RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 SYCNQ0VAF6 134 aa3.75□□□□□ -1.81
VPS25-204ENST00000589577 MEIG1Q5JSS6 88 aa3.75□□□□□ -1.81
VPS25-204ENST00000589577 SCGB1D4Q6XE38 83 aa3.75□□□□□ -1.81
VPS25-204ENST00000589577 CARD19Q96LW7 228 aa3.75□□□□□ -1.81
VPS25-204ENST00000589577 KRTAP4-6Q9BYQ5 205 aa3.75□□□□□ -1.81
VPS25-204ENST00000589577 NDUFA12Q9UI09 145 aa3.75□□□□□ -1.81
VPS25-204ENST00000589577 IGLV5-39A0A0G2JS06 123 aa3.74□□□□□ -1.81
VPS25-204ENST00000589577 TRBV30A0A0K0K1B3 111 aa3.74□□□□□ -1.81
VPS25-204ENST00000589577 SMIM6P0DI80 62 aa3.74□□□□□ -1.81
VPS25-204ENST00000589577 PRR4Q16378 134 aa3.74□□□□□ -1.81
VPS25-204ENST00000589577 KRTAP26-1Q6PEX3 210 aa3.74□□□□□ -1.81
VPS25-204ENST00000589577 STPG4Q8N801 248 aa3.74□□□□□ -1.81
VPS25-204ENST00000589577 C15orf56Q8N910 161 aa3.74□□□□□ -1.81
VPS25-204ENST00000589577 C7orf33Q8WU49 177 aa3.74□□□□□ -1.81
VPS25-204ENST00000589577 COPS9Q8WXC6 57 aa3.74□□□□□ -1.81
VPS25-204ENST00000589577 MUC17Q685J3 4493 aa3.74□□□□□ -1.81
VPS25-204ENST00000589577 ZNF815PA8K554 130 aa3.73□□□□□ -1.81
VPS25-204ENST00000589577 SPATA45Q537H7 98 aa3.73□□□□□ -1.81
VPS25-204ENST00000589577 MIEN1Q9BRT3 115 aa3.73□□□□□ -1.81
VPS25-204ENST00000589577 PAM16Q9Y3D7 125 aa3.73□□□□□ -1.81
VPS25-204ENST00000589577 LOC107984640A0A0U1RRK4 108 aa3.72□□□□□ -1.81
VPS25-204ENST00000589577 TMEM238C9JI98 176 aa3.72□□□□□ -1.81
VPS25-204ENST00000589577 CNBPP62633 177 aaKnown RBP3.72□□□□□ -1.81
VPS25-204ENST00000589577 RPL18AQ02543 176 aaKnown RBP3.72□□□□□ -1.81
VPS25-204ENST00000589577 COX17Q14061 63 aa3.72□□□□□ -1.81
VPS25-204ENST00000589577 RNF151Q2KHN1 245 aa3.72□□□□□ -1.81
VPS25-204ENST00000589577 PYY3Q5JQD4 70 aa3.72□□□□□ -1.81
VPS25-204ENST00000589577 DPH3Q96FX2 82 aa3.72□□□□□ -1.81
VPS25-204ENST00000589577 LINC00474Q9P2X8 69 aa3.72□□□□□ -1.81
VPS25-204ENST00000589577 TSTD3H0UI37 97 aa3.71□□□□□ -1.82
VPS25-204ENST00000589577 SLPIP03973 132 aa3.71□□□□□ -1.82
VPS25-204ENST00000589577 LINC00158P58513 81 aa3.71□□□□□ -1.82
VPS25-204ENST00000589577 SLC25A34Q6PIV7 304 aa3.71□□□□□ -1.82
VPS25-204ENST00000589577 C2orf82Q6UX34 121 aa3.71□□□□□ -1.82
VPS25-204ENST00000589577 UNQ6190/PRO20217Q6UXQ8 127 aa3.71□□□□□ -1.82
VPS25-204ENST00000589577 PRR26Q8N8Z3 221 aa3.71□□□□□ -1.82
VPS25-204ENST00000589577 LINC00526Q96FQ7 95 aa3.71□□□□□ -1.82
VPS25-204ENST00000589577 ZNF625Q96I27 306 aaPredicted RBP3.71□□□□□ -1.82
VPS25-204ENST00000589577 ERG28Q9UKR5 140 aa3.71□□□□□ -1.82
VPS25-204ENST00000589577 NDUFC2-KCTD14E9PQ53 114 aa3.7□□□□□ -1.82
VPS25-204ENST00000589577 PFN2P35080 140 aa3.7□□□□□ -1.82
VPS25-204ENST00000589577 KIAA0087Q14695 138 aa3.7□□□□□ -1.82
VPS25-204ENST00000589577 ANKRD39Q53RE8 183 aa3.7□□□□□ -1.82
VPS25-204ENST00000589577 PSORS1C2Q9UIG4 136 aa3.7□□□□□ -1.82
VPS25-204ENST00000589577 A0A0U1RRA0 63 aa3.69□□□□□ -1.82
VPS25-204ENST00000589577 LOC105371267A0A1B0GV96 52 aa3.69□□□□□ -1.82
VPS25-204ENST00000589577 TIMM17BO60830 172 aa3.69□□□□□ -1.82
VPS25-204ENST00000589577 COX8AP10176 69 aa3.69□□□□□ -1.82
VPS25-204ENST00000589577 GAGE2BQ13066 116 aa3.69□□□□□ -1.82
VPS25-204ENST00000589577 GAGE2EQ4V326 116 aa3.69□□□□□ -1.82
VPS25-204ENST00000589577 Q6ZVH6 145 aa3.69□□□□□ -1.82
VPS25-204ENST00000589577 C12orf57Q99622 126 aa3.69□□□□□ -1.82
VPS25-204ENST00000589577 C6orf48Q9UBA6 75 aa3.69□□□□□ -1.82
VPS25-204ENST00000589577 UQCR10Q9UDW1 63 aa3.69□□□□□ -1.82
VPS25-204ENST00000589577 GAGE2DQ9UEU5 116 aa3.69□□□□□ -1.82
VPS25-204ENST00000589577 IGKV2D-26A0A0A0MRZ7 120 aa3.68□□□□□ -1.82
VPS25-204ENST00000589577 IGKV2-24A0A0C4DH68 120 aa3.68□□□□□ -1.82
VPS25-204ENST00000589577 A0A0J9YXY3 114 aa3.68□□□□□ -1.82
VPS25-204ENST00000589577 DLEU1O43261 78 aa3.68□□□□□ -1.82
VPS25-204ENST00000589577 TLX1NBP0CAT3 122 aa3.68□□□□□ -1.82
VPS25-204ENST00000589577 SMIM13P0DJ93 91 aa3.68□□□□□ -1.82
VPS25-204ENST00000589577 TSPEAR-AS2P59090 65 aa3.68□□□□□ -1.82
VPS25-204ENST00000589577 RPL24P83731 157 aaKnown RBP3.68□□□□□ -1.82
VPS25-204ENST00000589577 MAJINQ3KP22 176 aa3.68□□□□□ -1.82
VPS25-204ENST00000589577 PCP2Q8IVA1 136 aa3.68□□□□□ -1.82
VPS25-204ENST00000589577 NKAPP1Q8N9T2 125 aa3.68□□□□□ -1.82
VPS25-204ENST00000589577 C14orf144Q96I85 54 aa3.68□□□□□ -1.82
VPS25-204ENST00000589577 HIST1H4GQ99525 98 aa3.68□□□□□ -1.82
VPS25-204ENST00000589577 TMEM238LA0A1B0GVL6 79 aa3.67□□□□□ -1.82
VPS25-204ENST00000589577 A6NJY4 79 aa3.67□□□□□ -1.82
VPS25-204ENST00000589577 IFITM1P13164 125 aa3.67□□□□□ -1.82
VPS25-204ENST00000589577 C9orf116Q5BN46 136 aaPredicted RBP3.67□□□□□ -1.82
VPS25-204ENST00000589577 C10orf25Q5T742 122 aa3.67□□□□□ -1.82
VPS25-204ENST00000589577 BOD1L2Q8IYS8 172 aa3.67□□□□□ -1.82
VPS25-204ENST00000589577 MIR7-3HGQ8N6C7 128 aa3.67□□□□□ -1.82
VPS25-204ENST00000589577 CBY1Q9Y3M2 126 aa3.67□□□□□ -1.82
VPS25-204ENST00000589577 PTTG1IPP53801 180 aa3.66□□□□□ -1.82
VPS25-204ENST00000589577 Q6ZRP5 223 aa3.66□□□□□ -1.82
VPS25-204ENST00000589577 TTTY13Q9BZ97 58 aa3.66□□□□□ -1.82
VPS25-204ENST00000589577 XAGE1AQ9HD64 81 aa3.66□□□□□ -1.82
VPS25-204ENST00000589577 HIGD1BQ9P298 99 aa3.66□□□□□ -1.82
VPS25-204ENST00000589577 A0A096LNI7 61 aa3.65□□□□□ -1.83
VPS25-204ENST00000589577 LINC01547P58512 204 aaPredicted RBP3.65□□□□□ -1.83
VPS25-204ENST00000589577 TAL2Q16559 108 aa3.65□□□□□ -1.83
VPS25-204ENST00000589577 LBHQ53QV2 105 aaPredicted RBP3.65□□□□□ -1.83
VPS25-204ENST00000589577 LINC00518Q8N0U6 118 aa3.65□□□□□ -1.83
VPS25-204ENST00000589577 SPANXDQ9BXN6 97 aa3.65□□□□□ -1.83
VPS25-204ENST00000589577 SND1-IT1Q9HBX3 110 aa3.65□□□□□ -1.83
VPS25-204ENST00000589577 SPANXB1Q9NS25 103 aaPredicted RBP3.65□□□□□ -1.83
VPS25-204ENST00000589577 SPANXCQ9NY87 97 aa3.65□□□□□ -1.83
VPS25-204ENST00000589577 M0R143 59 aa3.64□□□□□ -1.83
VPS25-204ENST00000589577 KRTAP1-4P0C5Y4 121 aa3.64□□□□□ -1.83
VPS25-204ENST00000589577 NPC2P61916 151 aa3.64□□□□□ -1.83
VPS25-204ENST00000589577 UBE2BP63146 152 aa3.64□□□□□ -1.83
VPS25-204ENST00000589577 HSD52Q0P140 79 aa3.64□□□□□ -1.83
VPS25-204ENST00000589577 S100A7L2Q5SY68 101 aa3.64□□□□□ -1.83
VPS25-204ENST00000589577 FAM19A5Q7Z5A7 132 aaPredicted RBP3.64□□□□□ -1.83
VPS25-204ENST00000589577 DAND5Q8N907 189 aa3.64□□□□□ -1.83
VPS25-204ENST00000589577 LINC00308Q8TCZ7 52 aa3.64□□□□□ -1.83
VPS25-204ENST00000589577 PRO1933Q9H354 126 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms