RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 IGKV2D-26A0A0A0MRZ7 120 aa9.29□□□□□ -0.92
DDX39A-221ENST00000593026 INAFM2P0DMQ5 153 aa9.29□□□□□ -0.92
DDX39A-221ENST00000593026 UBE2BP63146 152 aa9.29□□□□□ -0.92
DDX39A-221ENST00000593026 PRR3P79522 188 aaKnown RBP9.29□□□□□ -0.92
DDX39A-221ENST00000593026 MIR7-3HGQ8N6C7 128 aa9.29□□□□□ -0.92
DDX39A-221ENST00000593026 C22orf24Q9Y442 160 aa9.29□□□□□ -0.92
DDX39A-221ENST00000593026 TP73-AS1Q9UF72 201 aa9.28□□□□□ -0.92
DDX39A-221ENST00000593026 TMA7Q9Y2S6 64 aaKnown RBP9.28□□□□□ -0.92
DDX39A-221ENST00000593026 SRRM2Q9UQ35 2752 aaKnown RBP9.28□□□□□ -0.92
DDX39A-221ENST00000593026 VPS13BQ7Z7G8 4022 aa9.28□□□□□ -0.92
DDX39A-221ENST00000593026 A0A0J9YXY3 114 aa9.27□□□□□ -0.93
DDX39A-221ENST00000593026 ZNF815PA8K554 130 aa9.27□□□□□ -0.93
DDX39A-221ENST00000593026 LBHQ53QV2 105 aaPredicted RBP9.27□□□□□ -0.93
DDX39A-221ENST00000593026 ANKRD39Q53RE8 183 aa9.27□□□□□ -0.93
DDX39A-221ENST00000593026 NKAPP1Q8N9T2 125 aa9.27□□□□□ -0.93
DDX39A-221ENST00000593026 IGLV5-37A0A075B6J1 123 aa9.26□□□□□ -0.93
DDX39A-221ENST00000593026 SCGB1D1O95968 90 aa9.26□□□□□ -0.93
DDX39A-221ENST00000593026 RPL24P83731 157 aaKnown RBP9.26□□□□□ -0.93
DDX39A-221ENST00000593026 MRPL55Q7Z7F7 128 aaKnown RBP9.26□□□□□ -0.93
DDX39A-221ENST00000593026 KRTAP11-1Q8IUC1 163 aa9.25□□□□□ -0.93
DDX39A-221ENST00000593026 DAND5Q8N907 189 aa9.25□□□□□ -0.93
DDX39A-221ENST00000593026 TTTY13Q9BZ97 58 aa9.25□□□□□ -0.93
DDX39A-221ENST00000593026 PSORS1C2Q9UIG4 136 aa9.25□□□□□ -0.93
DDX39A-221ENST00000593026 HSBP1L1C9JCN9 74 aa9.24□□□□□ -0.93
DDX39A-221ENST00000593026 VPREB1P12018 145 aa9.24□□□□□ -0.93
DDX39A-221ENST00000593026 GAGE10A6NGK3 116 aa9.23□□□□□ -0.93
DDX39A-221ENST00000593026 BOD1L2Q8IYS8 172 aa9.23□□□□□ -0.93
DDX39A-221ENST00000593026 HNRNPA3P51991 378 aaKnown RBP9.22□□□□□ -0.93
DDX39A-221ENST00000593026 C1orf137Q5JT78 98 aa9.22□□□□□ -0.93
DDX39A-221ENST00000593026 Q8NDZ9 215 aa9.22□□□□□ -0.93
DDX39A-221ENST00000593026 LINC00167Q96N53 147 aa9.22□□□□□ -0.93
DDX39A-221ENST00000593026 MIEN1Q9BRT3 115 aa9.22□□□□□ -0.93
DDX39A-221ENST00000593026 RPL37AP8A6NKH3 93 aa9.21□□□□□ -0.94
DDX39A-221ENST00000593026 TIMM17BO60830 172 aa9.21□□□□□ -0.94
DDX39A-221ENST00000593026 LOC107984156A0A0G2JMH3 177 aa9.2□□□□□ -0.94
DDX39A-221ENST00000593026 ADAMTSL4-AS1Q5T5F5 129 aa9.2□□□□□ -0.94
DDX39A-221ENST00000593026 SCGB1D4Q6XE38 83 aa9.2□□□□□ -0.94
DDX39A-221ENST00000593026 PCP2Q8IVA1 136 aa9.2□□□□□ -0.94
DDX39A-221ENST00000593026 ARL17AQ8IVW1 177 aa9.2□□□□□ -0.94
DDX39A-221ENST00000593026 LITAFQ99732 161 aa9.19□□□□□ -0.94
DDX39A-221ENST00000593026 IGKV2-28A0A075B6P5 120 aa9.18□□□□□ -0.94
DDX39A-221ENST00000593026 IGKV2D-28P01615 120 aa9.18□□□□□ -0.94
DDX39A-221ENST00000593026 NPC2P61916 151 aa9.18□□□□□ -0.94
DDX39A-221ENST00000593026 TMEM238C9JI98 176 aa9.17□□□□□ -0.94
DDX39A-221ENST00000593026 M0R378 163 aa9.17□□□□□ -0.94
DDX39A-221ENST00000593026 NCR3O14931 201 aa9.17□□□□□ -0.94
DDX39A-221ENST00000593026 IGLV7-43P04211 117 aa9.17□□□□□ -0.94
DDX39A-221ENST00000593026 JOSD1Q15040 202 aaPredicted RBP9.17□□□□□ -0.94
DDX39A-221ENST00000593026 IGLV1-50A0A075B6I6 118 aa9.16□□□□□ -0.94
DDX39A-221ENST00000593026 SPINK6Q6UWN8 80 aa9.16□□□□□ -0.94
DDX39A-221ENST00000593026 SOSTDC1Q6X4U4 206 aa9.16□□□□□ -0.94
DDX39A-221ENST00000593026 SRSF9Q13242 221 aaKnown RBP eCLIP9.15□□□□□ -0.94
DDX39A-221ENST00000593026 LINC00308Q8TCZ7 52 aa9.15□□□□□ -0.94
DDX39A-221ENST00000593026 FLG2Q5D862 2391 aaPredicted RBP9.15□□□□□ -0.95
DDX39A-221ENST00000593026 EIF4EBP3O60516 100 aaPredicted RBP9.14□□□□□ -0.95
DDX39A-221ENST00000593026 NDUFC2O95298 119 aa9.14□□□□□ -0.95
DDX39A-221ENST00000593026 SPANXB1Q9NS25 103 aaPredicted RBP9.14□□□□□ -0.95
DDX39A-221ENST00000593026 BCE1O60756 84 aa9.13□□□□□ -0.95
DDX39A-221ENST00000593026 SPANXDQ9BXN6 97 aa9.13□□□□□ -0.95
DDX39A-221ENST00000593026 SPANXCQ9NY87 97 aa9.13□□□□□ -0.95
DDX39A-221ENST00000593026 TRBV10-2A0A0K0K1G8 114 aa9.12□□□□□ -0.95
DDX39A-221ENST00000593026 CTAG1AP78358 180 aa9.12□□□□□ -0.95
DDX39A-221ENST00000593026 VAMP8Q9BV40 100 aa9.12□□□□□ -0.95
DDX39A-221ENST00000593026 PAM16Q9Y3D7 125 aa9.12□□□□□ -0.95
DDX39A-221ENST00000593026 REG3GQ6UW15 175 aa9.11□□□□□ -0.95
DDX39A-221ENST00000593026 Q6ZVH6 145 aa9.11□□□□□ -0.95
DDX39A-221ENST00000593026 COPS9Q8WXC6 57 aa9.11□□□□□ -0.95
DDX39A-221ENST00000593026 TMEM126AQ9H061 195 aa9.11□□□□□ -0.95
DDX39A-221ENST00000593026 COX8AP10176 69 aa9.1□□□□□ -0.95
DDX39A-221ENST00000593026 SPATA45Q537H7 98 aa9.1□□□□□ -0.95
DDX39A-221ENST00000593026 PYY3Q5JQD4 70 aa9.1□□□□□ -0.95
DDX39A-221ENST00000593026 DIRC1Q969H9 104 aa9.1□□□□□ -0.95
DDX39A-221ENST00000593026 PKHD1L1Q86WI1 4243 aa9.09□□□□□ -0.95
DDX39A-221ENST00000593026 TRBV10-3A0A0K0K1G6 114 aa9.09□□□□□ -0.95
DDX39A-221ENST00000593026 ZNF861PO60384 105 aa9.09□□□□□ -0.95
DDX39A-221ENST00000593026 IFITM1P13164 125 aa9.09□□□□□ -0.95
DDX39A-221ENST00000593026 DDTP30046 118 aa9.09□□□□□ -0.95
DDX39A-221ENST00000593026 RPL28P46779 137 aaKnown RBP9.09□□□□□ -0.95
DDX39A-221ENST00000593026 S100A12P80511 92 aa9.09□□□□□ -0.95
DDX39A-221ENST00000593026 S100A7L2Q5SY68 101 aa9.09□□□□□ -0.95
DDX39A-221ENST00000593026 MYCBP2O75592 4640 aa9.09□□□□□ -0.95
DDX39A-221ENST00000593026 KRTAP29-1A8MX34 341 aaPredicted RBP9.08□□□□□ -0.96
DDX39A-221ENST00000593026 PRYO14603 147 aa9.08□□□□□ -0.96
DDX39A-221ENST00000593026 UBE2AP49459 152 aa9.08□□□□□ -0.96
DDX39A-221ENST00000593026 HERC1Q15751 4861 aa9.07□□□□□ -0.96
DDX39A-221ENST00000593026 H0Y9J4 135 aa9.07□□□□□ -0.96
DDX39A-221ENST00000593026 OXTP01178 125 aa9.07□□□□□ -0.96
DDX39A-221ENST00000593026 FAM19A1Q7Z5A9 133 aa9.07□□□□□ -0.96
DDX39A-221ENST00000593026 C14orf144Q96I85 54 aa9.07□□□□□ -0.96
DDX39A-221ENST00000593026 PPDPFQ9H3Y8 114 aa9.07□□□□□ -0.96
DDX39A-221ENST00000593026 KCNQ1DNQ9H478 68 aa9.07□□□□□ -0.96
DDX39A-221ENST00000593026 J3QL48 77 aa9.06□□□□□ -0.96
DDX39A-221ENST00000593026 DLEU1O43261 78 aa9.06□□□□□ -0.96
DDX39A-221ENST00000593026 MUSTN1Q8IVN3 82 aa9.06□□□□□ -0.96
DDX39A-221ENST00000593026 IGLV6-57P01721 117 aa9.05□□□□□ -0.96
DDX39A-221ENST00000593026 PRLHP81277 87 aa9.05□□□□□ -0.96
DDX39A-221ENST00000593026 LINC00518Q8N0U6 118 aa9.05□□□□□ -0.96
DDX39A-221ENST00000593026 KRTAP13-1Q8IUC0 172 aa9.04□□□□□ -0.96
DDX39A-221ENST00000593026 OR13C6PQ8NH95 151 aa9.04□□□□□ -0.96
DDX39A-221ENST00000593026 DMBT1Q9UGM3 2413 aaPredicted RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms