RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 IGKV2D-26A0A0A0MRZ7 120 aa9.46□□□□□ -0.9
TRIM47-206ENST00000592942 J3QQQ9 107 aa9.46□□□□□ -0.9
TRIM47-206ENST00000592942 SERTAD4-AS1Q5TG53 156 aa9.46□□□□□ -0.9
TRIM47-206ENST00000592942 FAM19A5Q7Z5A7 132 aaPredicted RBP9.46□□□□□ -0.9
TRIM47-206ENST00000592942 KRTAP29-1A8MX34 341 aaPredicted RBP9.45□□□□□ -0.9
TRIM47-206ENST00000592942 TSPEAR-AS2P59090 65 aa9.45□□□□□ -0.9
TRIM47-206ENST00000592942 S100A12P80511 92 aa9.45□□□□□ -0.9
TRIM47-206ENST00000592942 SRSF9Q13242 221 aaKnown RBP eCLIP9.45□□□□□ -0.9
TRIM47-206ENST00000592942 SPATA45Q537H7 98 aa9.45□□□□□ -0.9
TRIM47-206ENST00000592942 PSORS1C2Q9UIG4 136 aa9.45□□□□□ -0.9
TRIM47-206ENST00000592942 PAM16Q9Y3D7 125 aa9.45□□□□□ -0.9
TRIM47-206ENST00000592942 LGALS3P17931 250 aaKnown RBP9.44□□□□□ -0.9
TRIM47-206ENST00000592942 NMUP48645 174 aa9.44□□□□□ -0.9
TRIM47-206ENST00000592942 SFTA2Q6UW10 78 aa9.44□□□□□ -0.9
TRIM47-206ENST00000592942 C22orf24Q9Y442 160 aa9.43□□□□□ -0.9
TRIM47-206ENST00000592942 M0QXV9 152 aa9.42□□□□□ -0.9
TRIM47-206ENST00000592942 PFN2P35080 140 aa9.42□□□□□ -0.9
TRIM47-206ENST00000592942 NDUFA12Q9UI09 145 aa9.42□□□□□ -0.9
TRIM47-206ENST00000592942 MYMXA0A1B0GTQ4 84 aa9.41□□□□□ -0.9
TRIM47-206ENST00000592942 LINC00518Q8N0U6 118 aa9.41□□□□□ -0.9
TRIM47-206ENST00000592942 C12orf57Q99622 126 aa9.41□□□□□ -0.9
TRIM47-206ENST00000592942 ERG28Q9UKR5 140 aa9.41□□□□□ -0.9
TRIM47-206ENST00000592942 PLA2G2DQ9UNK4 145 aa9.41□□□□□ -0.9
TRIM47-206ENST00000592942 COX8AP10176 69 aa9.4□□□□□ -0.9
TRIM47-206ENST00000592942 HERV-K104P63124 156 aa9.4□□□□□ -0.9
TRIM47-206ENST00000592942 COX17Q14061 63 aa9.4□□□□□ -0.9
TRIM47-206ENST00000592942 PCP2Q8IVA1 136 aa9.4□□□□□ -0.9
TRIM47-206ENST00000592942 ZNF815PA8K554 130 aa9.39□□□□□ -0.91
TRIM47-206ENST00000592942 DLEU1O43261 78 aa9.39□□□□□ -0.91
TRIM47-206ENST00000592942 OXTP01178 125 aa9.39□□□□□ -0.91
TRIM47-206ENST00000592942 BOD1L2Q8IYS8 172 aa9.39□□□□□ -0.91
TRIM47-206ENST00000592942 TTTY13Q9BZ97 58 aa9.39□□□□□ -0.91
TRIM47-206ENST00000592942 SND1-IT1Q9HBX3 110 aa9.39□□□□□ -0.91
TRIM47-206ENST00000592942 IGLV5-37A0A075B6J1 123 aa9.38□□□□□ -0.91
TRIM47-206ENST00000592942 TP73-AS1Q9UF72 201 aa9.38□□□□□ -0.91
TRIM47-206ENST00000592942 TNXBP22105 4242 aa9.37□□□□□ -0.91
TRIM47-206ENST00000592942 C1orf137Q5JT78 98 aa9.37□□□□□ -0.91
TRIM47-206ENST00000592942 SPINK6Q6UWN8 80 aa9.37□□□□□ -0.91
TRIM47-206ENST00000592942 Q8NDZ9 215 aa9.37□□□□□ -0.91
TRIM47-206ENST00000592942 C14orf144Q96I85 54 aa9.37□□□□□ -0.91
TRIM47-206ENST00000592942 SLC25A34Q6PIV7 304 aa9.36□□□□□ -0.91
TRIM47-206ENST00000592942 A0A0J9YXY3 114 aa9.35□□□□□ -0.91
TRIM47-206ENST00000592942 LINC00587B1AMM8 73 aa9.35□□□□□ -0.91
TRIM47-206ENST00000592942 IGLV7-43P04211 117 aa9.35□□□□□ -0.91
TRIM47-206ENST00000592942 MT1HL1P0DM35 61 aa9.35□□□□□ -0.91
TRIM47-206ENST00000592942 MRPL55Q7Z7F7 128 aaKnown RBP9.35□□□□□ -0.91
TRIM47-206ENST00000592942 LINC00167Q96N53 147 aa9.35□□□□□ -0.91
TRIM47-206ENST00000592942 A0A0U1RRA0 63 aa9.34□□□□□ -0.91
TRIM47-206ENST00000592942 SMIM13P0DJ93 91 aa9.34□□□□□ -0.91
TRIM47-206ENST00000592942 VPREB1P12018 145 aa9.34□□□□□ -0.91
TRIM47-206ENST00000592942 LINC00158P58513 81 aa9.34□□□□□ -0.91
TRIM47-206ENST00000592942 UBE2BP63146 152 aa9.34□□□□□ -0.91
TRIM47-206ENST00000592942 LBHQ53QV2 105 aaPredicted RBP9.34□□□□□ -0.91
TRIM47-206ENST00000592942 UBR4Q5T4S7 5183 aa9.33□□□□□ -0.92
TRIM47-206ENST00000592942 J3QL48 77 aa9.33□□□□□ -0.92
TRIM47-206ENST00000592942 TIMM17BO60830 172 aa9.33□□□□□ -0.92
TRIM47-206ENST00000592942 MEIG1Q5JSS6 88 aa9.33□□□□□ -0.92
TRIM47-206ENST00000592942 UQCR10Q9UDW1 63 aa9.33□□□□□ -0.92
TRIM47-206ENST00000592942 SCGB1D4Q6XE38 83 aa9.32□□□□□ -0.92
TRIM47-206ENST00000592942 RPL37AP8A6NKH3 93 aa9.31□□□□□ -0.92
TRIM47-206ENST00000592942 GAGE10A6NGK3 116 aa9.3□□□□□ -0.92
TRIM47-206ENST00000592942 MIR7-3HGQ8N6C7 128 aa9.3□□□□□ -0.92
TRIM47-206ENST00000592942 LINC01600Q96MT4 127 aa9.3□□□□□ -0.92
TRIM47-206ENST00000592942 LITAFQ99732 161 aa9.3□□□□□ -0.92
TRIM47-206ENST00000592942 PRO1933Q9H354 126 aa9.3□□□□□ -0.92
TRIM47-206ENST00000592942 HIGD1BQ9P298 99 aa9.3□□□□□ -0.92
TRIM47-206ENST00000592942 C2orf91Q6ZV80 131 aa9.29□□□□□ -0.92
TRIM47-206ENST00000592942 MIEN1Q9BRT3 115 aa9.29□□□□□ -0.92
TRIM47-206ENST00000592942 TMEM238C9JI98 176 aa9.28□□□□□ -0.92
TRIM47-206ENST00000592942 TSTD3H0UI37 97 aa9.28□□□□□ -0.92
TRIM47-206ENST00000592942 RPL24P83731 157 aaKnown RBP9.28□□□□□ -0.92
TRIM47-206ENST00000592942 NKAPP1Q8N9T2 125 aa9.28□□□□□ -0.92
TRIM47-206ENST00000592942 SPANXB1Q9NS25 103 aaPredicted RBP9.28□□□□□ -0.92
TRIM47-206ENST00000592942 IGLV1-50A0A075B6I6 118 aa9.27□□□□□ -0.93
TRIM47-206ENST00000592942 LOC107984156A0A0G2JMH3 177 aa9.27□□□□□ -0.93
TRIM47-206ENST00000592942 ADAMTSL4-AS1Q5T5F5 129 aa9.27□□□□□ -0.93
TRIM47-206ENST00000592942 Q6ZVH6 145 aa9.27□□□□□ -0.93
TRIM47-206ENST00000592942 ARL17AQ8IVW1 177 aa9.27□□□□□ -0.93
TRIM47-206ENST00000592942 SPANXDQ9BXN6 97 aa9.27□□□□□ -0.93
TRIM47-206ENST00000592942 SPANXCQ9NY87 97 aa9.27□□□□□ -0.93
TRIM47-206ENST00000592942 KRTAP10-8P60410 259 aa9.26□□□□□ -0.93
TRIM47-206ENST00000592942 DAND5Q8N907 189 aa9.26□□□□□ -0.93
TRIM47-206ENST00000592942 ZNF861PO60384 105 aa9.25□□□□□ -0.93
TRIM47-206ENST00000592942 BCE1O60756 84 aa9.25□□□□□ -0.93
TRIM47-206ENST00000592942 REG3GQ6UW15 175 aa9.25□□□□□ -0.93
TRIM47-206ENST00000592942 IGKV2-28A0A075B6P5 120 aa9.24□□□□□ -0.93
TRIM47-206ENST00000592942 H0Y9J4 135 aa9.24□□□□□ -0.93
TRIM47-206ENST00000592942 IGKV2D-28P01615 120 aa9.24□□□□□ -0.93
TRIM47-206ENST00000592942 DIRC1Q969H9 104 aa9.24□□□□□ -0.93
TRIM47-206ENST00000592942 PPDPFQ9H3Y8 114 aa9.24□□□□□ -0.93
TRIM47-206ENST00000592942 HMCN2Q8NDA2 5059 aa9.24□□□□□ -0.93
TRIM47-206ENST00000592942 EIF4EBP3O60516 100 aaPredicted RBP9.23□□□□□ -0.93
TRIM47-206ENST00000592942 IFITM1P13164 125 aa9.23□□□□□ -0.93
TRIM47-206ENST00000592942 TAL2Q16559 108 aa9.23□□□□□ -0.93
TRIM47-206ENST00000592942 KRTAP13-1Q8IUC0 172 aa9.23□□□□□ -0.93
TRIM47-206ENST00000592942 M0R378 163 aa9.22□□□□□ -0.93
TRIM47-206ENST00000592942 KRTAP1-4P0C5Y4 121 aa9.22□□□□□ -0.93
TRIM47-206ENST00000592942 LINC00308Q8TCZ7 52 aa9.22□□□□□ -0.93
TRIM47-206ENST00000592942 SOSTDC1Q6X4U4 206 aa9.21□□□□□ -0.94
TRIM47-206ENST00000592942 COPS9Q8WXC6 57 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 140.6 ms