RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 PRR3P79522 188 aaKnown RBP11.2□□□□□ -0.62
VAT1-208ENST00000590924 TMA7Q9Y2S6 64 aaKnown RBP11.2□□□□□ -0.62
VAT1-208ENST00000590924 TNXBP22105 4242 aa11.2□□□□□ -0.62
VAT1-208ENST00000590924 UBR4Q5T4S7 5183 aa11.19□□□□□ -0.62
VAT1-208ENST00000590924 PFN2P35080 140 aa11.18□□□□□ -0.62
VAT1-208ENST00000590924 SCGB1D1O95968 90 aa11.17□□□□□ -0.62
VAT1-208ENST00000590924 C9orf129Q5T035 196 aaKnown RBP11.17□□□□□ -0.62
VAT1-208ENST00000590924 ATOH7Q8N100 152 aa11.17□□□□□ -0.62
VAT1-208ENST00000590924 A0A1W2PNN7 141 aa11.16□□□□□ -0.62
VAT1-208ENST00000590924 LINC00158P58513 81 aa11.16□□□□□ -0.62
VAT1-208ENST00000590924 IGKV2D-26A0A0A0MRZ7 120 aa11.15□□□□□ -0.62
VAT1-208ENST00000590924 MEIG1Q5JSS6 88 aa11.15□□□□□ -0.62
VAT1-208ENST00000590924 XAGE1AQ9HD64 81 aa11.15□□□□□ -0.62
VAT1-208ENST00000590924 HSBP1L1C9JCN9 74 aa11.14□□□□□ -0.63
VAT1-208ENST00000590924 ANKRD39Q53RE8 183 aa11.14□□□□□ -0.63
VAT1-208ENST00000590924 LINC01600Q96MT4 127 aa11.14□□□□□ -0.63
VAT1-208ENST00000590924 SMIM13P0DJ93 91 aa11.13□□□□□ -0.63
VAT1-208ENST00000590924 JOSD1Q15040 202 aaPredicted RBP11.13□□□□□ -0.63
VAT1-208ENST00000590924 SND1-IT1Q9HBX3 110 aa11.13□□□□□ -0.63
VAT1-208ENST00000590924 A0A0J9YXY3 114 aa11.11□□□□□ -0.63
VAT1-208ENST00000590924 FAM168BA1KXE4 195 aa11.11□□□□□ -0.63
VAT1-208ENST00000590924 ZNF815PA8K554 130 aa11.1□□□□□ -0.63
VAT1-208ENST00000590924 TIMM17BO60830 172 aa11.1□□□□□ -0.63
VAT1-208ENST00000590924 SPINK6Q6UWN8 80 aa11.1□□□□□ -0.63
VAT1-208ENST00000590924 KRTAP7-1Q8IUC3 87 aa11.1□□□□□ -0.63
VAT1-208ENST00000590924 TP73-AS1Q9UF72 201 aa11.1□□□□□ -0.63
VAT1-208ENST00000590924 IGLV5-37A0A075B6J1 123 aa11.09□□□□□ -0.63
VAT1-208ENST00000590924 A0A0U1RRA0 63 aa11.09□□□□□ -0.63
VAT1-208ENST00000590924 FAM19A5Q7Z5A7 132 aaPredicted RBP11.09□□□□□ -0.63
VAT1-208ENST00000590924 MIR7-3HGQ8N6C7 128 aa11.09□□□□□ -0.63
VAT1-208ENST00000590924 LOC107984156A0A0G2JMH3 177 aa11.08□□□□□ -0.64
VAT1-208ENST00000590924 RPL24P83731 157 aaKnown RBP11.08□□□□□ -0.64
VAT1-208ENST00000590924 ARL17AQ8IVW1 177 aa11.08□□□□□ -0.64
VAT1-208ENST00000590924 LBHQ53QV2 105 aaPredicted RBP11.07□□□□□ -0.64
VAT1-208ENST00000590924 REG3GQ6UW15 175 aa11.07□□□□□ -0.64
VAT1-208ENST00000590924 TTTY13Q9BZ97 58 aa11.07□□□□□ -0.64
VAT1-208ENST00000590924 C22orf24Q9Y442 160 aa11.07□□□□□ -0.64
VAT1-208ENST00000590924 M0QXV9 152 aa11.06□□□□□ -0.64
VAT1-208ENST00000590924 SRSF9Q13242 221 aaKnown RBP eCLIP11.06□□□□□ -0.64
VAT1-208ENST00000590924 PHF5AQ7RTV0 110 aaKnown RBP11.05□□□□□ -0.64
VAT1-208ENST00000590924 PCP2Q8IVA1 136 aa11.05□□□□□ -0.64
VAT1-208ENST00000590924 VPREB1P12018 145 aa11.04□□□□□ -0.64
VAT1-208ENST00000590924 KRTAP10-8P60410 259 aa11.03□□□□□ -0.64
VAT1-208ENST00000590924 ADAMTSL4-AS1Q5T5F5 129 aa11.03□□□□□ -0.64
VAT1-208ENST00000590924 SCGB1D4Q6XE38 83 aa11.03□□□□□ -0.64
VAT1-208ENST00000590924 MRPL55Q7Z7F7 128 aaKnown RBP11.03□□□□□ -0.64
VAT1-208ENST00000590924 NKAPP1Q8N9T2 125 aa11.03□□□□□ -0.64
VAT1-208ENST00000590924 LITAFQ99732 161 aa11.03□□□□□ -0.64
VAT1-208ENST00000590924 PYY3Q5JQD4 70 aa11.02□□□□□ -0.65
VAT1-208ENST00000590924 LRP2P98164 4655 aa11.01□□□□□ -0.65
VAT1-208ENST00000590924 Q6ZVH6 145 aa11.01□□□□□ -0.65
VAT1-208ENST00000590924 BOD1L2Q8IYS8 172 aa11.01□□□□□ -0.65
VAT1-208ENST00000590924 DAND5Q8N907 189 aa11.01□□□□□ -0.65
VAT1-208ENST00000590924 MIEN1Q9BRT3 115 aa11.01□□□□□ -0.65
VAT1-208ENST00000590924 VAMP8Q9BV40 100 aa11.01□□□□□ -0.65
VAT1-208ENST00000590924 TMEM238C9JI98 176 aa11□□□□□ -0.65
VAT1-208ENST00000590924 DLEU1O43261 78 aa10.99□□□□□ -0.65
VAT1-208ENST00000590924 NDUFC2O95298 119 aa10.99□□□□□ -0.65
VAT1-208ENST00000590924 COX8AP10176 69 aa10.99□□□□□ -0.65
VAT1-208ENST00000590924 UBE2BP63146 152 aa10.99□□□□□ -0.65
VAT1-208ENST00000590924 LINC00167Q96N53 147 aa10.99□□□□□ -0.65
VAT1-208ENST00000590924 SPANXDQ9BXN6 97 aa10.99□□□□□ -0.65
VAT1-208ENST00000590924 PPDPFQ9H3Y8 114 aa10.99□□□□□ -0.65
VAT1-208ENST00000590924 SPANXCQ9NY87 97 aa10.99□□□□□ -0.65
VAT1-208ENST00000590924 SPATA45Q537H7 98 aa10.98□□□□□ -0.65
VAT1-208ENST00000590924 Q8NDZ9 215 aa10.98□□□□□ -0.65
VAT1-208ENST00000590924 COPS9Q8WXC6 57 aa10.98□□□□□ -0.65
VAT1-208ENST00000590924 PAM16Q9Y3D7 125 aa10.98□□□□□ -0.65
VAT1-208ENST00000590924 M0R378 163 aa10.97□□□□□ -0.65
VAT1-208ENST00000590924 IFITM1P13164 125 aa10.97□□□□□ -0.65
VAT1-208ENST00000590924 LINC00308Q8TCZ7 52 aa10.97□□□□□ -0.65
VAT1-208ENST00000590924 PSORS1C2Q9UIG4 136 aa10.97□□□□□ -0.65
VAT1-208ENST00000590924 TRBV10-2A0A0K0K1G8 114 aa10.96□□□□□ -0.65
VAT1-208ENST00000590924 SOSTDC1Q6X4U4 206 aa10.96□□□□□ -0.65
VAT1-208ENST00000590924 IGLV1-50A0A075B6I6 118 aa10.94□□□□□ -0.66
VAT1-208ENST00000590924 KRTAP11-1Q8IUC1 163 aa10.94□□□□□ -0.66
VAT1-208ENST00000590924 SPANXB1Q9NS25 103 aaPredicted RBP10.94□□□□□ -0.66
VAT1-208ENST00000590924 GAGE10A6NGK3 116 aa10.93□□□□□ -0.66
VAT1-208ENST00000590924 EIF4EBP3O60516 100 aaPredicted RBP10.92□□□□□ -0.66
VAT1-208ENST00000590924 NPC2P61916 151 aa10.92□□□□□ -0.66
VAT1-208ENST00000590924 C14orf144Q96I85 54 aa10.92□□□□□ -0.66
VAT1-208ENST00000590924 RPL37AP8A6NKH3 93 aa10.91□□□□□ -0.66
VAT1-208ENST00000590924 C1orf137Q5JT78 98 aa10.91□□□□□ -0.66
VAT1-208ENST00000590924 SLC25A34Q6PIV7 304 aa10.91□□□□□ -0.66
VAT1-208ENST00000590924 S100A12P80511 92 aa10.9□□□□□ -0.66
VAT1-208ENST00000590924 LINC00518Q8N0U6 118 aa10.9□□□□□ -0.66
VAT1-208ENST00000590924 NCR3O14931 201 aa10.89□□□□□ -0.67
VAT1-208ENST00000590924 HIGD1BQ9P298 99 aa10.89□□□□□ -0.67
VAT1-208ENST00000590924 IGKV2-28A0A075B6P5 120 aa10.88□□□□□ -0.67
VAT1-208ENST00000590924 IGKV2D-28P01615 120 aa10.88□□□□□ -0.67
VAT1-208ENST00000590924 IGLV7-43P04211 117 aa10.88□□□□□ -0.67
VAT1-208ENST00000590924 MUSTN1Q8IVN3 82 aa10.88□□□□□ -0.67
VAT1-208ENST00000590924 BCE1O60756 84 aa10.87□□□□□ -0.67
VAT1-208ENST00000590924 DIRC1Q969H9 104 aa10.86□□□□□ -0.67
VAT1-208ENST00000590924 KCNQ1DNQ9H478 68 aa10.86□□□□□ -0.67
VAT1-208ENST00000590924 CBY1Q9Y3M2 126 aa10.86□□□□□ -0.67
VAT1-208ENST00000590924 TRBV10-3A0A0K0K1G6 114 aa10.85□□□□□ -0.67
VAT1-208ENST00000590924 LOC105371267A0A1B0GV96 52 aa10.85□□□□□ -0.67
VAT1-208ENST00000590924 PRYO14603 147 aa10.85□□□□□ -0.67
VAT1-208ENST00000590924 IGLV6-57P01721 117 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms