RNA–Protein interactions for RNA: ENST00000592395.5

TCF3-216, Transcript of transcription factor 3, humanhuman

TSL 5

Gene TCF3, Length 996 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-216ENST00000592395 HERVK_113P61574 105 aa11.49□□□□□ -0.57
TCF3-216ENST00000592395 UBE2BP63146 152 aa11.49□□□□□ -0.57
TCF3-216ENST00000592395 TP73-AS1Q9UF72 201 aa11.49□□□□□ -0.57
TCF3-216ENST00000592395 LEPROTO15243 131 aa11.48□□□□□ -0.57
TCF3-216ENST00000592395 C1orf137Q5JT78 98 aa11.48□□□□□ -0.57
TCF3-216ENST00000592395 PLEKHB2Q96CS7 222 aa11.48□□□□□ -0.57
TCF3-216ENST00000592395 NDUFA12Q9UI09 145 aa11.48□□□□□ -0.57
TCF3-216ENST00000592395 HERV-K104P63124 156 aa11.47□□□□□ -0.57
TCF3-216ENST00000592395 LBHQ53QV2 105 aaPredicted RBP11.47□□□□□ -0.57
TCF3-216ENST00000592395 SPINK6Q6UWN8 80 aa11.47□□□□□ -0.57
TCF3-216ENST00000592395 PET117Q6UWS5 81 aa11.47□□□□□ -0.57
TCF3-216ENST00000592395 KRTAP11-1Q8IUC1 163 aa11.47□□□□□ -0.57
TCF3-216ENST00000592395 SND1-IT1Q9HBX3 110 aa11.47□□□□□ -0.57
TCF3-216ENST00000592395 LINC01545Q5VT33 79 aa11.46□□□□□ -0.57
TCF3-216ENST00000592395 MRPL55Q7Z7F7 128 aaKnown RBP11.46□□□□□ -0.57
TCF3-216ENST00000592395 IGLV5-37A0A075B6J1 123 aa11.45□□□□□ -0.58
TCF3-216ENST00000592395 MYMXA0A1B0GTQ4 84 aa11.45□□□□□ -0.58
TCF3-216ENST00000592395 LINC00158P58513 81 aa11.45□□□□□ -0.58
TCF3-216ENST00000592395 TSPEAR-AS2P59090 65 aa11.45□□□□□ -0.58
TCF3-216ENST00000592395 SRSF9Q13242 221 aaKnown RBP eCLIP11.45□□□□□ -0.58
TCF3-216ENST00000592395 J3QQQ9 107 aa11.44□□□□□ -0.58
TCF3-216ENST00000592395 C3orf79P0CE67 100 aa11.44□□□□□ -0.58
TCF3-216ENST00000592395 LINC00587B1AMM8 73 aa11.43□□□□□ -0.58
TCF3-216ENST00000592395 MEIG1Q5JSS6 88 aa11.43□□□□□ -0.58
TCF3-216ENST00000592395 NKAPP1Q8N9T2 125 aa11.43□□□□□ -0.58
TCF3-216ENST00000592395 IGLV7-43P04211 117 aa11.42□□□□□ -0.58
TCF3-216ENST00000592395 NMUP48645 174 aa11.42□□□□□ -0.58
TCF3-216ENST00000592395 DMBT1Q9UGM3 2413 aaPredicted RBP11.42□□□□□ -0.58
TCF3-216ENST00000592395 A0A0U1RRA0 63 aa11.41□□□□□ -0.58
TCF3-216ENST00000592395 E9PLD3 99 aa11.41□□□□□ -0.58
TCF3-216ENST00000592395 SMIM13P0DJ93 91 aa11.41□□□□□ -0.58
TCF3-216ENST00000592395 LGALS3P17931 250 aaKnown RBP11.41□□□□□ -0.58
TCF3-216ENST00000592395 KRTDAPP60985 99 aa11.41□□□□□ -0.58
TCF3-216ENST00000592395 LRP1Q07954 4544 aaKnown RBP11.41□□□□□ -0.58
TCF3-216ENST00000592395 VPREB1P12018 145 aa11.4□□□□□ -0.58
TCF3-216ENST00000592395 RPL24P83731 157 aaKnown RBP11.4□□□□□ -0.58
TCF3-216ENST00000592395 LINC00167Q96N53 147 aa11.4□□□□□ -0.58
TCF3-216ENST00000592395 FAT3Q8TDW7 4589 aa11.4□□□□□ -0.58
TCF3-216ENST00000592395 XP32Q5T750 250 aa11.39□□□□□ -0.59
TCF3-216ENST00000592395 REG3GQ6UW15 175 aa11.38□□□□□ -0.59
TCF3-216ENST00000592395 C20orf202A1L168 122 aa11.37□□□□□ -0.59
TCF3-216ENST00000592395 GAGE10A6NGK3 116 aa11.37□□□□□ -0.59
TCF3-216ENST00000592395 RPL37AP8A6NKH3 93 aa11.37□□□□□ -0.59
TCF3-216ENST00000592395 MIR7-3HGQ8N6C7 128 aa11.37□□□□□ -0.59
TCF3-216ENST00000592395 HIST3H2BBQ8N257 126 aa11.35□□□□□ -0.59
TCF3-216ENST00000592395 Q8NDZ9 215 aa11.35□□□□□ -0.59
TCF3-216ENST00000592395 DIRC1Q969H9 104 aa11.35□□□□□ -0.59
TCF3-216ENST00000592395 S100A6P06703 90 aa11.34□□□□□ -0.59
TCF3-216ENST00000592395 S100A2P29034 98 aa11.34□□□□□ -0.59
TCF3-216ENST00000592395 LINC01600Q96MT4 127 aa11.33□□□□□ -0.6
TCF3-216ENST00000592395 BCE1O60756 84 aa11.32□□□□□ -0.6
TCF3-216ENST00000592395 AKR1D1P51857 326 aa11.32□□□□□ -0.6
TCF3-216ENST00000592395 BOD1L2Q8IYS8 172 aa11.32□□□□□ -0.6
TCF3-216ENST00000592395 HIST1H2BLQ99880 126 aa11.32□□□□□ -0.6
TCF3-216ENST00000592395 IGLV1-50A0A075B6I6 118 aa11.31□□□□□ -0.6
TCF3-216ENST00000592395 IGKV2-28A0A075B6P5 120 aa11.31□□□□□ -0.6
TCF3-216ENST00000592395 A0A0J9YXY3 114 aa11.31□□□□□ -0.6
TCF3-216ENST00000592395 H0Y9J4 135 aa11.31□□□□□ -0.6
TCF3-216ENST00000592395 IGKV2D-28P01615 120 aa11.31□□□□□ -0.6
TCF3-216ENST00000592395 MT1HL1P0DM35 61 aa11.31□□□□□ -0.6
TCF3-216ENST00000592395 ZNF861PO60384 105 aa11.3□□□□□ -0.6
TCF3-216ENST00000592395 DAND5Q8N907 189 aa11.3□□□□□ -0.6
TCF3-216ENST00000592395 IGKV2D-26A0A0A0MRZ7 120 aa11.29□□□□□ -0.6
TCF3-216ENST00000592395 LOC107984156A0A0G2JMH3 177 aa11.29□□□□□ -0.6
TCF3-216ENST00000592395 M0R378 163 aa11.29□□□□□ -0.6
TCF3-216ENST00000592395 ARL17AQ8IVW1 177 aa11.29□□□□□ -0.6
TCF3-216ENST00000592395 HERC1Q15751 4861 aa11.28□□□□□ -0.6
TCF3-216ENST00000592395 RPL28P46779 137 aaKnown RBP11.28□□□□□ -0.6
TCF3-216ENST00000592395 MIEN1Q9BRT3 115 aa11.27□□□□□ -0.61
TCF3-216ENST00000592395 ZNF815PA8K554 130 aa11.26□□□□□ -0.61
TCF3-216ENST00000592395 SNRPEP62304 92 aaKnown RBP11.26□□□□□ -0.61
TCF3-216ENST00000592395 ATOH7Q8N100 152 aa11.26□□□□□ -0.61
TCF3-216ENST00000592395 NCR3O14931 201 aa11.25□□□□□ -0.61
TCF3-216ENST00000592395 TMEM126AQ9H061 195 aa11.25□□□□□ -0.61
TCF3-216ENST00000592395 TMEM238C9JI98 176 aa11.24□□□□□ -0.61
TCF3-216ENST00000592395 TIMM17BO60830 172 aa11.24□□□□□ -0.61
TCF3-216ENST00000592395 UBE2AP49459 152 aa11.24□□□□□ -0.61
TCF3-216ENST00000592395 ADAMTSL4-AS1Q5T5F5 129 aa11.24□□□□□ -0.61
TCF3-216ENST00000592395 KRTAP13-1Q8IUC0 172 aa11.23□□□□□ -0.61
TCF3-216ENST00000592395 TTTY13Q9BZ97 58 aa11.23□□□□□ -0.61
TCF3-216ENST00000592395 C5orf52A6NGY3 159 aa11.22□□□□□ -0.61
TCF3-216ENST00000592395 LITAFQ99732 161 aa11.22□□□□□ -0.61
TCF3-216ENST00000592395 TRBV10-2A0A0K0K1G8 114 aa11.21□□□□□ -0.61
TCF3-216ENST00000592395 NDUFC2O95298 119 aa11.21□□□□□ -0.61
TCF3-216ENST00000592395 KRTAP10-8P60410 259 aa11.21□□□□□ -0.61
TCF3-216ENST00000592395 SOSTDC1Q6X4U4 206 aa11.21□□□□□ -0.61
TCF3-216ENST00000592395 FAM19A1Q7Z5A9 133 aa11.21□□□□□ -0.61
TCF3-216ENST00000592395 LOC100996750A0A140TA64 210 aa11.2□□□□□ -0.62
TCF3-216ENST00000592395 KRTAP1-4P0C5Y4 121 aa11.2□□□□□ -0.62
TCF3-216ENST00000592395 NPC2P61916 151 aa11.2□□□□□ -0.62
TCF3-216ENST00000592395 KRTAP4-6Q9BYQ5 205 aa11.2□□□□□ -0.62
TCF3-216ENST00000592395 SPANXB1Q9NS25 103 aaPredicted RBP11.2□□□□□ -0.62
TCF3-216ENST00000592395 PRYO14603 147 aa11.19□□□□□ -0.62
TCF3-216ENST00000592395 TRBV10-3A0A0K0K1G6 114 aa11.18□□□□□ -0.62
TCF3-216ENST00000592395 PRLHP81277 87 aa11.18□□□□□ -0.62
TCF3-216ENST00000592395 KCNQ1DNQ9H478 68 aa11.18□□□□□ -0.62
TCF3-216ENST00000592395 S100A12P80511 92 aa11.17□□□□□ -0.62
TCF3-216ENST00000592395 SCGB1D4Q6XE38 83 aa11.17□□□□□ -0.62
TCF3-216ENST00000592395 LINC00308Q8TCZ7 52 aa11.17□□□□□ -0.62
TCF3-216ENST00000592395 TNXBP22105 4242 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms