RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 MIR7-3HGQ8N6C7 128 aa12.3□□□□□ -0.44
CIRBP-220ENST00000588917 INAFM2P0DMQ5 153 aa12.29□□□□□ -0.44
CIRBP-220ENST00000588917 LBHQ53QV2 105 aaPredicted RBP12.29□□□□□ -0.44
CIRBP-220ENST00000588917 TIMM17BO60830 172 aa12.28□□□□□ -0.44
CIRBP-220ENST00000588917 PLA2G1BP04054 148 aaKnown RBP12.28□□□□□ -0.44
CIRBP-220ENST00000588917 DMBT1Q9UGM3 2413 aaPredicted RBP12.28□□□□□ -0.44
CIRBP-220ENST00000588917 SCGB1D4Q6XE38 83 aa12.27□□□□□ -0.45
CIRBP-220ENST00000588917 TP73-AS1Q9UF72 201 aa12.27□□□□□ -0.45
CIRBP-220ENST00000588917 M0QXV9 152 aa12.26□□□□□ -0.45
CIRBP-220ENST00000588917 C22orf24Q9Y442 160 aa12.26□□□□□ -0.45
CIRBP-220ENST00000588917 IGLV5-37A0A075B6J1 123 aa12.25□□□□□ -0.45
CIRBP-220ENST00000588917 SERTAD4-AS1Q5TG53 156 aa12.25□□□□□ -0.45
CIRBP-220ENST00000588917 PCP2Q8IVA1 136 aa12.25□□□□□ -0.45
CIRBP-220ENST00000588917 NKAPP1Q8N9T2 125 aa12.25□□□□□ -0.45
CIRBP-220ENST00000588917 MIEN1Q9BRT3 115 aa12.25□□□□□ -0.45
CIRBP-220ENST00000588917 TTTY13Q9BZ97 58 aa12.25□□□□□ -0.45
CIRBP-220ENST00000588917 LOC107984156A0A0G2JMH3 177 aa12.24□□□□□ -0.45
CIRBP-220ENST00000588917 Q5VSD8 79 aa12.24□□□□□ -0.45
CIRBP-220ENST00000588917 PHF5AQ7RTV0 110 aaKnown RBP12.24□□□□□ -0.45
CIRBP-220ENST00000588917 KRTAP7-1Q8IUC3 87 aa12.24□□□□□ -0.45
CIRBP-220ENST00000588917 ARL17AQ8IVW1 177 aa12.24□□□□□ -0.45
CIRBP-220ENST00000588917 VAMP8Q9BV40 100 aa12.24□□□□□ -0.45
CIRBP-220ENST00000588917 TMEM238C9JI98 176 aa12.23□□□□□ -0.45
CIRBP-220ENST00000588917 RPL37AP61513 92 aaKnown RBP12.22□□□□□ -0.45
CIRBP-220ENST00000588917 MRPL55Q7Z7F7 128 aaKnown RBP12.22□□□□□ -0.45
CIRBP-220ENST00000588917 BOD1L2Q8IYS8 172 aa12.22□□□□□ -0.45
CIRBP-220ENST00000588917 FAT1Q14517 4588 aa12.21□□□□□ -0.45
CIRBP-220ENST00000588917 UBE2BP63146 152 aa12.21□□□□□ -0.45
CIRBP-220ENST00000588917 PYY3Q5JQD4 70 aa12.21□□□□□ -0.45
CIRBP-220ENST00000588917 ADAMTSL4-AS1Q5T5F5 129 aa12.21□□□□□ -0.45
CIRBP-220ENST00000588917 Q6ZVH6 145 aa12.21□□□□□ -0.45
CIRBP-220ENST00000588917 DAND5Q8N907 189 aa12.21□□□□□ -0.45
CIRBP-220ENST00000588917 COPS9Q8WXC6 57 aa12.21□□□□□ -0.45
CIRBP-220ENST00000588917 VPREB1P12018 145 aa12.2□□□□□ -0.46
CIRBP-220ENST00000588917 SRRM2Q9UQ35 2752 aaKnown RBP12.19□□□□□ -0.46
CIRBP-220ENST00000588917 SPATA45Q537H7 98 aa12.19□□□□□ -0.46
CIRBP-220ENST00000588917 LITAFQ99732 161 aa12.19□□□□□ -0.46
CIRBP-220ENST00000588917 PAM16Q9Y3D7 125 aa12.19□□□□□ -0.46
CIRBP-220ENST00000588917 DLEU1O43261 78 aa12.18□□□□□ -0.46
CIRBP-220ENST00000588917 COX8AP10176 69 aa12.18□□□□□ -0.46
CIRBP-220ENST00000588917 NDUFC2O95298 119 aa12.17□□□□□ -0.46
CIRBP-220ENST00000588917 LINC00167Q96N53 147 aa12.17□□□□□ -0.46
CIRBP-220ENST00000588917 SPANXDQ9BXN6 97 aa12.17□□□□□ -0.46
CIRBP-220ENST00000588917 SPANXCQ9NY87 97 aa12.17□□□□□ -0.46
CIRBP-220ENST00000588917 M0R378 163 aa12.16□□□□□ -0.46
CIRBP-220ENST00000588917 IFITM1P13164 125 aa12.16□□□□□ -0.46
CIRBP-220ENST00000588917 LINC00308Q8TCZ7 52 aa12.16□□□□□ -0.46
CIRBP-220ENST00000588917 S100A12P80511 92 aa12.14□□□□□ -0.47
CIRBP-220ENST00000588917 PPDPFQ9H3Y8 114 aa12.14□□□□□ -0.47
CIRBP-220ENST00000588917 PSORS1C2Q9UIG4 136 aa12.14□□□□□ -0.47
CIRBP-220ENST00000588917 FLG2Q5D862 2391 aaPredicted RBP12.14□□□□□ -0.47
CIRBP-220ENST00000588917 MYCBP2O75592 4640 aa12.14□□□□□ -0.47
CIRBP-220ENST00000588917 TRBV10-2A0A0K0K1G8 114 aa12.13□□□□□ -0.47
CIRBP-220ENST00000588917 NPC2P61916 151 aa12.13□□□□□ -0.47
CIRBP-220ENST00000588917 PRR3P79522 188 aaKnown RBP12.13□□□□□ -0.47
CIRBP-220ENST00000588917 SRSF9Q13242 221 aaKnown RBP eCLIP12.13□□□□□ -0.473e-7■■□□□ 13.7
CIRBP-220ENST00000588917 C14orf144Q96I85 54 aa12.13□□□□□ -0.47
CIRBP-220ENST00000588917 VPS13BQ7Z7G8 4022 aa12.13□□□□□ -0.47
CIRBP-220ENST00000588917 GAGE10A6NGK3 116 aa12.12□□□□□ -0.47
CIRBP-220ENST00000588917 SLC25A34Q6PIV7 304 aa12.12□□□□□ -0.47
CIRBP-220ENST00000588917 Q8NDZ9 215 aa12.12□□□□□ -0.47
CIRBP-220ENST00000588917 SPANXB1Q9NS25 103 aaPredicted RBP12.12□□□□□ -0.47
CIRBP-220ENST00000588917 IGLV1-50A0A075B6I6 118 aa12.11□□□□□ -0.47
CIRBP-220ENST00000588917 RPL37AP8A6NKH3 93 aa12.11□□□□□ -0.47
CIRBP-220ENST00000588917 C1orf137Q5JT78 98 aa12.11□□□□□ -0.47
CIRBP-220ENST00000588917 SOSTDC1Q6X4U4 206 aa12.11□□□□□ -0.47
CIRBP-220ENST00000588917 KRTAP10-4P60372 401 aaPredicted RBP12.1□□□□□ -0.47
CIRBP-220ENST00000588917 LINC00518Q8N0U6 118 aa12.1□□□□□ -0.47
CIRBP-220ENST00000588917 NCR3O14931 201 aa12.08□□□□□ -0.48
CIRBP-220ENST00000588917 KRTAP11-1Q8IUC1 163 aa12.08□□□□□ -0.48
CIRBP-220ENST00000588917 MUSTN1Q8IVN3 82 aa12.08□□□□□ -0.48
CIRBP-220ENST00000588917 IGKV2-28A0A075B6P5 120 aa12.07□□□□□ -0.48
CIRBP-220ENST00000588917 EIF4EBP3O60516 100 aaPredicted RBP12.07□□□□□ -0.48
CIRBP-220ENST00000588917 IGKV2D-28P01615 120 aa12.07□□□□□ -0.48
CIRBP-220ENST00000588917 HIGD1BQ9P298 99 aa12.07□□□□□ -0.48
CIRBP-220ENST00000588917 S100A7L2Q5SY68 101 aa12.06□□□□□ -0.48
CIRBP-220ENST00000588917 CBY1Q9Y3M2 126 aa12.06□□□□□ -0.48
CIRBP-220ENST00000588917 HIST1H4GQ99525 98 aa12.05□□□□□ -0.48
CIRBP-220ENST00000588917 BCE1O60756 84 aa12.04□□□□□ -0.48
CIRBP-220ENST00000588917 IGLV7-43P04211 117 aa12.04□□□□□ -0.48
CIRBP-220ENST00000588917 SMIM6P0DI80 62 aa12.04□□□□□ -0.48
CIRBP-220ENST00000588917 DDTP30046 118 aa12.04□□□□□ -0.48
CIRBP-220ENST00000588917 REG3GQ6UW15 175 aa12.03□□□□□ -0.48
CIRBP-220ENST00000588917 SPINK6Q6UWN8 80 aa12.03□□□□□ -0.48
CIRBP-220ENST00000588917 TRBV10-3A0A0K0K1G6 114 aa12.02□□□□□ -0.49
CIRBP-220ENST00000588917 LOC105371267A0A1B0GV96 52 aa12.02□□□□□ -0.49
CIRBP-220ENST00000588917 J3QL48 77 aa12.02□□□□□ -0.49
CIRBP-220ENST00000588917 TMEM126AQ9H061 195 aa12.02□□□□□ -0.49
CIRBP-220ENST00000588917 KCNQ1DNQ9H478 68 aa12.02□□□□□ -0.49
CIRBP-220ENST00000588917 PRYO14603 147 aa12.01□□□□□ -0.49
CIRBP-220ENST00000588917 IGLV6-57P01721 117 aa12□□□□□ -0.49
CIRBP-220ENST00000588917 OR13C6PQ8NH95 151 aa12□□□□□ -0.49
CIRBP-220ENST00000588917 ZNF861PO60384 105 aa11.99□□□□□ -0.49
CIRBP-220ENST00000588917 RPL28P46779 137 aaKnown RBP11.99□□□□□ -0.49
CIRBP-220ENST00000588917 UQCR10Q9UDW1 63 aa11.99□□□□□ -0.49
CIRBP-220ENST00000588917 TAL2Q16559 108 aa11.98□□□□□ -0.49
CIRBP-220ENST00000588917 TRAV13-2A0A0B4J235 113 aa11.97□□□□□ -0.49
CIRBP-220ENST00000588917 UBE2AP49459 152 aa11.97□□□□□ -0.49
CIRBP-220ENST00000588917 C2orf91Q6ZV80 131 aa11.97□□□□□ -0.49
CIRBP-220ENST00000588917 DIRC1Q969H9 104 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 140 ms