RNA–Protein interactions for RNA: ENST00000590619.1

DNMT1-222, Transcript of DNA methyltransferase 1, human

TSL 1 (best)

Gene DNMT1, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DNMT1-222	ENST00000590619	GPR98	Q8WXG9	6306 aa		3.28	□□□□□ -1.88
DNMT1-222	ENST00000590619	MDN1	Q9NU22	5596 aa		3.27	□□□□□ -1.89
DNMT1-222	ENST00000590619	C20orf202	A1L168	122 aa		3.27	□□□□□ -1.89
DNMT1-222	ENST00000590619	COLCA2	A8K830	154 aa		3.27	□□□□□ -1.89
DNMT1-222	ENST00000590619	PPP1R2P9	O14990	202 aa		3.27	□□□□□ -1.89
DNMT1-222	ENST00000590619	TCAP	O15273	167 aa		3.27	□□□□□ -1.89
DNMT1-222	ENST00000590619	FAM231D	Q6ZW35	169 aa		3.27	□□□□□ -1.89
DNMT1-222	ENST00000590619		Q8NDZ9	215 aa		3.27	□□□□□ -1.89
DNMT1-222	ENST00000590619	C20orf78	Q9BR46	151 aa		3.27	□□□□□ -1.89
DNMT1-222	ENST00000590619	PYGO1	Q9Y3Y4	419 aa		3.27	□□□□□ -1.89
DNMT1-222	ENST00000590619	TRBV24-1	A0A075B6N3	115 aa		3.26	□□□□□ -1.89
DNMT1-222	ENST00000590619		A0A1B0GUT8	65 aa		3.26	□□□□□ -1.89
DNMT1-222	ENST00000590619	LOC105371267	A0A1B0GV96	52 aa		3.26	□□□□□ -1.89
DNMT1-222	ENST00000590619		A8MWL6	223 aa		3.26	□□□□□ -1.89
DNMT1-222	ENST00000590619	MT-ND4L	P03901	98 aa		3.26	□□□□□ -1.89
DNMT1-222	ENST00000590619	LGALS3	P17931	250 aa	Known RBP	3.26	□□□□□ -1.89
DNMT1-222	ENST00000590619	IFI27	P40305	119 aa	Predicted RBP	3.26	□□□□□ -1.89
DNMT1-222	ENST00000590619	CXCL5	P42830	114 aa		3.26	□□□□□ -1.89
DNMT1-222	ENST00000590619	RPL23	P62829	140 aa	Known RBP	3.26	□□□□□ -1.89
DNMT1-222	ENST00000590619	ADIRF	Q15847	76 aa		3.26	□□□□□ -1.89
DNMT1-222	ENST00000590619	TMEM141	Q96I45	108 aa		3.26	□□□□□ -1.89
DNMT1-222	ENST00000590619	CDKN2A-AS1	Q9UH64	79 aa		3.26	□□□□□ -1.89
DNMT1-222	ENST00000590619	CHTOP	Q9Y3Y2	248 aa	Known RBP	3.26	□□□□□ -1.89
DNMT1-222	ENST00000590619	GATC	O43716	136 aa	Known RBP	3.25	□□□□□ -1.89
DNMT1-222	ENST00000590619	ERC2-IT1	O76042	136 aa		3.25	□□□□□ -1.89
DNMT1-222	ENST00000590619	RAB5A	P20339	215 aa		3.25	□□□□□ -1.89
DNMT1-222	ENST00000590619	MRPL51	Q4U2R6	128 aa	Known RBP	3.25	□□□□□ -1.89
DNMT1-222	ENST00000590619	C2orf66	Q6UXQ4	117 aa		3.25	□□□□□ -1.89
DNMT1-222	ENST00000590619	TEX43	Q6ZNM6	134 aa		3.25	□□□□□ -1.89
DNMT1-222	ENST00000590619	FAM19A3	Q7Z5A8	133 aa		3.25	□□□□□ -1.89
DNMT1-222	ENST00000590619	ANAPC16	Q96DE5	110 aa		3.25	□□□□□ -1.89
DNMT1-222	ENST00000590619	YPEL4	Q96NS1	127 aa		3.25	□□□□□ -1.89
DNMT1-222	ENST00000590619	TIMM17A	Q99595	171 aa		3.25	□□□□□ -1.89
DNMT1-222	ENST00000590619	RPL24	P83731	157 aa	Known RBP	3.24	□□□□□ -1.89
DNMT1-222	ENST00000590619	KIAA1644	Q3SXP7	199 aa		3.24	□□□□□ -1.89
DNMT1-222	ENST00000590619	BORCS7	Q96B45	105 aa		3.24	□□□□□ -1.89
DNMT1-222	ENST00000590619	AMELX	Q99217	191 aa		3.24	□□□□□ -1.89
DNMT1-222	ENST00000590619	VCX2	Q9H322	139 aa		3.24	□□□□□ -1.89
DNMT1-222	ENST00000590619	HIGD1C	A8MV81	97 aa		3.23	□□□□□ -1.89
DNMT1-222	ENST00000590619	S100P	P25815	95 aa		3.23	□□□□□ -1.89
DNMT1-222	ENST00000590619	PFN2	P35080	140 aa		3.23	□□□□□ -1.89
DNMT1-222	ENST00000590619	FAM104B	Q5XKR9	115 aa		3.23	□□□□□ -1.89
DNMT1-222	ENST00000590619	HRCT1	Q6UXD1	115 aa		3.23	□□□□□ -1.89
DNMT1-222	ENST00000590619	COX7B2	Q8TF08	81 aa		3.23	□□□□□ -1.89
DNMT1-222	ENST00000590619	C2orf88	Q9BSF0	95 aa		3.23	□□□□□ -1.89
DNMT1-222	ENST00000590619	SMIM2	Q9BVW6	85 aa		3.23	□□□□□ -1.89
DNMT1-222	ENST00000590619	SND1-IT1	Q9HBX3	110 aa		3.23	□□□□□ -1.89
DNMT1-222	ENST00000590619	KRTAP5-9	P26371	169 aa		3.22	□□□□□ -1.89
DNMT1-222	ENST00000590619	SPRR1A	P35321	89 aa		3.22	□□□□□ -1.89
DNMT1-222	ENST00000590619	SMIM1	B2RUZ4	78 aa		3.21	□□□□□ -1.9
DNMT1-222	ENST00000590619	TRGC2	P03986	189 aa		3.21	□□□□□ -1.9
DNMT1-222	ENST00000590619	S100A6	P06703	90 aa		3.21	□□□□□ -1.9
DNMT1-222	ENST00000590619	CKS2	P33552	79 aa		3.21	□□□□□ -1.9
DNMT1-222	ENST00000590619	HERVK_113	P63121	156 aa		3.21	□□□□□ -1.9
DNMT1-222	ENST00000590619	RIG	Q13278	110 aa		3.21	□□□□□ -1.9
DNMT1-222	ENST00000590619	PDZD11	Q5EBL8	140 aa		3.21	□□□□□ -1.9
DNMT1-222	ENST00000590619	CT83	Q5H943	113 aa		3.21	□□□□□ -1.9
DNMT1-222	ENST00000590619	C9orf153	Q5TBE3	101 aa		3.21	□□□□□ -1.9
DNMT1-222	ENST00000590619	LIMD2	Q9BT23	127 aa		3.21	□□□□□ -1.9
DNMT1-222	ENST00000590619	TRAV9-1	A0A075B6T8	112 aa		3.2	□□□□□ -1.9
DNMT1-222	ENST00000590619	C5orf52	A6NGY3	159 aa		3.2	□□□□□ -1.9
DNMT1-222	ENST00000590619	IGIP	A6NJ69	53 aa		3.2	□□□□□ -1.9
DNMT1-222	ENST00000590619	NPY	P01303	97 aa		3.2	□□□□□ -1.9
DNMT1-222	ENST00000590619	SNRPE	P62304	92 aa	Known RBP	3.2	□□□□□ -1.9
DNMT1-222	ENST00000590619	KCNQ1DN	Q9H478	68 aa		3.2	□□□□□ -1.9
DNMT1-222	ENST00000590619	OSTC	Q9NRP0	149 aa		3.2	□□□□□ -1.9
DNMT1-222	ENST00000590619		V9GYV3	84 aa		3.2	□□□□□ -1.9
DNMT1-222	ENST00000590619	LOC389332	A0A1B0GUA5	103 aa		3.19	□□□□□ -1.9
DNMT1-222	ENST00000590619	PRSS47	A8MTI9	375 aa		3.19	□□□□□ -1.9
DNMT1-222	ENST00000590619	HIST1H2BK	O60814	126 aa		3.19	□□□□□ -1.9
DNMT1-222	ENST00000590619	HIST1H2BJ	P06899	126 aa		3.19	□□□□□ -1.9
DNMT1-222	ENST00000590619	HIST1H2BO	P23527	126 aa		3.19	□□□□□ -1.9
DNMT1-222	ENST00000590619	HIST1H2BB	P33778	126 aa		3.19	□□□□□ -1.9
DNMT1-222	ENST00000590619	AKR1D1	P51857	326 aa		3.19	□□□□□ -1.9
DNMT1-222	ENST00000590619	NDUFA6	P56556	154 aa		3.19	□□□□□ -1.9
DNMT1-222	ENST00000590619	HIST1H2BD	P58876	126 aa		3.19	□□□□□ -1.9
DNMT1-222	ENST00000590619	HIST1H2BC	P62807	126 aa		3.19	□□□□□ -1.9
DNMT1-222	ENST00000590619	SEC11A	P67812	179 aa		3.19	□□□□□ -1.9
DNMT1-222	ENST00000590619	FABP9	Q0Z7S8	132 aa		3.19	□□□□□ -1.9
DNMT1-222	ENST00000590619	HIST2H2BE	Q16778	126 aa		3.19	□□□□□ -1.9
DNMT1-222	ENST00000590619	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	3.19	□□□□□ -1.9
DNMT1-222	ENST00000590619	C1orf195	Q5TG92	126 aa		3.19	□□□□□ -1.9
DNMT1-222	ENST00000590619	ATP11AUN	Q6ZP68	121 aa		3.19	□□□□□ -1.9
DNMT1-222	ENST00000590619	HIST1H2BH	Q93079	126 aa		3.19	□□□□□ -1.9
DNMT1-222	ENST00000590619	HIST1H2BN	Q99877	126 aa		3.19	□□□□□ -1.9
DNMT1-222	ENST00000590619	HIST1H2BM	Q99879	126 aa		3.19	□□□□□ -1.9
DNMT1-222	ENST00000590619	KRTAP2-2	Q9BYT5	123 aa		3.19	□□□□□ -1.9
DNMT1-222	ENST00000590619	KRTAP2-1	Q9BYU5	128 aa		3.19	□□□□□ -1.9
DNMT1-222	ENST00000590619	ETDC	A0A1B0GVM5	59 aa		3.18	□□□□□ -1.9
DNMT1-222	ENST00000590619		B5MCH6	92 aa		3.18	□□□□□ -1.9
DNMT1-222	ENST00000590619		D6R8Y8	96 aa		3.18	□□□□□ -1.9
DNMT1-222	ENST00000590619	PRY	O14603	147 aa		3.18	□□□□□ -1.9
DNMT1-222	ENST00000590619	ATP5L	O75964	103 aa		3.18	□□□□□ -1.9
DNMT1-222	ENST00000590619	C20orf166-AS1	Q96NR2	134 aa		3.18	□□□□□ -1.9
DNMT1-222	ENST00000590619	TRAPPC1	Q9Y5R8	145 aa		3.18	□□□□□ -1.9
DNMT1-222	ENST00000590619	SMIM27	A0A1W2PRY6	76 aa		3.17	□□□□□ -1.9
DNMT1-222	ENST00000590619	S100A8	P05109	93 aa		3.17	□□□□□ -1.9
DNMT1-222	ENST00000590619	SPINK8	P0C7L1	97 aa		3.17	□□□□□ -1.9
DNMT1-222	ENST00000590619	COX19	Q49B96	90 aa		3.17	□□□□□ -1.9
DNMT1-222	ENST00000590619	MRPL54	Q6P161	138 aa	Known RBP	3.17	□□□□□ -1.9

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