RNA–Protein interactions for RNA: ENST00000594116.1

LTBP4-209, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-209ENST00000594116 GAGE2BQ13066 116 aa10.76□□□□□ -0.69
LTBP4-209ENST00000594116 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.76□□□□□ -0.69
LTBP4-209ENST00000594116 PANO1I0J062 215 aa10.75□□□□□ -0.69
LTBP4-209ENST00000594116 TIMM17BO60830 172 aa10.75□□□□□ -0.69
LTBP4-209ENST00000594116 CHTF8P0CG12 524 aa10.75□□□□□ -0.69
LTBP4-209ENST00000594116 BOD1L2Q8IYS8 172 aa10.75□□□□□ -0.69
LTBP4-209ENST00000594116 SPACA4Q8TDM5 124 aa10.75□□□□□ -0.69
LTBP4-209ENST00000594116 IGKV2-24A0A0C4DH68 120 aa10.74□□□□□ -0.69
LTBP4-209ENST00000594116 LINC00158P58513 81 aa10.74□□□□□ -0.69
LTBP4-209ENST00000594116 RPL37AP61513 92 aaKnown RBP10.74□□□□□ -0.69
LTBP4-209ENST00000594116 GAGE2EQ4V326 116 aa10.74□□□□□ -0.69
LTBP4-209ENST00000594116 LINC00474Q9P2X8 69 aa10.74□□□□□ -0.69
LTBP4-209ENST00000594116 GAGE2DQ9UEU5 116 aa10.74□□□□□ -0.69
LTBP4-209ENST00000594116 DLEU1O43261 78 aa10.73□□□□□ -0.69
LTBP4-209ENST00000594116 LITAFQ99732 161 aa10.73□□□□□ -0.69
LTBP4-209ENST00000594116 A0A0U1RRA0 63 aa10.72□□□□□ -0.69
LTBP4-209ENST00000594116 S100A12P80511 92 aa10.72□□□□□ -0.69
LTBP4-209ENST00000594116 C9orf129Q5T035 196 aaKnown RBP10.72□□□□□ -0.69
LTBP4-209ENST00000594116 SERTAD4-AS1Q5TG53 156 aa10.72□□□□□ -0.69
LTBP4-209ENST00000594116 SND1-IT1Q9HBX3 110 aa10.72□□□□□ -0.69
LTBP4-209ENST00000594116 FAT3Q8TDW7 4589 aa10.71□□□□□ -0.69
LTBP4-209ENST00000594116 SCGB1D4Q6XE38 83 aa10.71□□□□□ -0.69
LTBP4-209ENST00000594116 MIR7-3HGQ8N6C7 128 aa10.71□□□□□ -0.69
LTBP4-209ENST00000594116 C14orf144Q96I85 54 aa10.71□□□□□ -0.69
LTBP4-209ENST00000594116 XAGE1AQ9HD64 81 aa10.71□□□□□ -0.69
LTBP4-209ENST00000594116 TP73-AS1Q9UF72 201 aa10.71□□□□□ -0.69
LTBP4-209ENST00000594116 PKHD1L1Q86WI1 4243 aa10.7□□□□□ -0.7
LTBP4-209ENST00000594116 ADAMTSL4-AS1Q5T5F5 129 aa10.7□□□□□ -0.7
LTBP4-209ENST00000594116 TMEM238C9JI98 176 aa10.68□□□□□ -0.7
LTBP4-209ENST00000594116 SLC25A34Q6PIV7 304 aa10.68□□□□□ -0.7
LTBP4-209ENST00000594116 DAND5Q8N907 189 aa10.68□□□□□ -0.7
LTBP4-209ENST00000594116 HMCN2Q8NDA2 5059 aa10.67□□□□□ -0.7
LTBP4-209ENST00000594116 A0A087WYN8 130 aa10.67□□□□□ -0.7
LTBP4-209ENST00000594116 LOC107984156A0A0G2JMH3 177 aa10.67□□□□□ -0.7
LTBP4-209ENST00000594116 HNRNPA3P51991 378 aaKnown RBP10.67□□□□□ -0.7
LTBP4-209ENST00000594116 ARL17AQ8IVW1 177 aa10.67□□□□□ -0.7
LTBP4-209ENST00000594116 SPANXDQ9BXN6 97 aa10.67□□□□□ -0.7
LTBP4-209ENST00000594116 SPANXCQ9NY87 97 aa10.67□□□□□ -0.7
LTBP4-209ENST00000594116 PLAC8Q9NZF1 115 aa10.67□□□□□ -0.7
LTBP4-209ENST00000594116 PLA2G2DQ9UNK4 145 aa10.67□□□□□ -0.7
LTBP4-209ENST00000594116 A0A1W2PNN7 141 aa10.66□□□□□ -0.7
LTBP4-209ENST00000594116 KRTAP7-1Q8IUC3 87 aa10.66□□□□□ -0.7
LTBP4-209ENST00000594116 SPANXB1Q9NS25 103 aaPredicted RBP10.66□□□□□ -0.7
LTBP4-209ENST00000594116 FAM168BA1KXE4 195 aa10.65□□□□□ -0.7
LTBP4-209ENST00000594116 SOSTDC1Q6X4U4 206 aa10.64□□□□□ -0.71
LTBP4-209ENST00000594116 C2orf91Q6ZV80 131 aa10.64□□□□□ -0.71
LTBP4-209ENST00000594116 Q6ZVH6 145 aa10.64□□□□□ -0.71
LTBP4-209ENST00000594116 C12orf57Q99622 126 aa10.64□□□□□ -0.71
LTBP4-209ENST00000594116 PPDPFQ9H3Y8 114 aa10.64□□□□□ -0.71
LTBP4-209ENST00000594116 HIGD1BQ9P298 99 aa10.64□□□□□ -0.71
LTBP4-209ENST00000594116 IGLV5-37A0A075B6J1 123 aa10.63□□□□□ -0.71
LTBP4-209ENST00000594116 Q8NDZ9 215 aa10.63□□□□□ -0.71
LTBP4-209ENST00000594116 LINC00308Q8TCZ7 52 aa10.63□□□□□ -0.71
LTBP4-209ENST00000594116 DPH3Q96FX2 82 aa10.63□□□□□ -0.71
LTBP4-209ENST00000594116 EIF4EBP3O60516 100 aaPredicted RBP10.62□□□□□ -0.71
LTBP4-209ENST00000594116 VPREB1P12018 145 aa10.62□□□□□ -0.71
LTBP4-209ENST00000594116 FAM19A5Q7Z5A7 132 aaPredicted RBP10.62□□□□□ -0.71
LTBP4-209ENST00000594116 LINC00518Q8N0U6 118 aa10.62□□□□□ -0.71
LTBP4-209ENST00000594116 UQCR10Q9UDW1 63 aa10.62□□□□□ -0.71
LTBP4-209ENST00000594116 IFITM1P13164 125 aa10.61□□□□□ -0.71
LTBP4-209ENST00000594116 MIEN1Q9BRT3 115 aa10.61□□□□□ -0.71
LTBP4-209ENST00000594116 NPC2P61916 151 aa10.6□□□□□ -0.71
LTBP4-209ENST00000594116 RPL24P83731 157 aaKnown RBP10.6□□□□□ -0.71
LTBP4-209ENST00000594116 NDUFC2O95298 119 aa10.59□□□□□ -0.71
LTBP4-209ENST00000594116 M0QXV9 152 aa10.58□□□□□ -0.72
LTBP4-209ENST00000594116 SRSF9Q13242 221 aaKnown RBP eCLIP10.58□□□□□ -0.72
LTBP4-209ENST00000594116 COPS9Q8WXC6 57 aa10.58□□□□□ -0.72
LTBP4-209ENST00000594116 PRO1933Q9H354 126 aa10.58□□□□□ -0.72
LTBP4-209ENST00000594116 C22orf24Q9Y442 160 aa10.58□□□□□ -0.72
LTBP4-209ENST00000594116 MUSTN1Q8IVN3 82 aa10.57□□□□□ -0.72
LTBP4-209ENST00000594116 MT1HL1P0DM35 61 aa10.56□□□□□ -0.72
LTBP4-209ENST00000594116 PHF5AQ7RTV0 110 aaKnown RBP10.56□□□□□ -0.72
LTBP4-209ENST00000594116 NKAPP1Q8N9T2 125 aa10.56□□□□□ -0.72
LTBP4-209ENST00000594116 TAL2Q16559 108 aa10.55□□□□□ -0.72
LTBP4-209ENST00000594116 MRPL55Q7Z7F7 128 aaKnown RBP10.55□□□□□ -0.72
LTBP4-209ENST00000594116 HIST1H4GQ99525 98 aa10.55□□□□□ -0.72
LTBP4-209ENST00000594116 TRBV10-2A0A0K0K1G8 114 aa10.54□□□□□ -0.72
LTBP4-209ENST00000594116 C7orf33Q8WU49 177 aa10.54□□□□□ -0.72
LTBP4-209ENST00000594116 M0R378 163 aa10.53□□□□□ -0.72
LTBP4-209ENST00000594116 PRR3P79522 188 aaKnown RBP10.53□□□□□ -0.72
LTBP4-209ENST00000594116 LBHQ53QV2 105 aaPredicted RBP10.53□□□□□ -0.72
LTBP4-209ENST00000594116 UBR4Q5T4S7 5183 aa10.52□□□□□ -0.72
LTBP4-209ENST00000594116 TSTD3H0UI37 97 aa10.52□□□□□ -0.73
LTBP4-209ENST00000594116 NCR3O14931 201 aa10.52□□□□□ -0.73
LTBP4-209ENST00000594116 LINC00167Q96N53 147 aa10.52□□□□□ -0.73
LTBP4-209ENST00000594116 IGKV2-28A0A075B6P5 120 aa10.51□□□□□ -0.73
LTBP4-209ENST00000594116 IGKV2D-28P01615 120 aa10.51□□□□□ -0.73
LTBP4-209ENST00000594116 HSD52Q0P140 79 aa10.5□□□□□ -0.73
LTBP4-209ENST00000594116 KRTAP11-1Q8IUC1 163 aa10.5□□□□□ -0.73
LTBP4-209ENST00000594116 A4D1N5 150 aa10.49□□□□□ -0.73
LTBP4-209ENST00000594116 CEND1Q8N111 149 aa10.49□□□□□ -0.73
LTBP4-209ENST00000594116 IGLV1-50A0A075B6I6 118 aa10.48□□□□□ -0.73
LTBP4-209ENST00000594116 GAGE10A6NGK3 116 aa10.48□□□□□ -0.73
LTBP4-209ENST00000594116 UBE2BP63146 152 aa10.48□□□□□ -0.73
LTBP4-209ENST00000594116 RPL37AP8A6NKH3 93 aa10.46□□□□□ -0.73
LTBP4-209ENST00000594116 IGLV6-57P01721 117 aa10.46□□□□□ -0.73
LTBP4-209ENST00000594116 LINC00337Q8N6G1 96 aa10.46□□□□□ -0.73
LTBP4-209ENST00000594116 TRBV10-3A0A0K0K1G6 114 aa10.45□□□□□ -0.74
LTBP4-209ENST00000594116 DDTP30046 118 aa10.44□□□□□ -0.74
LTBP4-209ENST00000594116 FXYD2P54710 66 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms