RNA–Protein interactions for RNA: ENST00000589760.1

RFX1-206, Transcript of regulatory factor X1, humanhuman

TSL 5

Gene RFX1, Length 848 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-206ENST00000589760 HIST1H2BCP62807 126 aa8.98□□□□□ -0.97
RFX1-206ENST00000589760 HIST2H2BEQ16778 126 aa8.98□□□□□ -0.97
RFX1-206ENST00000589760 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.98□□□□□ -0.97
RFX1-206ENST00000589760 HIST1H2BHQ93079 126 aa8.98□□□□□ -0.97
RFX1-206ENST00000589760 HIST1H2BNQ99877 126 aa8.98□□□□□ -0.97
RFX1-206ENST00000589760 HIST1H2BMQ99879 126 aa8.98□□□□□ -0.97
RFX1-206ENST00000589760 TMEM223A0PJW6 202 aa8.97□□□□□ -0.97
RFX1-206ENST00000589760 GAGE10A6NGK3 116 aa8.97□□□□□ -0.97
RFX1-206ENST00000589760 FABP4P15090 132 aa8.97□□□□□ -0.97
RFX1-206ENST00000589760 XAGE1AQ9HD64 81 aa8.97□□□□□ -0.97
RFX1-206ENST00000589760 M0QXV9 152 aa8.96□□□□□ -0.98
RFX1-206ENST00000589760 SFTA2Q6UW10 78 aa8.96□□□□□ -0.98
RFX1-206ENST00000589760 KRTAP7-1Q8IUC3 87 aa8.96□□□□□ -0.98
RFX1-206ENST00000589760 OXTP01178 125 aa8.95□□□□□ -0.98
RFX1-206ENST00000589760 S100A1P23297 94 aa8.95□□□□□ -0.98
RFX1-206ENST00000589760 PSORS1C2Q9UIG4 136 aa8.95□□□□□ -0.98
RFX1-206ENST00000589760 PFN2P35080 140 aa8.93□□□□□ -0.98
RFX1-206ENST00000589760 UBE2BP63146 152 aa8.93□□□□□ -0.98
RFX1-206ENST00000589760 COX17Q14061 63 aa8.93□□□□□ -0.98
RFX1-206ENST00000589760 C1orf137Q5JT78 98 aa8.93□□□□□ -0.98
RFX1-206ENST00000589760 SERTAD4-AS1Q5TG53 156 aa8.93□□□□□ -0.98
RFX1-206ENST00000589760 MAP1LC3CQ9BXW4 147 aa8.93□□□□□ -0.98
RFX1-206ENST00000589760 ERG28Q9UKR5 140 aa8.93□□□□□ -0.98
RFX1-206ENST00000589760 MYCBP2O75592 4640 aa8.93□□□□□ -0.98
RFX1-206ENST00000589760 A0A0A0MQY5 61 aa8.92□□□□□ -0.98
RFX1-206ENST00000589760 SPINK6Q6UWN8 80 aa8.92□□□□□ -0.98
RFX1-206ENST00000589760 ZNF625Q96I27 306 aaPredicted RBP8.92□□□□□ -0.98
RFX1-206ENST00000589760 C22orf24Q9Y442 160 aa8.92□□□□□ -0.98
RFX1-206ENST00000589760 PLNP26678 52 aa8.91□□□□□ -0.98
RFX1-206ENST00000589760 DPM2O94777 84 aa8.9□□□□□ -0.98
RFX1-206ENST00000589760 SRSF9Q13242 221 aaKnown RBP eCLIP8.9□□□□□ -0.98
RFX1-206ENST00000589760 LBHQ53QV2 105 aaPredicted RBP8.9□□□□□ -0.98
RFX1-206ENST00000589760 KRTAP11-1Q8IUC1 163 aa8.9□□□□□ -0.98
RFX1-206ENST00000589760 TP73-AS1Q9UF72 201 aa8.9□□□□□ -0.98
RFX1-206ENST00000589760 FAT3Q8TDW7 4589 aa8.9□□□□□ -0.98
RFX1-206ENST00000589760 ATP6V1G1O75348 118 aa8.89□□□□□ -0.99
RFX1-206ENST00000589760 IGKCP01834 107 aa8.89□□□□□ -0.99
RFX1-206ENST00000589760 PMCHL2Q9BQD1 86 aa8.89□□□□□ -0.99
RFX1-206ENST00000589760 LRP1Q07954 4544 aaKnown RBP8.88□□□□□ -0.99
RFX1-206ENST00000589760 HERVK_113P61574 105 aa8.88□□□□□ -0.99
RFX1-206ENST00000589760 COA6Q5JTJ3 125 aaKnown RBP8.88□□□□□ -0.99
RFX1-206ENST00000589760 MRPL55Q7Z7F7 128 aaKnown RBP8.88□□□□□ -0.99
RFX1-206ENST00000589760 SYS1-DBNDD2H3BUS1 97 aa8.87□□□□□ -0.99
RFX1-206ENST00000589760 IGLV7-43P04211 117 aa8.87□□□□□ -0.99
RFX1-206ENST00000589760 LINC00158P58513 81 aa8.87□□□□□ -0.99
RFX1-206ENST00000589760 HERV-K104P63124 156 aa8.87□□□□□ -0.99
RFX1-206ENST00000589760 SND1-IT1Q9HBX3 110 aa8.87□□□□□ -0.99
RFX1-206ENST00000589760 DMBT1Q9UGM3 2413 aaPredicted RBP8.86□□□□□ -0.99
RFX1-206ENST00000589760 IGLV5-37A0A075B6J1 123 aa8.86□□□□□ -0.99
RFX1-206ENST00000589760 LEPROTO15243 131 aa8.86□□□□□ -0.99
RFX1-206ENST00000589760 MEIG1Q5JSS6 88 aa8.86□□□□□ -0.99
RFX1-206ENST00000589760 REG3GQ6UW15 175 aa8.86□□□□□ -0.99
RFX1-206ENST00000589760 NKAPP1Q8N9T2 125 aa8.86□□□□□ -0.99
RFX1-206ENST00000589760 MPLKIPQ8TAP9 179 aa8.86□□□□□ -0.99
RFX1-206ENST00000589760 PLEKHB2Q96CS7 222 aa8.86□□□□□ -0.99
RFX1-206ENST00000589760 MYMXA0A1B0GTQ4 84 aa8.85□□□□□ -0.99
RFX1-206ENST00000589760 LINC00587B1AMM8 73 aa8.85□□□□□ -0.99
RFX1-206ENST00000589760 LINC00167Q96N53 147 aa8.85□□□□□ -0.99
RFX1-206ENST00000589760 NDUFA12Q9UI09 145 aa8.85□□□□□ -0.99
RFX1-206ENST00000589760 A0A0U1RRA0 63 aa8.84□□□□□ -0.99
RFX1-206ENST00000589760 RPL24P83731 157 aaKnown RBP8.84□□□□□ -0.99
RFX1-206ENST00000589760 PET117Q6UWS5 81 aa8.84□□□□□ -0.99
RFX1-206ENST00000589760 J3QQQ9 107 aa8.83□□□□□ -1
RFX1-206ENST00000589760 SMIM13P0DJ93 91 aa8.83□□□□□ -1
RFX1-206ENST00000589760 RPL37AP8A6NKH3 93 aa8.82□□□□□ -1
RFX1-206ENST00000589760 LGALS3P17931 250 aaKnown RBP8.82□□□□□ -1
RFX1-206ENST00000589760 TSPEAR-AS2P59090 65 aa8.82□□□□□ -1
RFX1-206ENST00000589760 LINC01545Q5VT33 79 aa8.82□□□□□ -1
RFX1-206ENST00000589760 LINC01600Q96MT4 127 aa8.82□□□□□ -1
RFX1-206ENST00000589760 HERC1Q15751 4861 aa8.82□□□□□ -1
RFX1-206ENST00000589760 C3orf79P0CE67 100 aa8.81□□□□□ -1
RFX1-206ENST00000589760 VPREB1P12018 145 aa8.81□□□□□ -1
RFX1-206ENST00000589760 NMUP48645 174 aa8.81□□□□□ -1
RFX1-206ENST00000589760 DIRC1Q969H9 104 aa8.81□□□□□ -1
RFX1-206ENST00000589760 E9PLD3 99 aa8.8□□□□□ -1
RFX1-206ENST00000589760 MT1HL1P0DM35 61 aa8.8□□□□□ -1
RFX1-206ENST00000589760 MIR7-3HGQ8N6C7 128 aa8.8□□□□□ -1
RFX1-206ENST00000589760 KRTAP4-11Q9BYQ6 195 aa8.8□□□□□ -1
RFX1-206ENST00000589760 H0Y9J4 135 aa8.79□□□□□ -1
RFX1-206ENST00000589760 KRTDAPP60985 99 aa8.79□□□□□ -1
RFX1-206ENST00000589760 ZNF861PO60384 105 aa8.78□□□□□ -1
RFX1-206ENST00000589760 IGKV2-28A0A075B6P5 120 aa8.77□□□□□ -1.01
RFX1-206ENST00000589760 BCE1O60756 84 aa8.77□□□□□ -1.01
RFX1-206ENST00000589760 IGKV2D-28P01615 120 aa8.77□□□□□ -1.01
RFX1-206ENST00000589760 Q8NDZ9 215 aa8.77□□□□□ -1.01
RFX1-206ENST00000589760 IGLV1-50A0A075B6I6 118 aa8.76□□□□□ -1.01
RFX1-206ENST00000589760 BOD1L2Q8IYS8 172 aa8.76□□□□□ -1.01
RFX1-206ENST00000589760 C20orf202A1L168 122 aa8.75□□□□□ -1.01
RFX1-206ENST00000589760 RPL28P46779 137 aaKnown RBP8.75□□□□□ -1.01
RFX1-206ENST00000589760 TNXBP22105 4242 aa8.75□□□□□ -1.01
RFX1-206ENST00000589760 M0R378 163 aa8.74□□□□□ -1.01
RFX1-206ENST00000589760 S100A6P06703 90 aa8.74□□□□□ -1.01
RFX1-206ENST00000589760 LOC107984156A0A0G2JMH3 177 aa8.73□□□□□ -1.01
RFX1-206ENST00000589760 A0A0J9YXY3 114 aa8.73□□□□□ -1.01
RFX1-206ENST00000589760 S100A2P29034 98 aa8.73□□□□□ -1.01
RFX1-206ENST00000589760 KRTAP10-8P60410 259 aa8.73□□□□□ -1.01
RFX1-206ENST00000589760 ARL17AQ8IVW1 177 aa8.73□□□□□ -1.01
RFX1-206ENST00000589760 DAND5Q8N907 189 aa8.73□□□□□ -1.01
RFX1-206ENST00000589760 IGKV2D-26A0A0A0MRZ7 120 aa8.72□□□□□ -1.01
RFX1-206ENST00000589760 UBE2AP49459 152 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms