□□ -0.88
USE1-206ENST00000595101 J3QR89 54 aa9.55□□□□□ -0.88
USE1-206ENST00000595101 PMCHL2Q9BQD1 86 aa9.55□□□□□ -0.88
USE1-206ENST00000595101 TMEM126AQ9H061 195 aa9.55□□□□□ -0.88
USE1-206ENST00000595101 TMEM223A0PJW6 202 aa9.54□□□□□ -0.88
USE1-206ENST00000595101 PRR3P79522 188 aaKnown RBP9.54□□□□□ -0.88
USE1-206ENST00000595101 HSD52Q0P140 79 aa9.53□□□□□ -0.88
USE1-206ENST00000595101 SERTAD4-AS1Q5TG53 156 aa9.53□□□□□ -0.88
USE1-206ENST00000595101 ZNF625Q96I27 306 aaPredicted RBP9.53□□□□□ -0.88
USE1-206ENST00000595101 UQCR10Q9UDW1 63 aa9.53□□□□□ -0.88
USE1-206ENST00000595101 GTF2H5Q6ZYL4 71 aa9.52□□□□□ -0.88
USE1-206ENST00000595101 BATFQ16520 125 aa9.51□□□□□ -0.89
USE1-206ENST00000595101 PFN2P35080 140 aa9.5□□□□□ -0.89
USE1-206ENST00000595101 RPL24P83731 157 aaKnown RBP9.5□□□□□ -0.89
USE1-206ENST00000595101 PSORS1C2Q9UIG4 136 aa9.5□□□□□ -0.89
USE1-206ENST00000595101 OR13C6PQ8NH95 151 aa9.48□□□□□ -0.89
USE1-206ENST00000595101 DMBT1Q9UGM3 2413 aaPredicted RBP9.47□□□□□ -0.89
USE1-206ENST00000595101 PPDPFQ9H3Y8 114 aa9.47□□□□□ -0.89
USE1-206ENST00000595101 C22orf24Q9Y442 160 aa9.47□□□□□ -0.89
USE1-206ENST00000595101 TSPEAR-AS2P59090 65 aa9.46□□□□□ -0.9
USE1-206ENST00000595101 A0A0U1RRA0 63 aa9.45□□□□□ -0.9
USE1-206ENST00000595101 KRTAP29-1A8MX34 341 aaPredicted RBP9.45□□□□□ -0.9
USE1-206ENST00000595101 VAMP8Q9BV40 100 aa9.45□□□□□ -0.9
USE1-206ENST00000595101 SYS1-DBNDD2H3BUS1 97 aa9.45□□□□□ -0.9
USE1-206ENST00000595101 DPM2O94777 84 aa9.45□□□□□ -0.9
USE1-206ENST00000595101 IGKCP01834 107 aa9.45□□□□□ -0.9
USE1-206ENST00000595101 C1orf137Q5JT78 98 aa9.45□□□□□ -0.9
USE1-206ENST00000595101 PLNP26678 52 aa9.44□□□□□ -0.9
USE1-206ENST00000595101 SRSF9Q13242 221 aaKnown RBP eCLIP9.44□□□□□ -0.9
USE1-206ENST00000595101 UBE2BP63146 152 aa9.43□□□□□ -0.9
USE1-206ENST00000595101 Q8NDZ9 215 aa9.43□□□□□ -0.9
USE1-206ENST00000595101 SND1-IT1Q9HBX3 110 aa9.43□□□□□ -0.9
USE1-206ENST00000595101 V9GYY9 64 aa9.43□□□□□ -0.9
USE1-206ENST00000595101 B5MCH6 92 aa9.42□□□□□ -0.9
USE1-206ENST00000595101 GAGE10A6NGK3 116 aa9.42□□□□□ -0.9
USE1-206ENST00000595101 J3QL48 77 aa9.42□□□□□ -0.9
USE1-206ENST00000595101 C3orf79P0CE67 100 aa9.42□□□□□ -0.9
USE1-206ENST00000595101 NDUFA12Q9UI09 145 aa9.42□□□□□ -0.9
USE1-206ENST00000595101 A0A1B0GX51 115 aa9.41□□□□□ -0.9
USE1-206ENST00000595101 LEPROTO15243 131 aa9.4□□□□□ -0.9
USE1-206ENST00000595101 SMIM13P0DJ93 91 aa9.4□□□□□ -0.9
USE1-206ENST00000595101 LINC00158P58513 81 aa9.4□□□□□ -0.9
USE1-206ENST00000595101 KRTDAPP60985 99 aa9.4□□□□□ -0.9
USE1-206ENST00000595101 RPS28P62857 69 aaKnown RBP9.4□□□□□ -0.9
USE1-206ENST00000595101 COX17Q14061 63 aa9.4□□□□□ -0.9
USE1-206ENST00000595101 MRPL55Q7Z7F7 128 aaKnown RBP9.4□□□□□ -0.9
USE1-206ENST00000595101 SPANXB1Q9NS25 103 aaPredicted RBP9.4□□□□□ -0.9
USE1-206ENST00000595101 RPL37AP8A6NKH3 93 aa9.4□□□□□ -0.91
USE1-206ENST00000595101 LINC01545Q5VT33 79 aa9.4□□□□□ -0.91
USE1-206ENST00000595101 LINC00167Q96N53 147 aa9.4□□□□□ -0.91
USE1-206ENST00000595101 ANAPC13Q9BS18 74 aa9.4□□□□□ -0.91
USE1-206ENST00000595101 OXTP01178 125 aa9.39□□□□□ -0.91
USE1-206ENST00000595101 SFTA2Q6UW10 78 aa9.39□□□□□ -0.91
USE1-206ENST00000595101 PLA2G2DQ9UNK4 145 aa9.39□□□□□ -0.91
USE1-206ENST00000595101 J3QQQ9 107 aa9.38□□□□□ -0.91
USE1-206ENST00000595101 TAX1BP3O14907 124 aa9.38□□□□□ -0.91
USE1-206ENST00000595101 IGLV7-43P04211 117 aa9.38□□□□□ -0.91
USE1-206ENST00000595101 SPINK6Q6UWN8 80 aa9.38□□□□□ -0.91
USE1-206ENST00000595101 TNXBP22105 4242 aa9.38□□□□□ -0.91
USE1-206ENST00000595101 GHRHP01286 108 aa9.37□□□□□ -0.91
USE1-206ENST00000595101 VPREB1P12018 145 aa9.37□□□□□ -0.91
USE1-206ENST00000595101 MEIG1Q5JSS6 88 aa9.37□□□□□ -0.91
USE1-206ENST00000595101 TP73-AS1Q9UF72 201 aa9.37□□□□□ -0.91
USE1-206ENST00000595101 IGLV5-37A0A075B6J1 123 aa9.37□□□□□ -0.91
USE1-206ENST00000595101 MT1HL1P0DM35 61 aa9.37□□□□□ -0.91
USE1-206ENST00000595101 PLEKHB2Q96CS7 222 aa9.37□□□□□ -0.91
USE1-206ENST00000595101 MYMXA0A1B0GTQ4 84 aa9.36□□□□□ -0.91
USE1-206ENST00000595101 HERVK_113P61574 105 aa9.36□□□□□ -0.91
USE1-206ENST00000595101 MIR7-3HGQ8N6C7 128 aa9.36□□□□□ -0.91
USE1-206ENST00000595101 DAND5Q8N907 189 aa9.36□□□□□ -0.91
USE1-206ENST00000595101 NKAPP1Q8N9T2 125 aa9.35□□□□□ -0.91
USE1-206ENST00000595101 IGKV2-28A0A075B6P5 120 aa9.34□□□□□ -0.91
USE1-206ENST00000595101 E9PLD3 99 aa9.34□□□□□ -0.91
USE1-206ENST00000595101 J3KT08 172 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms