RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 MT1HL1P0DM35 61 aa7.05□□□□□ -1.28
VMP1-211ENST00000591315 UBE2BP63146 152 aa7.05□□□□□ -1.28
VMP1-211ENST00000591315 SND1-IT1Q9HBX3 110 aa7.05□□□□□ -1.28
VMP1-211ENST00000591315 GAGE10A6NGK3 116 aa7.04□□□□□ -1.28
VMP1-211ENST00000591315 DPM2O94777 84 aa7.04□□□□□ -1.28
VMP1-211ENST00000591315 RPL37AP8A6NKH3 93 aa7.03□□□□□ -1.28
VMP1-211ENST00000591315 IGLV7-43P04211 117 aa7.03□□□□□ -1.28
VMP1-211ENST00000591315 S100A1P23297 94 aa7.03□□□□□ -1.28
VMP1-211ENST00000591315 COA6Q5JTJ3 125 aaKnown RBP7.03□□□□□ -1.28
VMP1-211ENST00000591315 SPINK6Q6UWN8 80 aa7.03□□□□□ -1.28
VMP1-211ENST00000591315 MAP1LC3CQ9BXW4 147 aa7.03□□□□□ -1.28
VMP1-211ENST00000591315 SYS1-DBNDD2H3BUS1 97 aa7.02□□□□□ -1.29
VMP1-211ENST00000591315 IGKCP01834 107 aa7.02□□□□□ -1.29
VMP1-211ENST00000591315 SMIM13P0DJ93 91 aa7.02□□□□□ -1.29
VMP1-211ENST00000591315 PLNP26678 52 aa7.02□□□□□ -1.29
VMP1-211ENST00000591315 LINC00158P58513 81 aa7.02□□□□□ -1.29
VMP1-211ENST00000591315 MRPL55Q7Z7F7 128 aaKnown RBP7.02□□□□□ -1.29
VMP1-211ENST00000591315 LINC00167Q96N53 147 aa7.02□□□□□ -1.29
VMP1-211ENST00000591315 NDUFA12Q9UI09 145 aa7.02□□□□□ -1.29
VMP1-211ENST00000591315 PLA2G2DQ9UNK4 145 aa7.02□□□□□ -1.29
VMP1-211ENST00000591315 LEPROTO15243 131 aa7.01□□□□□ -1.29
VMP1-211ENST00000591315 VPREB1P12018 145 aa7.01□□□□□ -1.29
VMP1-211ENST00000591315 IGLV5-37A0A075B6J1 123 aa7□□□□□ -1.29
VMP1-211ENST00000591315 LOC100996750A0A140TA64 210 aa7□□□□□ -1.29
VMP1-211ENST00000591315 C3orf79P0CE67 100 aa7□□□□□ -1.29
VMP1-211ENST00000591315 LBHQ53QV2 105 aaPredicted RBP7□□□□□ -1.29
VMP1-211ENST00000591315 KRTAP4-6Q9BYQ5 205 aa7□□□□□ -1.29
VMP1-211ENST00000591315 TP73-AS1Q9UF72 201 aa7□□□□□ -1.29
VMP1-211ENST00000591315 J3QQQ9 107 aa6.99□□□□□ -1.29
VMP1-211ENST00000591315 COX17Q14061 63 aa6.99□□□□□ -1.29
VMP1-211ENST00000591315 LINC01545Q5VT33 79 aa6.99□□□□□ -1.29
VMP1-211ENST00000591315 PLEKHB2Q96CS7 222 aa6.99□□□□□ -1.29
VMP1-211ENST00000591315 KRTDAPP60985 99 aa6.98□□□□□ -1.29
VMP1-211ENST00000591315 MEIG1Q5JSS6 88 aa6.98□□□□□ -1.29
VMP1-211ENST00000591315 MIR7-3HGQ8N6C7 128 aa6.98□□□□□ -1.29
VMP1-211ENST00000591315 DAND5Q8N907 189 aa6.98□□□□□ -1.29
VMP1-211ENST00000591315 NKAPP1Q8N9T2 125 aa6.98□□□□□ -1.29
VMP1-211ENST00000591315 LINC01600Q96MT4 127 aa6.98□□□□□ -1.29
VMP1-211ENST00000591315 HMCN2Q8NDA2 5059 aa6.98□□□□□ -1.29
VMP1-211ENST00000591315 IGKV2-28A0A075B6P5 120 aa6.97□□□□□ -1.29
VMP1-211ENST00000591315 MYMXA0A1B0GTQ4 84 aa6.97□□□□□ -1.29
VMP1-211ENST00000591315 IGKV2D-28P01615 120 aa6.97□□□□□ -1.29
VMP1-211ENST00000591315 HERVK_113P61574 105 aa6.97□□□□□ -1.29
VMP1-211ENST00000591315 SFTA2Q6UW10 78 aa6.97□□□□□ -1.29
VMP1-211ENST00000591315 PET117Q6UWS5 81 aa6.97□□□□□ -1.29
VMP1-211ENST00000591315 HERV-K104P63124 156 aa6.96□□□□□ -1.3
VMP1-211ENST00000591315 REG3GQ6UW15 175 aa6.96□□□□□ -1.3
VMP1-211ENST00000591315 IGKV2D-26A0A0A0MRZ7 120 aa6.95□□□□□ -1.3
VMP1-211ENST00000591315 TMEM238C9JI98 176 aa6.95□□□□□ -1.3
VMP1-211ENST00000591315 E9PLD3 99 aa6.95□□□□□ -1.3
VMP1-211ENST00000591315 H0Y9J4 135 aa6.95□□□□□ -1.3
VMP1-211ENST00000591315 LGALS3P17931 250 aaKnown RBP6.95□□□□□ -1.3
VMP1-211ENST00000591315 KRTAP10-8P60410 259 aa6.95□□□□□ -1.3
VMP1-211ENST00000591315 DIRC1Q969H9 104 aa6.95□□□□□ -1.3
VMP1-211ENST00000591315 TTTY13Q9BZ97 58 aa6.95□□□□□ -1.3
VMP1-211ENST00000591315 IGLV1-50A0A075B6I6 118 aa6.94□□□□□ -1.3
VMP1-211ENST00000591315 BCE1O60756 84 aa6.94□□□□□ -1.3
VMP1-211ENST00000591315 BOD1L2Q8IYS8 172 aa6.94□□□□□ -1.3
VMP1-211ENST00000591315 ATOH7Q8N100 152 aa6.94□□□□□ -1.3
VMP1-211ENST00000591315 NCR3O14931 201 aa6.93□□□□□ -1.3
VMP1-211ENST00000591315 ZNF861PO60384 105 aa6.93□□□□□ -1.3
VMP1-211ENST00000591315 KRTAP1-4P0C5Y4 121 aa6.93□□□□□ -1.3
VMP1-211ENST00000591315 RPL24P83731 157 aaKnown RBP6.93□□□□□ -1.3
VMP1-211ENST00000591315 ADAMTSL4-AS1Q5T5F5 129 aa6.93□□□□□ -1.3
VMP1-211ENST00000591315 HIST3H2BBQ8N257 126 aa6.93□□□□□ -1.3
VMP1-211ENST00000591315 PRR26Q8N8Z3 221 aa6.93□□□□□ -1.3
VMP1-211ENST00000591315 A0A0J9YXY3 114 aa6.92□□□□□ -1.3
VMP1-211ENST00000591315 SOSTDC1Q6X4U4 206 aa6.92□□□□□ -1.3
VMP1-211ENST00000591315 KRTAP13-1Q8IUC0 172 aa6.92□□□□□ -1.3
VMP1-211ENST00000591315 M0R378 163 aa6.91□□□□□ -1.3
VMP1-211ENST00000591315 NMUP48645 174 aa6.91□□□□□ -1.3
VMP1-211ENST00000591315 NPC2P61916 151 aa6.91□□□□□ -1.3
VMP1-211ENST00000591315 HIST1H2BLQ99880 126 aa6.91□□□□□ -1.3
VMP1-211ENST00000591315 TMEM126AQ9H061 195 aa6.91□□□□□ -1.3
VMP1-211ENST00000591315 CDIP1Q9H305 208 aa6.91□□□□□ -1.3
VMP1-211ENST00000591315 PRLHP81277 87 aa6.9□□□□□ -1.3
VMP1-211ENST00000591315 LINC00587B1AMM8 73 aa6.89□□□□□ -1.31
VMP1-211ENST00000591315 UBE2AP49459 152 aa6.89□□□□□ -1.31
VMP1-211ENST00000591315 LITAFQ99732 161 aa6.89□□□□□ -1.31
VMP1-211ENST00000591315 ANAPC11Q9NYG5 84 aa6.89□□□□□ -1.31
VMP1-211ENST00000591315 TRBV10-3A0A0K0K1G6 114 aa6.88□□□□□ -1.31
VMP1-211ENST00000591315 ZNF815PA8K554 130 aa6.88□□□□□ -1.31
VMP1-211ENST00000591315 RPL28P46779 137 aaKnown RBP6.88□□□□□ -1.31
VMP1-211ENST00000591315 SNRPEP62304 92 aaKnown RBP6.88□□□□□ -1.31
VMP1-211ENST00000591315 FAM19A1Q7Z5A9 133 aa6.88□□□□□ -1.31
VMP1-211ENST00000591315 LOC107984156A0A0G2JMH3 177 aa6.87□□□□□ -1.31
VMP1-211ENST00000591315 C20orf202A1L168 122 aa6.87□□□□□ -1.31
VMP1-211ENST00000591315 ARL17AQ8IVW1 177 aa6.87□□□□□ -1.31
VMP1-211ENST00000591315 S100A6P06703 90 aa6.86□□□□□ -1.31
VMP1-211ENST00000591315 S100A2P29034 98 aa6.86□□□□□ -1.31
VMP1-211ENST00000591315 PCP2Q8IVA1 136 aa6.86□□□□□ -1.31
VMP1-211ENST00000591315 A0A087X002 238 aa6.85□□□□□ -1.31
VMP1-211ENST00000591315 LINC00308Q8TCZ7 52 aa6.84□□□□□ -1.31
VMP1-211ENST00000591315 KCNQ1DNQ9H478 68 aa6.84□□□□□ -1.31
VMP1-211ENST00000591315 C5orf52A6NGY3 159 aa6.83□□□□□ -1.32
VMP1-211ENST00000591315 KRTAP4-16G5E9R7 235 aaPredicted RBP6.83□□□□□ -1.32
VMP1-211ENST00000591315 PRYO14603 147 aa6.83□□□□□ -1.32
VMP1-211ENST00000591315 SPRR1AP35321 89 aa6.83□□□□□ -1.32
VMP1-211ENST00000591315 MIEN1Q9BRT3 115 aa6.83□□□□□ -1.32
VMP1-211ENST00000591315 HIGD2AQ9BW72 106 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms