RNA–Protein interactions for RNA: ENST00000589118.5

SF3A2-204, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-204ENST00000589118 C6orf226Q5I0X4 101 aa8.73□□□□□ -1.01
SF3A2-204ENST00000589118 PACRGQ96M98 296 aaPredicted RBP8.73□□□□□ -1.01
SF3A2-204ENST00000589118 IGLC3P0DOY3 106 aa8.72□□□□□ -1.01
SF3A2-204ENST00000589118 CKS1BP61024 79 aa8.72□□□□□ -1.01
SF3A2-204ENST00000589118 LCE2DQ5TA82 110 aaPredicted RBP8.72□□□□□ -1.01
SF3A2-204ENST00000589118 RPL37AP8A6NKH3 93 aa8.71□□□□□ -1.02
SF3A2-204ENST00000589118 FABP4P15090 132 aa8.71□□□□□ -1.02
SF3A2-204ENST00000589118 TOMM7Q9P0U1 55 aa8.71□□□□□ -1.02
SF3A2-204ENST00000589118 F8VRH5 84 aa8.7□□□□□ -1.02
SF3A2-204ENST00000589118 BCE1O60756 84 aa8.7□□□□□ -1.02
SF3A2-204ENST00000589118 S100A2P29034 98 aa8.7□□□□□ -1.02
SF3A2-204ENST00000589118 RPL28P46779 137 aaKnown RBP8.7□□□□□ -1.02
SF3A2-204ENST00000589118 TPRXLQ17RH7 258 aa8.7□□□□□ -1.02
SF3A2-204ENST00000589118 LINC00304Q8N9R0 145 aa8.7□□□□□ -1.02
SF3A2-204ENST00000589118 KRTAP4-1Q9BYQ7 146 aa8.7□□□□□ -1.02
SF3A2-204ENST00000589118 GAGE10A6NGK3 116 aa8.69□□□□□ -1.02
SF3A2-204ENST00000589118 COX7B2Q8TF08 81 aa8.69□□□□□ -1.02
SF3A2-204ENST00000589118 MAP1LC3CQ9BXW4 147 aa8.69□□□□□ -1.02
SF3A2-204ENST00000589118 TRAV12-1A0A0B4J245 112 aa8.68□□□□□ -1.02
SF3A2-204ENST00000589118 IGLV5-39A0A0G2JS06 123 aa8.68□□□□□ -1.02
SF3A2-204ENST00000589118 H3BRM9 83 aa8.68□□□□□ -1.02
SF3A2-204ENST00000589118 LBHQ53QV2 105 aaPredicted RBP8.68□□□□□ -1.02
SF3A2-204ENST00000589118 LINC00167Q96N53 147 aa8.68□□□□□ -1.02
SF3A2-204ENST00000589118 H0Y8G0 127 aa8.67□□□□□ -1.02
SF3A2-204ENST00000589118 ZNF22P17026 224 aaPredicted RBP8.67□□□□□ -1.02
SF3A2-204ENST00000589118 MRPL55Q7Z7F7 128 aaKnown RBP8.67□□□□□ -1.02
SF3A2-204ENST00000589118 HIST3H2BBQ8N257 126 aa8.67□□□□□ -1.02
SF3A2-204ENST00000589118 SPINK8P0C7L1 97 aa8.66□□□□□ -1.02
SF3A2-204ENST00000589118 PPDPFQ9H3Y8 114 aa8.66□□□□□ -1.02
SF3A2-204ENST00000589118 TMA7Q9Y2S6 64 aaKnown RBP8.66□□□□□ -1.02
SF3A2-204ENST00000589118 CHTOPQ9Y3Y2 248 aaKnown RBP8.66□□□□□ -1.02
SF3A2-204ENST00000589118 SNRPEP62304 92 aaKnown RBP8.65□□□□□ -1.02
SF3A2-204ENST00000589118 C20orf202A1L168 122 aa8.63□□□□□ -1.03
SF3A2-204ENST00000589118 C5orf52A6NGY3 159 aa8.63□□□□□ -1.03
SF3A2-204ENST00000589118 C11orf86A6NJI1 115 aa8.63□□□□□ -1.03
SF3A2-204ENST00000589118 SYS1-DBNDD2H3BUS1 97 aa8.63□□□□□ -1.03
SF3A2-204ENST00000589118 LINC01547P58512 204 aaPredicted RBP8.63□□□□□ -1.03
SF3A2-204ENST00000589118 KRTDAPP60985 99 aa8.63□□□□□ -1.03
SF3A2-204ENST00000589118 KRTAP13-1Q8IUC0 172 aa8.63□□□□□ -1.03
SF3A2-204ENST00000589118 HIST1H2BLQ99880 126 aa8.63□□□□□ -1.03
SF3A2-204ENST00000589118 PLNP26678 52 aa8.62□□□□□ -1.03
SF3A2-204ENST00000589118 PET117Q6UWS5 81 aa8.62□□□□□ -1.03
SF3A2-204ENST00000589118 C3orf22Q8N5N4 141 aa8.62□□□□□ -1.03
SF3A2-204ENST00000589118 DPM2O94777 84 aa8.61□□□□□ -1.03
SF3A2-204ENST00000589118 UBE2AP49459 152 aa8.61□□□□□ -1.03
SF3A2-204ENST00000589118 SFTA2Q6UW10 78 aa8.61□□□□□ -1.03
SF3A2-204ENST00000589118 TP73-AS1Q9UF72 201 aa8.61□□□□□ -1.03
SF3A2-204ENST00000589118 IGKV2D-26A0A0A0MRZ7 120 aa8.6□□□□□ -1.03
SF3A2-204ENST00000589118 C3orf79P0CE67 100 aa8.6□□□□□ -1.03
SF3A2-204ENST00000589118 C4orf48Q5BLP8 95 aa8.6□□□□□ -1.03
SF3A2-204ENST00000589118 TMEM170BQ5T4T1 132 aa8.6□□□□□ -1.03
SF3A2-204ENST00000589118 AKR1D1P51857 326 aa8.59□□□□□ -1.03
SF3A2-204ENST00000589118 PRLHP81277 87 aa8.59□□□□□ -1.03
SF3A2-204ENST00000589118 FAM229BQ4G0N7 80 aa8.59□□□□□ -1.03
SF3A2-204ENST00000589118 TMEM223A0PJW6 202 aa8.58□□□□□ -1.04
SF3A2-204ENST00000589118 IGKCP01834 107 aa8.58□□□□□ -1.04
SF3A2-204ENST00000589118 COX17Q14061 63 aa8.58□□□□□ -1.04
SF3A2-204ENST00000589118 LINC01545Q5VT33 79 aa8.58□□□□□ -1.04
SF3A2-204ENST00000589118 PMCHL2Q9BQD1 86 aa8.58□□□□□ -1.04
SF3A2-204ENST00000589118 IGLV5-37A0A075B6J1 123 aa8.57□□□□□ -1.04
SF3A2-204ENST00000589118 IGKV2-28A0A075B6P5 120 aa8.57□□□□□ -1.04
SF3A2-204ENST00000589118 IGKV2D-28P01615 120 aa8.57□□□□□ -1.04
SF3A2-204ENST00000589118 HERVK_113P61574 105 aa8.57□□□□□ -1.04
SF3A2-204ENST00000589118 ZNF625Q96I27 306 aaPredicted RBP8.57□□□□□ -1.04
SF3A2-204ENST00000589118 ASB16-AS1Q495Z4 193 aa8.55□□□□□ -1.04
SF3A2-204ENST00000589118 ERG28Q9UKR5 140 aa8.55□□□□□ -1.04
SF3A2-204ENST00000589118 KRTAP13-3Q3SY46 172 aa8.54□□□□□ -1.04
SF3A2-204ENST00000589118 LINC00337Q8N6G1 96 aa8.54□□□□□ -1.04
SF3A2-204ENST00000589118 TMEM238C9JI98 176 aa8.53□□□□□ -1.04
SF3A2-204ENST00000589118 PFN2P35080 140 aa8.52□□□□□ -1.05
SF3A2-204ENST00000589118 FAM19A1Q7Z5A9 133 aa8.52□□□□□ -1.05
SF3A2-204ENST00000589118 KRTAP3-3Q9BYR6 98 aa8.52□□□□□ -1.05
SF3A2-204ENST00000589118 KRTAP3-2Q9BYR7 98 aa8.52□□□□□ -1.05
SF3A2-204ENST00000589118 LCE2CQ5TA81 110 aa8.51□□□□□ -1.05
SF3A2-204ENST00000589118 NKAPP1Q8N9T2 125 aa8.51□□□□□ -1.05
SF3A2-204ENST00000589118 SND1-IT1Q9HBX3 110 aa8.51□□□□□ -1.05
SF3A2-204ENST00000589118 SCGB1D1O95968 90 aa8.5□□□□□ -1.05
SF3A2-204ENST00000589118 DAND5Q8N907 189 aa8.5□□□□□ -1.05
SF3A2-204ENST00000589118 PLEKHB2Q96CS7 222 aa8.5□□□□□ -1.05
SF3A2-204ENST00000589118 HSBP1L1C9JCN9 74 aa8.49□□□□□ -1.05
SF3A2-204ENST00000589118 VPREB1P12018 145 aa8.49□□□□□ -1.05
SF3A2-204ENST00000589118 HERV-K104P63124 156 aa8.49□□□□□ -1.05
SF3A2-204ENST00000589118 LEPROTO15243 131 aa8.48□□□□□ -1.05
SF3A2-204ENST00000589118 LGALS3P17931 250 aaKnown RBP8.48□□□□□ -1.05
SF3A2-204ENST00000589118 ATOH7Q8N100 152 aa8.48□□□□□ -1.05
SF3A2-204ENST00000589118 TMEM126AQ9H061 195 aa8.48□□□□□ -1.05
SF3A2-204ENST00000589118 E9PLD3 99 aa8.47□□□□□ -1.05
SF3A2-204ENST00000589118 LINC00587B1AMM8 73 aa8.46□□□□□ -1.06
SF3A2-204ENST00000589118 J3QQQ9 107 aa8.46□□□□□ -1.06
SF3A2-204ENST00000589118 M0R378 163 aa8.46□□□□□ -1.06
SF3A2-204ENST00000589118 RPL24P83731 157 aaKnown RBP8.46□□□□□ -1.06
SF3A2-204ENST00000589118 NDUFA12Q9UI09 145 aa8.46□□□□□ -1.06
SF3A2-204ENST00000589118 NMUP48645 174 aa8.45□□□□□ -1.06
SF3A2-204ENST00000589118 LINC00158P58513 81 aa8.45□□□□□ -1.06
SF3A2-204ENST00000589118 FP248Q71RG6 208 aaPredicted RBP8.45□□□□□ -1.06
SF3A2-204ENST00000589118 Q8NDZ9 215 aa8.45□□□□□ -1.06
SF3A2-204ENST00000589118 HIGD2AQ9BW72 106 aa8.45□□□□□ -1.06
SF3A2-204ENST00000589118 MYMXA0A1B0GTQ4 84 aa8.44□□□□□ -1.06
SF3A2-204ENST00000589118 TSPEAR-AS2P59090 65 aa8.44□□□□□ -1.06
SF3A2-204ENST00000589118 JOSD1Q15040 202 aaPredicted RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms