RNA–Protein interactions for RNA: ENST00000594297.1

FOXA3-202, Transcript of forkhead box A3, humanhuman

TSL 3

Gene FOXA3, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-202ENST00000594297 C14orf144Q96I85 54 aa9.87□□□□□ -0.83
FOXA3-202ENST00000594297 TSTD3H0UI37 97 aa9.85□□□□□ -0.83
FOXA3-202ENST00000594297 LINC00158P58513 81 aa9.85□□□□□ -0.83
FOXA3-202ENST00000594297 BOD1L2Q8IYS8 172 aa9.85□□□□□ -0.83
FOXA3-202ENST00000594297 UQCR10Q9UDW1 63 aa9.85□□□□□ -0.83
FOXA3-202ENST00000594297 ERG28Q9UKR5 140 aa9.85□□□□□ -0.83
FOXA3-202ENST00000594297 A0A0J9YXY3 114 aa9.84□□□□□ -0.83
FOXA3-202ENST00000594297 TMEM238C9JI98 176 aa9.84□□□□□ -0.83
FOXA3-202ENST00000594297 C10orf25Q5T742 122 aa9.84□□□□□ -0.83
FOXA3-202ENST00000594297 C6orf48Q9UBA6 75 aa9.84□□□□□ -0.83
FOXA3-202ENST00000594297 LOC107984640A0A0U1RRK4 108 aa9.83□□□□□ -0.84
FOXA3-202ENST00000594297 TIMM17BO60830 172 aa9.83□□□□□ -0.84
FOXA3-202ENST00000594297 PFN2P35080 140 aa9.83□□□□□ -0.84
FOXA3-202ENST00000594297 C9orf163Q8N9P6 203 aa9.83□□□□□ -0.84
FOXA3-202ENST00000594297 COPS9Q8WXC6 57 aa9.83□□□□□ -0.84
FOXA3-202ENST00000594297 TTTY13Q9BZ97 58 aa9.83□□□□□ -0.84
FOXA3-202ENST00000594297 NDUFC2-KCTD14E9PQ53 114 aa9.81□□□□□ -0.84
FOXA3-202ENST00000594297 SLPIP03973 132 aa9.81□□□□□ -0.84
FOXA3-202ENST00000594297 SMIM13P0DJ93 91 aa9.81□□□□□ -0.84
FOXA3-202ENST00000594297 Q6ZVH6 145 aa9.81□□□□□ -0.84
FOXA3-202ENST00000594297 SRSF9Q13242 221 aaKnown RBP eCLIP9.8□□□□□ -0.84
FOXA3-202ENST00000594297 MIEN1Q9BRT3 115 aa9.8□□□□□ -0.84
FOXA3-202ENST00000594297 PRO1933Q9H354 126 aa9.8□□□□□ -0.84
FOXA3-202ENST00000594297 A0A0U1RRA0 63 aa9.79□□□□□ -0.84
FOXA3-202ENST00000594297 TLX1NBP0CAT3 122 aa9.79□□□□□ -0.84
FOXA3-202ENST00000594297 RPL18AQ02543 176 aaKnown RBP9.79□□□□□ -0.84
FOXA3-202ENST00000594297 C9orf116Q5BN46 136 aaPredicted RBP9.79□□□□□ -0.84
FOXA3-202ENST00000594297 HIGD1BQ9P298 99 aa9.79□□□□□ -0.84
FOXA3-202ENST00000594297 LINC00474Q9P2X8 69 aa9.79□□□□□ -0.84
FOXA3-202ENST00000594297 MIR7-3HGQ8N6C7 128 aa9.77□□□□□ -0.85
FOXA3-202ENST00000594297 IFITM1P13164 125 aa9.76□□□□□ -0.85
FOXA3-202ENST00000594297 GAGE2BQ13066 116 aa9.76□□□□□ -0.85
FOXA3-202ENST00000594297 GAGE2EQ4V326 116 aa9.76□□□□□ -0.85
FOXA3-202ENST00000594297 DPH3Q96FX2 82 aa9.76□□□□□ -0.85
FOXA3-202ENST00000594297 HIST1H4GQ99525 98 aa9.76□□□□□ -0.85
FOXA3-202ENST00000594297 SPANXB1Q9NS25 103 aaPredicted RBP9.76□□□□□ -0.85
FOXA3-202ENST00000594297 GAGE2DQ9UEU5 116 aa9.76□□□□□ -0.85
FOXA3-202ENST00000594297 SPANXDQ9BXN6 97 aa9.75□□□□□ -0.85
FOXA3-202ENST00000594297 SPANXCQ9NY87 97 aa9.75□□□□□ -0.85
FOXA3-202ENST00000594297 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.75□□□□□ -0.85
FOXA3-202ENST00000594297 PANO1I0J062 215 aa9.74□□□□□ -0.85
FOXA3-202ENST00000594297 TAL2Q16559 108 aa9.74□□□□□ -0.85
FOXA3-202ENST00000594297 PTTG1IPP53801 180 aa9.73□□□□□ -0.85
FOXA3-202ENST00000594297 SDIM1Q6ZPB5 146 aa9.73□□□□□ -0.85
FOXA3-202ENST00000594297 Q6ZRP5 223 aa9.73□□□□□ -0.85
FOXA3-202ENST00000594297 SND1-IT1Q9HBX3 110 aa9.73□□□□□ -0.85
FOXA3-202ENST00000594297 RPL24P83731 157 aaKnown RBP9.72□□□□□ -0.85
FOXA3-202ENST00000594297 ADAMTSL4-AS1Q5T5F5 129 aa9.72□□□□□ -0.85
FOXA3-202ENST00000594297 DAND5Q8N907 189 aa9.72□□□□□ -0.85
FOXA3-202ENST00000594297 LITAFQ99732 161 aa9.72□□□□□ -0.85
FOXA3-202ENST00000594297 IGKV2-24A0A0C4DH68 120 aa9.71□□□□□ -0.86
FOXA3-202ENST00000594297 C2orf91Q6ZV80 131 aa9.71□□□□□ -0.86
FOXA3-202ENST00000594297 LINC00308Q8TCZ7 52 aa9.71□□□□□ -0.86
FOXA3-202ENST00000594297 XAGE1AQ9HD64 81 aa9.71□□□□□ -0.86
FOXA3-202ENST00000594297 HSD52Q0P140 79 aa9.7□□□□□ -0.86
FOXA3-202ENST00000594297 PPDPFQ9H3Y8 114 aa9.7□□□□□ -0.86
FOXA3-202ENST00000594297 TP73-AS1Q9UF72 201 aa9.7□□□□□ -0.86
FOXA3-202ENST00000594297 A0A096LNI7 61 aa9.69□□□□□ -0.86
FOXA3-202ENST00000594297 TMEM238LA0A1B0GVL6 79 aa9.69□□□□□ -0.86
FOXA3-202ENST00000594297 A6NJY4 79 aa9.69□□□□□ -0.86
FOXA3-202ENST00000594297 NPC2P61916 151 aa9.69□□□□□ -0.86
FOXA3-202ENST00000594297 MUSTN1Q8IVN3 82 aa9.69□□□□□ -0.86
FOXA3-202ENST00000594297 LOC107984156A0A0G2JMH3 177 aa9.68□□□□□ -0.86
FOXA3-202ENST00000594297 ARL17AQ8IVW1 177 aa9.68□□□□□ -0.86
FOXA3-202ENST00000594297 DDTP30046 118 aa9.67□□□□□ -0.86
FOXA3-202ENST00000594297 NKAPP1Q8N9T2 125 aa9.67□□□□□ -0.86
FOXA3-202ENST00000594297 M0R143 59 aa9.66□□□□□ -0.86
FOXA3-202ENST00000594297 NDUFC2O95298 119 aa9.66□□□□□ -0.86
FOXA3-202ENST00000594297 CEND1Q8N111 149 aa9.66□□□□□ -0.86
FOXA3-202ENST00000594297 CTAG1AP78358 180 aa9.65□□□□□ -0.86
FOXA3-202ENST00000594297 C9orf129Q5T035 196 aaKnown RBP9.65□□□□□ -0.86
FOXA3-202ENST00000594297 SPACA4Q8TDM5 124 aa9.64□□□□□ -0.87
FOXA3-202ENST00000594297 CHTF8P0CG12 524 aa9.63□□□□□ -0.87
FOXA3-202ENST00000594297 LBHQ53QV2 105 aaPredicted RBP9.63□□□□□ -0.87
FOXA3-202ENST00000594297 SOSTDC1Q6X4U4 206 aa9.62□□□□□ -0.87
FOXA3-202ENST00000594297 FAM19A5Q7Z5A7 132 aaPredicted RBP9.62□□□□□ -0.87
FOXA3-202ENST00000594297 CBY1Q9Y3M2 126 aa9.62□□□□□ -0.87
FOXA3-202ENST00000594297 TRBV10-2A0A0K0K1G8 114 aa9.61□□□□□ -0.87
FOXA3-202ENST00000594297 A4D1N5 150 aa9.61□□□□□ -0.87
FOXA3-202ENST00000594297 PCP4L1A6NKN8 68 aa9.61□□□□□ -0.87
FOXA3-202ENST00000594297 LINC01600Q96MT4 127 aa9.61□□□□□ -0.87
FOXA3-202ENST00000594297 TRAV13-2A0A0B4J235 113 aa9.6□□□□□ -0.87
FOXA3-202ENST00000594297 M0R378 163 aa9.6□□□□□ -0.87
FOXA3-202ENST00000594297 S100A7L2Q5SY68 101 aa9.6□□□□□ -0.87
FOXA3-202ENST00000594297 RAB37Q96AX2 223 aa9.6□□□□□ -0.87
FOXA3-202ENST00000594297 IGLV5-37A0A075B6J1 123 aa9.59□□□□□ -0.87
FOXA3-202ENST00000594297 A0A087WYN8 130 aa9.59□□□□□ -0.87
FOXA3-202ENST00000594297 A6NDN8 102 aa9.59□□□□□ -0.87
FOXA3-202ENST00000594297 VPREB1P12018 145 aa9.59□□□□□ -0.87
FOXA3-202ENST00000594297 OR13C6PQ8NH95 151 aa9.59□□□□□ -0.87
FOXA3-202ENST00000594297 LPAP08519 4548 aa9.58□□□□□ -0.88
FOXA3-202ENST00000594297 FAM168BA1KXE4 195 aa9.58□□□□□ -0.88
FOXA3-202ENST00000594297 M0QXV9 152 aa9.58□□□□□ -0.88
FOXA3-202ENST00000594297 NCR3O14931 201 aa9.58□□□□□ -0.88
FOXA3-202ENST00000594297 HINT1P49773 126 aaPredicted RBP9.58□□□□□ -0.88
FOXA3-202ENST00000594297 PLAC8Q9NZF1 115 aa9.58□□□□□ -0.88
FOXA3-202ENST00000594297 C22orf24Q9Y442 160 aa9.58□□□□□ -0.88
FOXA3-202ENST00000594297 A0A1W2PNN7 141 aa9.57□□□□□ -0.88
FOXA3-202ENST00000594297 EIF4EBP3O60516 100 aaPredicted RBP9.57□□□□□ -0.88
FOXA3-202ENST00000594297 BVES-AS1Q5T3Y7 98 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms