RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 A0A0U1RRA0 63 aa13.22□□□□□ -0.29
ATG4D-212ENST00000590096 HIST1H2BLQ99880 126 aa13.22□□□□□ -0.29
ATG4D-212ENST00000590096 SMIM13P0DJ93 91 aa13.21□□□□□ -0.29
ATG4D-212ENST00000590096 LBHQ53QV2 105 aaPredicted RBP13.21□□□□□ -0.29
ATG4D-212ENST00000590096 PSORS1C2Q9UIG4 136 aa13.21□□□□□ -0.29
ATG4D-212ENST00000590096 FLG2Q5D862 2391 aaPredicted RBP13.2□□□□□ -0.3
ATG4D-212ENST00000590096 AKR1D1P51857 326 aa13.2□□□□□ -0.3
ATG4D-212ENST00000590096 HNRNPA3P51991 378 aaKnown RBP13.2□□□□□ -0.3
ATG4D-212ENST00000590096 SNRPEP62304 92 aaKnown RBP13.2□□□□□ -0.3
ATG4D-212ENST00000590096 NKAPP1Q8N9T2 125 aa13.2□□□□□ -0.3
ATG4D-212ENST00000590096 TP73-AS1Q9UF72 201 aa13.2□□□□□ -0.3
ATG4D-212ENST00000590096 MYCBP2O75592 4640 aa13.19□□□□□ -0.3
ATG4D-212ENST00000590096 MRPL55Q7Z7F7 128 aaKnown RBP13.18□□□□□ -0.3
ATG4D-212ENST00000590096 PKHD1L1Q86WI1 4243 aa13.17□□□□□ -0.3
ATG4D-212ENST00000590096 RPL24P83731 157 aaKnown RBP13.17□□□□□ -0.3
ATG4D-212ENST00000590096 C1orf137Q5JT78 98 aa13.17□□□□□ -0.3
ATG4D-212ENST00000590096 IGLV5-37A0A075B6J1 123 aa13.16□□□□□ -0.3
ATG4D-212ENST00000590096 MIR7-3HGQ8N6C7 128 aa13.16□□□□□ -0.3
ATG4D-212ENST00000590096 C5orf52A6NGY3 159 aa13.14□□□□□ -0.31
ATG4D-212ENST00000590096 KRTAP11-1Q8IUC1 163 aa13.14□□□□□ -0.31
ATG4D-212ENST00000590096 ATOH7Q8N100 152 aa13.14□□□□□ -0.31
ATG4D-212ENST00000590096 VPREB1P12018 145 aa13.13□□□□□ -0.31
ATG4D-212ENST00000590096 LINC00167Q96N53 147 aa13.13□□□□□ -0.31
ATG4D-212ENST00000590096 GAGE10A6NGK3 116 aa13.11□□□□□ -0.31
ATG4D-212ENST00000590096 IGKV2D-26A0A0A0MRZ7 120 aa13.1□□□□□ -0.31
ATG4D-212ENST00000590096 A0A0J9YXY3 114 aa13.1□□□□□ -0.31
ATG4D-212ENST00000590096 RPL37AP8A6NKH3 93 aa13.1□□□□□ -0.31
ATG4D-212ENST00000590096 SPINK6Q6UWN8 80 aa13.1□□□□□ -0.31
ATG4D-212ENST00000590096 ZNF815PA8K554 130 aa13.09□□□□□ -0.31
ATG4D-212ENST00000590096 BOD1L2Q8IYS8 172 aa13.09□□□□□ -0.31
ATG4D-212ENST00000590096 DAND5Q8N907 189 aa13.09□□□□□ -0.31
ATG4D-212ENST00000590096 IGLV7-43P04211 117 aa13.08□□□□□ -0.32
ATG4D-212ENST00000590096 SRSF9Q13242 221 aaKnown RBP eCLIP13.07□□□□□ -0.32
ATG4D-212ENST00000590096 ANKRD39Q53RE8 183 aa13.07□□□□□ -0.32
ATG4D-212ENST00000590096 Q8NDZ9 215 aa13.07□□□□□ -0.32
ATG4D-212ENST00000590096 MIEN1Q9BRT3 115 aa13.07□□□□□ -0.32
ATG4D-212ENST00000590096 TTTY13Q9BZ97 58 aa13.06□□□□□ -0.32
ATG4D-212ENST00000590096 IGKV2-28A0A075B6P5 120 aa13.05□□□□□ -0.32
ATG4D-212ENST00000590096 HSBP1L1C9JCN9 74 aa13.05□□□□□ -0.32
ATG4D-212ENST00000590096 OXTP01178 125 aa13.05□□□□□ -0.32
ATG4D-212ENST00000590096 IGKV2D-28P01615 120 aa13.05□□□□□ -0.32
ATG4D-212ENST00000590096 KRTAP29-1A8MX34 341 aaPredicted RBP13.04□□□□□ -0.32
ATG4D-212ENST00000590096 J3QL48 77 aa13.04□□□□□ -0.32
ATG4D-212ENST00000590096 SCGB1D1O95968 90 aa13.04□□□□□ -0.32
ATG4D-212ENST00000590096 LOC107984156A0A0G2JMH3 177 aa13.03□□□□□ -0.32
ATG4D-212ENST00000590096 M0R378 163 aa13.03□□□□□ -0.32
ATG4D-212ENST00000590096 ARL17AQ8IVW1 177 aa13.03□□□□□ -0.32
ATG4D-212ENST00000590096 FAT3Q8TDW7 4589 aa13.02□□□□□ -0.32
ATG4D-212ENST00000590096 IGLV1-50A0A075B6I6 118 aa13.02□□□□□ -0.33
ATG4D-212ENST00000590096 TIMM17BO60830 172 aa13.02□□□□□ -0.33
ATG4D-212ENST00000590096 ADAMTSL4-AS1Q5T5F5 129 aa13.02□□□□□ -0.33
ATG4D-212ENST00000590096 REG3GQ6UW15 175 aa13.02□□□□□ -0.33
ATG4D-212ENST00000590096 LRP1Q07954 4544 aaKnown RBP13.01□□□□□ -0.33
ATG4D-212ENST00000590096 NCR3O14931 201 aa13.01□□□□□ -0.33
ATG4D-212ENST00000590096 SCGB1D4Q6XE38 83 aa13.01□□□□□ -0.33
ATG4D-212ENST00000590096 BCE1O60756 84 aa13□□□□□ -0.33
ATG4D-212ENST00000590096 NPC2P61916 151 aa13□□□□□ -0.33
ATG4D-212ENST00000590096 DIRC1Q969H9 104 aa13□□□□□ -0.33
ATG4D-212ENST00000590096 LITAFQ99732 161 aa12.99□□□□□ -0.33
ATG4D-212ENST00000590096 ZNF861PO60384 105 aa12.97□□□□□ -0.33
ATG4D-212ENST00000590096 PCP2Q8IVA1 136 aa12.97□□□□□ -0.33
ATG4D-212ENST00000590096 TMEM238C9JI98 176 aa12.96□□□□□ -0.33
ATG4D-212ENST00000590096 RPL28P46779 137 aaKnown RBP12.96□□□□□ -0.33
ATG4D-212ENST00000590096 TMA7Q9Y2S6 64 aaKnown RBP12.96□□□□□ -0.33
ATG4D-212ENST00000590096 H0Y9J4 135 aa12.95□□□□□ -0.34
ATG4D-212ENST00000590096 NDUFC2O95298 119 aa12.95□□□□□ -0.34
ATG4D-212ENST00000590096 UBE2AP49459 152 aa12.95□□□□□ -0.34
ATG4D-212ENST00000590096 SOSTDC1Q6X4U4 206 aa12.95□□□□□ -0.34
ATG4D-212ENST00000590096 LINC00308Q8TCZ7 52 aa12.95□□□□□ -0.34
ATG4D-212ENST00000590096 TMEM126AQ9H061 195 aa12.95□□□□□ -0.34
ATG4D-212ENST00000590096 SPANXB1Q9NS25 103 aaPredicted RBP12.95□□□□□ -0.34
ATG4D-212ENST00000590096 TRBV10-2A0A0K0K1G8 114 aa12.94□□□□□ -0.34
ATG4D-212ENST00000590096 S100A12P80511 92 aa12.92□□□□□ -0.34
ATG4D-212ENST00000590096 FAM19A1Q7Z5A9 133 aa12.92□□□□□ -0.34
ATG4D-212ENST00000590096 SPANXDQ9BXN6 97 aa12.92□□□□□ -0.34
ATG4D-212ENST00000590096 SPANXCQ9NY87 97 aa12.92□□□□□ -0.34
ATG4D-212ENST00000590096 TRBV10-3A0A0K0K1G6 114 aa12.91□□□□□ -0.34
ATG4D-212ENST00000590096 PRYO14603 147 aa12.91□□□□□ -0.34
ATG4D-212ENST00000590096 EIF4EBP3O60516 100 aaPredicted RBP12.91□□□□□ -0.34
ATG4D-212ENST00000590096 COPS9Q8WXC6 57 aa12.91□□□□□ -0.34
ATG4D-212ENST00000590096 DDTP30046 118 aa12.9□□□□□ -0.34
ATG4D-212ENST00000590096 LINC01600Q96MT4 127 aa12.9□□□□□ -0.34
ATG4D-212ENST00000590096 S100A7L2Q5SY68 101 aa12.89□□□□□ -0.35
ATG4D-212ENST00000590096 Q6ZVH6 145 aa12.88□□□□□ -0.35
ATG4D-212ENST00000590096 KCNQ1DNQ9H478 68 aa12.88□□□□□ -0.35
ATG4D-212ENST00000590096 JOSD1Q15040 202 aaPredicted RBP12.87□□□□□ -0.35
ATG4D-212ENST00000590096 KRTAP13-1Q8IUC0 172 aa12.87□□□□□ -0.35
ATG4D-212ENST00000590096 IFITM1P13164 125 aa12.86□□□□□ -0.35
ATG4D-212ENST00000590096 PRLHP81277 87 aa12.86□□□□□ -0.35
ATG4D-212ENST00000590096 MT1HL1P0DM35 61 aa12.84□□□□□ -0.35
ATG4D-212ENST00000590096 ETDCA0A1B0GVM5 59 aa12.83□□□□□ -0.36
ATG4D-212ENST00000590096 IGLV6-57P01721 117 aa12.83□□□□□ -0.36
ATG4D-212ENST00000590096 LINC00337Q8N6G1 96 aa12.83□□□□□ -0.36
ATG4D-212ENST00000590096 VAMP8Q9BV40 100 aa12.83□□□□□ -0.36
ATG4D-212ENST00000590096 SPRR1AP35321 89 aa12.82□□□□□ -0.36
ATG4D-212ENST00000590096 LINC00518Q8N0U6 118 aa12.82□□□□□ -0.36
ATG4D-212ENST00000590096 PPDPFQ9H3Y8 114 aa12.82□□□□□ -0.36
ATG4D-212ENST00000590096 PAM16Q9Y3D7 125 aa12.82□□□□□ -0.36
ATG4D-212ENST00000590096 CBY1Q9Y3M2 126 aa12.82□□□□□ -0.36
ATG4D-212ENST00000590096 COX8AP10176 69 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 200.8 ms