RNA–Protein interactions for RNA: ENST00000590416.1

LSM14A-208, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 2

Gene LSM14A, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-208ENST00000590416 C22orf24Q9Y442 160 aa10.5□□□□□ -0.73
LSM14A-208ENST00000590416 INAFM2P0DMQ5 153 aa10.49□□□□□ -0.73
LSM14A-208ENST00000590416 KRTAP7-1Q8IUC3 87 aa10.49□□□□□ -0.73
LSM14A-208ENST00000590416 IGKV2D-26A0A0A0MRZ7 120 aa10.48□□□□□ -0.73
LSM14A-208ENST00000590416 ZNF815PA8K554 130 aa10.48□□□□□ -0.73
LSM14A-208ENST00000590416 HSBP1L1C9JCN9 74 aa10.48□□□□□ -0.73
LSM14A-208ENST00000590416 LBHQ53QV2 105 aaPredicted RBP10.48□□□□□ -0.73
LSM14A-208ENST00000590416 PRR3P79522 188 aaKnown RBP10.47□□□□□ -0.73
LSM14A-208ENST00000590416 ANKRD39Q53RE8 183 aa10.47□□□□□ -0.73
LSM14A-208ENST00000590416 PLA2G2DQ9UNK4 145 aa10.47□□□□□ -0.73
LSM14A-208ENST00000590416 A0A0J9YXY3 114 aa10.46□□□□□ -0.73
LSM14A-208ENST00000590416 RPL24P83731 157 aaKnown RBP10.46□□□□□ -0.73
LSM14A-208ENST00000590416 MRPL55Q7Z7F7 128 aaKnown RBP10.46□□□□□ -0.73
LSM14A-208ENST00000590416 DAND5Q8N907 189 aa10.46□□□□□ -0.73
LSM14A-208ENST00000590416 TTTY13Q9BZ97 58 aa10.46□□□□□ -0.73
LSM14A-208ENST00000590416 GAGE10A6NGK3 116 aa10.45□□□□□ -0.74
LSM14A-208ENST00000590416 TP73-AS1Q9UF72 201 aa10.45□□□□□ -0.74
LSM14A-208ENST00000590416 PSORS1C2Q9UIG4 136 aa10.45□□□□□ -0.74
LSM14A-208ENST00000590416 KRTAP10-4P60372 401 aaPredicted RBP10.44□□□□□ -0.74
LSM14A-208ENST00000590416 C1orf137Q5JT78 98 aa10.44□□□□□ -0.74
LSM14A-208ENST00000590416 MIEN1Q9BRT3 115 aa10.44□□□□□ -0.74
LSM14A-208ENST00000590416 VPREB1P12018 145 aa10.43□□□□□ -0.74
LSM14A-208ENST00000590416 SCGB1D4Q6XE38 83 aa10.43□□□□□ -0.74
LSM14A-208ENST00000590416 BOD1L2Q8IYS8 172 aa10.43□□□□□ -0.74
LSM14A-208ENST00000590416 ABCA13Q86UQ4 5058 aa10.43□□□□□ -0.74
LSM14A-208ENST00000590416 IGLV5-37A0A075B6J1 123 aa10.42□□□□□ -0.74
LSM14A-208ENST00000590416 RPL37AP8A6NKH3 93 aa10.42□□□□□ -0.74
LSM14A-208ENST00000590416 NPC2P61916 151 aa10.42□□□□□ -0.74
LSM14A-208ENST00000590416 LINC00167Q96N53 147 aa10.42□□□□□ -0.74
LSM14A-208ENST00000590416 KRTAP11-1Q8IUC1 163 aa10.41□□□□□ -0.74
LSM14A-208ENST00000590416 HNRNPA3P51991 378 aaKnown RBP10.4□□□□□ -0.74
LSM14A-208ENST00000590416 SRRM2Q9UQ35 2752 aaKnown RBP10.39□□□□□ -0.75
LSM14A-208ENST00000590416 NCR3O14931 201 aa10.39□□□□□ -0.75
LSM14A-208ENST00000590416 PCP2Q8IVA1 136 aa10.39□□□□□ -0.75
LSM14A-208ENST00000590416 Q8NDZ9 215 aa10.39□□□□□ -0.75
LSM14A-208ENST00000590416 PKHD1L1Q86WI1 4243 aa10.39□□□□□ -0.75
LSM14A-208ENST00000590416 IGKV2-28A0A075B6P5 120 aa10.38□□□□□ -0.75
LSM14A-208ENST00000590416 TIMM17BO60830 172 aa10.38□□□□□ -0.75
LSM14A-208ENST00000590416 IGKV2D-28P01615 120 aa10.38□□□□□ -0.75
LSM14A-208ENST00000590416 ADAMTSL4-AS1Q5T5F5 129 aa10.38□□□□□ -0.75
LSM14A-208ENST00000590416 PCLOQ9Y6V0 5065 aa10.36□□□□□ -0.75
LSM14A-208ENST00000590416 TMEM238C9JI98 176 aa10.36□□□□□ -0.75
LSM14A-208ENST00000590416 M0R378 163 aa10.36□□□□□ -0.75
LSM14A-208ENST00000590416 LITAFQ99732 161 aa10.35□□□□□ -0.75
LSM14A-208ENST00000590416 IGLV7-43P04211 117 aa10.34□□□□□ -0.75
LSM14A-208ENST00000590416 JOSD1Q15040 202 aaPredicted RBP10.34□□□□□ -0.75
LSM14A-208ENST00000590416 LOC107984156A0A0G2JMH3 177 aa10.33□□□□□ -0.76
LSM14A-208ENST00000590416 SPINK6Q6UWN8 80 aa10.33□□□□□ -0.76
LSM14A-208ENST00000590416 SOSTDC1Q6X4U4 206 aa10.33□□□□□ -0.76
LSM14A-208ENST00000590416 ARL17AQ8IVW1 177 aa10.33□□□□□ -0.76
LSM14A-208ENST00000590416 LINC00308Q8TCZ7 52 aa10.33□□□□□ -0.76
LSM14A-208ENST00000590416 VAMP8Q9BV40 100 aa10.33□□□□□ -0.76
LSM14A-208ENST00000590416 PAM16Q9Y3D7 125 aa10.33□□□□□ -0.76
LSM14A-208ENST00000590416 IGLV1-50A0A075B6I6 118 aa10.32□□□□□ -0.76
LSM14A-208ENST00000590416 FLG2Q5D862 2391 aaPredicted RBP10.31□□□□□ -0.76
LSM14A-208ENST00000590416 SPATA45Q537H7 98 aa10.31□□□□□ -0.76
LSM14A-208ENST00000590416 SPANXDQ9BXN6 97 aa10.31□□□□□ -0.76
LSM14A-208ENST00000590416 SPANXB1Q9NS25 103 aaPredicted RBP10.31□□□□□ -0.76
LSM14A-208ENST00000590416 SPANXCQ9NY87 97 aa10.31□□□□□ -0.76
LSM14A-208ENST00000590416 EIF4EBP3O60516 100 aaPredicted RBP10.3□□□□□ -0.76
LSM14A-208ENST00000590416 BCE1O60756 84 aa10.3□□□□□ -0.76
LSM14A-208ENST00000590416 NDUFC2O95298 119 aa10.3□□□□□ -0.76
LSM14A-208ENST00000590416 REG3GQ6UW15 175 aa10.3□□□□□ -0.76
LSM14A-208ENST00000590416 COPS9Q8WXC6 57 aa10.3□□□□□ -0.76
LSM14A-208ENST00000590416 UBE2AP49459 152 aa10.29□□□□□ -0.76
LSM14A-208ENST00000590416 S100A12P80511 92 aa10.29□□□□□ -0.76
LSM14A-208ENST00000590416 S100A7L2Q5SY68 101 aa10.29□□□□□ -0.76
LSM14A-208ENST00000590416 TRBV10-2A0A0K0K1G8 114 aa10.28□□□□□ -0.76
LSM14A-208ENST00000590416 SRSF9Q13242 221 aaKnown RBP eCLIP10.28□□□□□ -0.76
LSM14A-208ENST00000590416 TMEM126AQ9H061 195 aa10.28□□□□□ -0.76
LSM14A-208ENST00000590416 TRBV10-3A0A0K0K1G6 114 aa10.27□□□□□ -0.77
LSM14A-208ENST00000590416 COX8AP10176 69 aa10.27□□□□□ -0.77
LSM14A-208ENST00000590416 DDTP30046 118 aa10.27□□□□□ -0.77
LSM14A-208ENST00000590416 Q6ZVH6 145 aa10.27□□□□□ -0.77
LSM14A-208ENST00000590416 FAM19A1Q7Z5A9 133 aa10.27□□□□□ -0.77
LSM14A-208ENST00000590416 DIRC1Q969H9 104 aa10.27□□□□□ -0.77
LSM14A-208ENST00000590416 PRYO14603 147 aa10.26□□□□□ -0.77
LSM14A-208ENST00000590416 ZNF861PO60384 105 aa10.26□□□□□ -0.77
LSM14A-208ENST00000590416 IFITM1P13164 125 aa10.26□□□□□ -0.77
LSM14A-208ENST00000590416 RPL28P46779 137 aaKnown RBP10.26□□□□□ -0.77
LSM14A-208ENST00000590416 PYY3Q5JQD4 70 aa10.26□□□□□ -0.77
LSM14A-208ENST00000590416 C14orf144Q96I85 54 aa10.26□□□□□ -0.77
LSM14A-208ENST00000590416 J3QL48 77 aa10.25□□□□□ -0.77
LSM14A-208ENST00000590416 MUSTN1Q8IVN3 82 aa10.25□□□□□ -0.77
LSM14A-208ENST00000590416 OR13C6PQ8NH95 151 aa10.25□□□□□ -0.77
LSM14A-208ENST00000590416 H0Y9J4 135 aa10.23□□□□□ -0.77
LSM14A-208ENST00000590416 OXTP01178 125 aa10.23□□□□□ -0.77
LSM14A-208ENST00000590416 PRLHP81277 87 aa10.23□□□□□ -0.77
LSM14A-208ENST00000590416 LINC00518Q8N0U6 118 aa10.22□□□□□ -0.77
LSM14A-208ENST00000590416 KCNQ1DNQ9H478 68 aa10.22□□□□□ -0.77
LSM14A-208ENST00000590416 ETDCA0A1B0GVM5 59 aa10.21□□□□□ -0.77
LSM14A-208ENST00000590416 KRTAP29-1A8MX34 341 aaPredicted RBP10.21□□□□□ -0.77
LSM14A-208ENST00000590416 DLEU1O43261 78 aa10.21□□□□□ -0.77
LSM14A-208ENST00000590416 SLC25A34Q6PIV7 304 aa10.21□□□□□ -0.77
LSM14A-208ENST00000590416 TRAV23DV6A0A075B6W5 121 aa10.2□□□□□ -0.78
LSM14A-208ENST00000590416 MYCBP2O75592 4640 aa10.2□□□□□ -0.78
LSM14A-208ENST00000590416 IGLV6-57P01721 117 aa10.2□□□□□ -0.78
LSM14A-208ENST00000590416 HIST1H4GQ99525 98 aa10.2□□□□□ -0.78
LSM14A-208ENST00000590416 CBY1Q9Y3M2 126 aa10.19□□□□□ -0.78
LSM14A-208ENST00000590416 PPDPFQ9H3Y8 114 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms