RNA–Protein interactions for RNA: ENST00000590407.1

PDE4A-207, Transcript of phosphodiesterase 4A, humanhuman

TSL 1 (best)

Gene PDE4A, Length 1,770 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-207ENST00000590407 CYSRT1A8MQ03 144 aa8.36□□□□□ -1.07
PDE4A-207ENST00000590407 J3KT08 172 aa8.36□□□□□ -1.07
PDE4A-207ENST00000590407 SPART-AS1P0CW21 52 aa8.36□□□□□ -1.07
PDE4A-207ENST00000590407 RBM3P98179 157 aaKnown RBP8.36□□□□□ -1.07
PDE4A-207ENST00000590407 PDZD2O15018 2839 aa8.35□□□□□ -1.07
PDE4A-207ENST00000590407 FASNP49327 2511 aaKnown RBP8.35□□□□□ -1.07
PDE4A-207ENST00000590407 BAHCC1Q9P281 2608 aa8.35□□□□□ -1.07
PDE4A-207ENST00000590407 SETD2Q9BYW2 2564 aaPredicted RBP8.35□□□□□ -1.07
PDE4A-207ENST00000590407 GCN1Q92616 2671 aaKnown RBP8.35□□□□□ -1.07
PDE4A-207ENST00000590407 TRBV7-6A0A0J9YX20 115 aa8.35□□□□□ -1.07
PDE4A-207ENST00000590407 CELA1Q9UNI1 258 aa8.35□□□□□ -1.07
PDE4A-207ENST00000590407 FN1P02751 2386 aaKnown RBP8.34□□□□□ -1.07
PDE4A-207ENST00000590407 NIPBLQ6KC79 2804 aaeCLIP8.34□□□□□ -1.07
PDE4A-207ENST00000590407 GHRHP01286 108 aa8.34□□□□□ -1.07
PDE4A-207ENST00000590407 NDUFC2-KCTD14E9PQ53 114 aa8.33□□□□□ -1.08
PDE4A-207ENST00000590407 DEFB4AO15263 64 aa8.33□□□□□ -1.08
PDE4A-207ENST00000590407 ENHOQ6UWT2 76 aa8.33□□□□□ -1.08
PDE4A-207ENST00000590407 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.33□□□□□ -1.08
PDE4A-207ENST00000590407 WIPF1O43516 503 aa8.32□□□□□ -1.08
PDE4A-207ENST00000590407 DIRC1Q969H9 104 aa8.32□□□□□ -1.08
PDE4A-207ENST00000590407 MTORP42345 2549 aa8.31□□□□□ -1.08
PDE4A-207ENST00000590407 ACANP16112 2415 aa8.31□□□□□ -1.08
PDE4A-207ENST00000590407 SPATA3Q8NHX4 192 aa8.31□□□□□ -1.08
PDE4A-207ENST00000590407 CYSTM1Q9H1C7 97 aa8.31□□□□□ -1.08
PDE4A-207ENST00000590407 KLK12Q9UKR0 248 aa8.31□□□□□ -1.08
PDE4A-207ENST00000590407 TRAV23DV6A0A075B6W5 121 aa8.3□□□□□ -1.08
PDE4A-207ENST00000590407 H3BNG1 76 aa8.3□□□□□ -1.08
PDE4A-207ENST00000590407 FAM19A1Q7Z5A9 133 aa8.3□□□□□ -1.08
PDE4A-207ENST00000590407 DSCR8Q96T75 97 aa8.3□□□□□ -1.08
PDE4A-207ENST00000590407 C6orf48Q9UBA6 75 aa8.3□□□□□ -1.08
PDE4A-207ENST00000590407 LAMTOR3Q9UHA4 124 aa8.3□□□□□ -1.08
PDE4A-207ENST00000590407 Q6ZQY7 126 aa8.3□□□□□ -1.08
PDE4A-207ENST00000590407 CXCL6P80162 114 aa8.29□□□□□ -1.08
PDE4A-207ENST00000590407 ELOF1P60002 83 aaKnown RBP8.28□□□□□ -1.08
PDE4A-207ENST00000590407 CUBNO60494 3623 aa8.28□□□□□ -1.08
PDE4A-207ENST00000590407 TRBV7-4A0A0J9YYF1 115 aa8.27□□□□□ -1.08
PDE4A-207ENST00000590407 J3QKU1 62 aa8.27□□□□□ -1.08
PDE4A-207ENST00000590407 ZNF73O43830 326 aaPredicted RBP8.27□□□□□ -1.08
PDE4A-207ENST00000590407 COX7BP24311 80 aa8.27□□□□□ -1.08
PDE4A-207ENST00000590407 EGFEM1PQ0D2K5 195 aa8.27□□□□□ -1.08
PDE4A-207ENST00000590407 Q6ZVQ6 151 aa8.27□□□□□ -1.08
PDE4A-207ENST00000590407 WFDC9Q8NEX5 89 aa8.27□□□□□ -1.08
PDE4A-207ENST00000590407 HELZ2Q9BYK8 2649 aaKnown RBP8.27□□□□□ -1.09
PDE4A-207ENST00000590407 HIVEP2P31629 2446 aa8.27□□□□□ -1.09
PDE4A-207ENST00000590407 F8WDY8 70 aa8.27□□□□□ -1.09
PDE4A-207ENST00000590407 LINC01547P58512 204 aaPredicted RBP8.27□□□□□ -1.09
PDE4A-207ENST00000590407 KRTAP26-1Q6PEX3 210 aa8.27□□□□□ -1.09
PDE4A-207ENST00000590407 DPH3Q96FX2 82 aa8.27□□□□□ -1.09
PDE4A-207ENST00000590407 SMR3AQ99954 134 aa8.27□□□□□ -1.09
PDE4A-207ENST00000590407 TRAV7A0A075B6U4 112 aa8.26□□□□□ -1.09
PDE4A-207ENST00000590407 VPREB1P12018 145 aa8.26□□□□□ -1.09
PDE4A-207ENST00000590407 TENM4Q6N022 2769 aa8.26□□□□□ -1.09
PDE4A-207ENST00000590407 LOC107984640A0A0U1RRK4 108 aa8.25□□□□□ -1.09
PDE4A-207ENST00000590407 M0R378 163 aa8.25□□□□□ -1.09
PDE4A-207ENST00000590407 HTN3P15516 51 aa8.25□□□□□ -1.09
PDE4A-207ENST00000590407 FAM19A5Q7Z5A7 132 aaPredicted RBP8.24□□□□□ -1.09
PDE4A-207ENST00000590407 M0R2N4 97 aa8.23□□□□□ -1.09
PDE4A-207ENST00000590407 CAMK2N2Q96S95 79 aa8.22□□□□□ -1.09
PDE4A-207ENST00000590407 XAGE1AQ9HD64 81 aa8.22□□□□□ -1.09
PDE4A-207ENST00000590407 LINC00528Q8N1L1 170 aa8.21□□□□□ -1.1
PDE4A-207ENST00000590407 HAMPP81172 84 aa8.2□□□□□ -1.1
PDE4A-207ENST00000590407 KPRPQ5T749 579 aaPredicted RBP8.2□□□□□ -1.1
PDE4A-207ENST00000590407 C15orf56Q8N910 161 aa8.2□□□□□ -1.1
PDE4A-207ENST00000590407 NBEAL2Q6ZNJ1 2754 aa8.19□□□□□ -1.1
PDE4A-207ENST00000590407 FLNBO75369 2602 aaKnown RBP8.19□□□□□ -1.1
PDE4A-207ENST00000590407 KLKP1Q107X0 134 aa8.19□□□□□ -1.1
PDE4A-207ENST00000590407 Q6ZRU5 148 aa8.19□□□□□ -1.1
PDE4A-207ENST00000590407 WFDC10BQ8IUB3 73 aa8.19□□□□□ -1.1
PDE4A-207ENST00000590407 C20orf197Q8N268 126 aa8.18□□□□□ -1.1
PDE4A-207ENST00000590407 ITPR2Q14571 2701 aa8.18□□□□□ -1.1
PDE4A-207ENST00000590407 UNC79Q9P2D8 2635 aa8.17□□□□□ -1.1
PDE4A-207ENST00000590407 INAFM1C9JVW0 142 aa8.17□□□□□ -1.1
PDE4A-207ENST00000590407 HIGD2BQ4VC39 106 aa8.17□□□□□ -1.1
PDE4A-207ENST00000590407 EPM2AB3EWF7 344 aa8.16□□□□□ -1.1
PDE4A-207ENST00000590407 H7BZZ5 65 aa8.16□□□□□ -1.1
PDE4A-207ENST00000590407 LINC01556Q5JQF7 62 aa8.16□□□□□ -1.1
PDE4A-207ENST00000590407 OXTP01178 125 aa8.15□□□□□ -1.1
PDE4A-207ENST00000590407 KCNQ1DNQ9H478 68 aa8.15□□□□□ -1.1
PDE4A-207ENST00000590407 TRAV10A0A0B4J240 114 aa8.15□□□□□ -1.11
PDE4A-207ENST00000590407 FAM236DA0A1B0GTK5 79 aa8.15□□□□□ -1.11
PDE4A-207ENST00000590407 FAM236CP0DP71 79 aa8.15□□□□□ -1.11
PDE4A-207ENST00000590407 C5orf47Q569G3 176 aa8.15□□□□□ -1.11
PDE4A-207ENST00000590407 A0A1B0GW54 56 aa8.14□□□□□ -1.11
PDE4A-207ENST00000590407 C1orf43Q9BWL3 253 aa8.14□□□□□ -1.11
PDE4A-207ENST00000590407 PLA2G2DQ9UNK4 145 aa8.14□□□□□ -1.11
PDE4A-207ENST00000590407 VWFP04275 2813 aa8.14□□□□□ -1.11
PDE4A-207ENST00000590407 NDUFC1O43677 76 aa8.13□□□□□ -1.11
PDE4A-207ENST00000590407 ERC2-IT1O76042 136 aa8.13□□□□□ -1.11
PDE4A-207ENST00000590407 Q6ZRP5 223 aa8.13□□□□□ -1.11
PDE4A-207ENST00000590407 NOTCH2Q04721 2471 aa8.13□□□□□ -1.11
PDE4A-207ENST00000590407 TLX1NBP0CAT3 122 aa8.12□□□□□ -1.11
PDE4A-207ENST00000590407 ESRGQ1W209 222 aa8.12□□□□□ -1.11
PDE4A-207ENST00000590407 SYCNQ0VAF6 134 aa8.12□□□□□ -1.11
PDE4A-207ENST00000590407 Q6ZTC4 211 aa8.12□□□□□ -1.11
PDE4A-207ENST00000590407 SERP1Q9Y6X1 66 aa8.12□□□□□ -1.11
PDE4A-207ENST00000590407 HECTD1Q9ULT8 2610 aa8.11□□□□□ -1.11
PDE4A-207ENST00000590407 IGLV5-48A0A075B6I7 105 aa8.1□□□□□ -1.11
PDE4A-207ENST00000590407 IGLV5-37A0A075B6J1 123 aa8.1□□□□□ -1.11
PDE4A-207ENST00000590407 DNAH10OSP0CZ25 163 aa8.09□□□□□ -1.11
PDE4A-207ENST00000590407 ATP5EP56381 51 aaPredicted RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms