RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 HSBP1L1C9JCN9 74 aa6.55□□□□□ -1.36
SDF2-208ENST00000589788 PRSS2P07478 247 aa6.55□□□□□ -1.36
SDF2-208ENST00000589788 RPL18AQ02543 176 aaKnown RBP6.55□□□□□ -1.36
SDF2-208ENST00000589788 C7orf33Q8WU49 177 aa6.55□□□□□ -1.36
SDF2-208ENST00000589788 VAMP8Q9BV40 100 aa6.55□□□□□ -1.36
SDF2-208ENST00000589788 IGLV5-39A0A0G2JS06 123 aa6.54□□□□□ -1.36
SDF2-208ENST00000589788 E9PLD3 99 aa6.54□□□□□ -1.36
SDF2-208ENST00000589788 SPINK8P0C7L1 97 aa6.54□□□□□ -1.36
SDF2-208ENST00000589788 SERTAD4-AS1Q5TG53 156 aa6.54□□□□□ -1.36
SDF2-208ENST00000589788 UNQ6190/PRO20217Q6UXQ8 127 aa6.54□□□□□ -1.36
SDF2-208ENST00000589788 TOMM7Q9P0U1 55 aa6.54□□□□□ -1.36
SDF2-208ENST00000589788 FLG2Q5D862 2391 aaPredicted RBP6.54□□□□□ -1.36
SDF2-208ENST00000589788 KRTAP10-4P60372 401 aaPredicted RBP6.53□□□□□ -1.36
SDF2-208ENST00000589788 CKS1BP61024 79 aa6.53□□□□□ -1.36
SDF2-208ENST00000589788 S100A12P80511 92 aa6.53□□□□□ -1.36
SDF2-208ENST00000589788 KIAA0087Q14695 138 aa6.53□□□□□ -1.36
SDF2-208ENST00000589788 C10orf25Q5T742 122 aa6.53□□□□□ -1.36
SDF2-208ENST00000589788 ABCA13Q86UQ4 5058 aa6.53□□□□□ -1.36
SDF2-208ENST00000589788 LEPROTO15243 131 aa6.52□□□□□ -1.37
SDF2-208ENST00000589788 C6orf226Q5I0X4 101 aa6.52□□□□□ -1.37
SDF2-208ENST00000589788 KRTAP5-3Q6L8H2 238 aa6.52□□□□□ -1.37
SDF2-208ENST00000589788 C2orf82Q6UX34 121 aa6.52□□□□□ -1.37
SDF2-208ENST00000589788 PLEKHB2Q96CS7 222 aa6.52□□□□□ -1.37
SDF2-208ENST00000589788 C12orf57Q99622 126 aa6.52□□□□□ -1.37
SDF2-208ENST00000589788 C6orf48Q9UBA6 75 aa6.52□□□□□ -1.37
SDF2-208ENST00000589788 PAM16Q9Y3D7 125 aa6.52□□□□□ -1.37
SDF2-208ENST00000589788 IGKV2D-26A0A0A0MRZ7 120 aa6.51□□□□□ -1.37
SDF2-208ENST00000589788 TRBV30A0A0K0K1B3 111 aa6.51□□□□□ -1.37
SDF2-208ENST00000589788 SPATA45Q537H7 98 aa6.51□□□□□ -1.37
SDF2-208ENST00000589788 Q8IZM0 81 aa6.51□□□□□ -1.37
SDF2-208ENST00000589788 LINC00518Q8N0U6 118 aa6.51□□□□□ -1.37
SDF2-208ENST00000589788 J3QQQ9 107 aa6.5□□□□□ -1.37
SDF2-208ENST00000589788 NMUP48645 174 aa6.5□□□□□ -1.37
SDF2-208ENST00000589788 TSPEAR-AS2P59090 65 aa6.5□□□□□ -1.37
SDF2-208ENST00000589788 COX7B2Q8TF08 81 aa6.5□□□□□ -1.37
SDF2-208ENST00000589788 KRTAP4-11Q9BYQ6 195 aa6.5□□□□□ -1.37
SDF2-208ENST00000589788 TLX1NBP0CAT3 122 aa6.5□□□□□ -1.37
SDF2-208ENST00000589788 LGALS3P17931 250 aaKnown RBP6.5□□□□□ -1.37
SDF2-208ENST00000589788 GAGE2EQ4V326 116 aa6.5□□□□□ -1.37
SDF2-208ENST00000589788 C9orf116Q5BN46 136 aaPredicted RBP6.5□□□□□ -1.37
SDF2-208ENST00000589788 GAGE2DQ9UEU5 116 aa6.5□□□□□ -1.37
SDF2-208ENST00000589788 DNAH8Q96JB1 4490 aa6.49□□□□□ -1.37
SDF2-208ENST00000589788 A0A1W2PNN7 141 aa6.49□□□□□ -1.37
SDF2-208ENST00000589788 CXCL5P42830 114 aa6.49□□□□□ -1.37
SDF2-208ENST00000589788 SFTA2Q6UW10 78 aa6.49□□□□□ -1.37
SDF2-208ENST00000589788 Q6ZRP5 223 aa6.49□□□□□ -1.37
SDF2-208ENST00000589788 FAT1Q14517 4588 aa6.48□□□□□ -1.37
SDF2-208ENST00000589788 NDUFC2-KCTD14E9PQ53 114 aa6.48□□□□□ -1.37
SDF2-208ENST00000589788 COX8AP10176 69 aa6.48□□□□□ -1.37
SDF2-208ENST00000589788 PCP2Q8IVA1 136 aa6.48□□□□□ -1.37
SDF2-208ENST00000589788 ZNF625Q96I27 306 aaPredicted RBP6.48□□□□□ -1.37
SDF2-208ENST00000589788 DMBT1Q9UGM3 2413 aaPredicted RBP6.47□□□□□ -1.37
SDF2-208ENST00000589788 MYMXA0A1B0GTQ4 84 aa6.47□□□□□ -1.37
SDF2-208ENST00000589788 ZNF815PA8K554 130 aa6.47□□□□□ -1.37
SDF2-208ENST00000589788 DLEU1O43261 78 aa6.47□□□□□ -1.37
SDF2-208ENST00000589788 HNRNPA3P51991 378 aaKnown RBP6.47□□□□□ -1.37
SDF2-208ENST00000589788 PRR3P79522 188 aaKnown RBP6.47□□□□□ -1.37
SDF2-208ENST00000589788 BOD1L2Q8IYS8 172 aa6.47□□□□□ -1.37
SDF2-208ENST00000589788 TTTY13Q9BZ97 58 aa6.47□□□□□ -1.37
SDF2-208ENST00000589788 NDUFA12Q9UI09 145 aa6.47□□□□□ -1.37
SDF2-208ENST00000589788 KRTAP29-1A8MX34 341 aaPredicted RBP6.46□□□□□ -1.38
SDF2-208ENST00000589788 HERV-K104P63124 156 aa6.46□□□□□ -1.38
SDF2-208ENST00000589788 FAM19A5Q7Z5A7 132 aaPredicted RBP6.46□□□□□ -1.38
SDF2-208ENST00000589788 C14orf144Q96I85 54 aa6.46□□□□□ -1.38
SDF2-208ENST00000589788 FAM168BA1KXE4 195 aa6.45□□□□□ -1.38
SDF2-208ENST00000589788 OXTP01178 125 aa6.45□□□□□ -1.38
SDF2-208ENST00000589788 SLC25A34Q6PIV7 304 aa6.45□□□□□ -1.38
SDF2-208ENST00000589788 VPS13BQ7Z7G8 4022 aa6.44□□□□□ -1.38
SDF2-208ENST00000589788 A0A0J9YXY3 114 aa6.44□□□□□ -1.38
SDF2-208ENST00000589788 PHF5AQ7RTV0 110 aaKnown RBP6.44□□□□□ -1.38
SDF2-208ENST00000589788 UQCR10Q9UDW1 63 aa6.44□□□□□ -1.38
SDF2-208ENST00000589788 TSTD3H0UI37 97 aa6.43□□□□□ -1.38
SDF2-208ENST00000589788 C9orf129Q5T035 196 aaKnown RBP6.43□□□□□ -1.38
SDF2-208ENST00000589788 SCGB1D4Q6XE38 83 aa6.43□□□□□ -1.38
SDF2-208ENST00000589788 PRO1933Q9H354 126 aa6.43□□□□□ -1.38
SDF2-208ENST00000589788 TP73-AS1Q9UF72 201 aa6.43□□□□□ -1.38
SDF2-208ENST00000589788 LINC00587B1AMM8 73 aa6.42□□□□□ -1.38
SDF2-208ENST00000589788 M0QXV9 152 aa6.42□□□□□ -1.38
SDF2-208ENST00000589788 LCE5AQ5TCM9 118 aa6.42□□□□□ -1.38
SDF2-208ENST00000589788 MIEN1Q9BRT3 115 aa6.42□□□□□ -1.38
SDF2-208ENST00000589788 XAGE1AQ9HD64 81 aa6.42□□□□□ -1.38
SDF2-208ENST00000589788 TIMM17BO60830 172 aa6.41□□□□□ -1.38
SDF2-208ENST00000589788 UBE2BP63146 152 aa6.41□□□□□ -1.38
SDF2-208ENST00000589788 COX17Q14061 63 aa6.41□□□□□ -1.38
SDF2-208ENST00000589788 MEIG1Q5JSS6 88 aa6.41□□□□□ -1.38
SDF2-208ENST00000589788 HIGD1BQ9P298 99 aa6.41□□□□□ -1.38
SDF2-208ENST00000589788 PSORS1C2Q9UIG4 136 aa6.41□□□□□ -1.38
SDF2-208ENST00000589788 ERG28Q9UKR5 140 aa6.41□□□□□ -1.38
SDF2-208ENST00000589788 TMEM238C9JI98 176 aa6.4□□□□□ -1.39
SDF2-208ENST00000589788 C1orf137Q5JT78 98 aa6.4□□□□□ -1.39
SDF2-208ENST00000589788 SPINK6Q6UWN8 80 aa6.4□□□□□ -1.39
SDF2-208ENST00000589788 C2orf91Q6ZV80 131 aa6.4□□□□□ -1.39
SDF2-208ENST00000589788 LITAFQ99732 161 aa6.4□□□□□ -1.39
SDF2-208ENST00000589788 SMIM13P0DJ93 91 aa6.39□□□□□ -1.39
SDF2-208ENST00000589788 KRTAP7-1Q8IUC3 87 aa6.39□□□□□ -1.39
SDF2-208ENST00000589788 SPANXB1Q9NS25 103 aaPredicted RBP6.39□□□□□ -1.39
SDF2-208ENST00000589788 PFN2P35080 140 aa6.38□□□□□ -1.39
SDF2-208ENST00000589788 REG3GQ6UW15 175 aa6.38□□□□□ -1.39
SDF2-208ENST00000589788 LINC00158P58513 81 aa6.37□□□□□ -1.39
SDF2-208ENST00000589788 SRSF9Q13242 221 aaKnown RBP eCLIP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms