RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-208ENST00000588009 PKD1P98161 4303 aa1.77□□□□□ -2.13
TUBD1-208ENST00000588009 TNCP24821 2201 aa1.77□□□□□ -2.13
TUBD1-208ENST00000588009 TRAV2A0A0B4J234 112 aa1.77□□□□□ -2.13
TUBD1-208ENST00000588009 TFF1P04155 84 aa1.77□□□□□ -2.13
TUBD1-208ENST00000588009 PIRTP0C851 137 aa1.77□□□□□ -2.13
TUBD1-208ENST00000588009 SLC25A6P12236 298 aa1.77□□□□□ -2.13
TUBD1-208ENST00000588009 OR2T2Q6IF00 324 aa1.77□□□□□ -2.13
TUBD1-208ENST00000588009 LINC00299Q6ZSB3 139 aa1.77□□□□□ -2.13
TUBD1-208ENST00000588009 NDUFA12Q9UI09 145 aa1.77□□□□□ -2.13
TUBD1-208ENST00000588009 FAT3Q8TDW7 4589 aa1.77□□□□□ -2.13
TUBD1-208ENST00000588009 DNAH2Q9P225 4427 aa1.77□□□□□ -2.13
TUBD1-208ENST00000588009 LRP1Q07954 4544 aaKnown RBP1.77□□□□□ -2.13
TUBD1-208ENST00000588009 TCHHQ07283 1943 aa1.76□□□□□ -2.13
TUBD1-208ENST00000588009 TMEM30CPA0ZSE6 113 aa1.76□□□□□ -2.13
TUBD1-208ENST00000588009 NUPR2A6NF83 97 aa1.76□□□□□ -2.13
TUBD1-208ENST00000588009 PDE6GP18545 87 aa1.76□□□□□ -2.13
TUBD1-208ENST00000588009 POLR2JP52435 117 aaKnown RBP1.76□□□□□ -2.13
TUBD1-208ENST00000588009 WFDC10AQ9H1F0 79 aa1.76□□□□□ -2.13
TUBD1-208ENST00000588009 TMEM242Q9NWH2 141 aa1.76□□□□□ -2.13
TUBD1-208ENST00000588009 IGHV3-30P01768 117 aa1.75□□□□□ -2.13
TUBD1-208ENST00000588009 IL5P05113 134 aa1.75□□□□□ -2.13
TUBD1-208ENST00000588009 IGHV3-30-5P0DP03 117 aa1.75□□□□□ -2.13
TUBD1-208ENST00000588009 MRPS10P82664 201 aaKnown RBP1.75□□□□□ -2.13
TUBD1-208ENST00000588009 PPDPFLQ8WWR9 84 aa1.75□□□□□ -2.13
TUBD1-208ENST00000588009 BPESC1Q9GZL8 116 aa1.75□□□□□ -2.13
TUBD1-208ENST00000588009 NAA60Q9H7X0 242 aa1.75□□□□□ -2.13
TUBD1-208ENST00000588009 SERP1Q9Y6X1 66 aa1.75□□□□□ -2.13
TUBD1-208ENST00000588009 DOCK11Q5JSL3 2073 aa1.75□□□□□ -2.13
TUBD1-208ENST00000588009 KMT2DO14686 5537 aa1.74□□□□□ -2.13
TUBD1-208ENST00000588009 SNAPC5O75971 98 aa1.74□□□□□ -2.13
TUBD1-208ENST00000588009 GNG4P50150 75 aa1.74□□□□□ -2.13
TUBD1-208ENST00000588009 IQCJQ1A5X6 159 aa1.74□□□□□ -2.13
TUBD1-208ENST00000588009 TCEAL7Q9BRU2 100 aa1.74□□□□□ -2.13
TUBD1-208ENST00000588009 MRPL36Q9P0J6 103 aaKnown RBP1.74□□□□□ -2.13
TUBD1-208ENST00000588009 VPS13BQ7Z7G8 4022 aa1.74□□□□□ -2.13
TUBD1-208ENST00000588009 ANKRD36A6QL64 1941 aa1.74□□□□□ -2.13
TUBD1-208ENST00000588009 LRP1BQ9NZR2 4599 aa1.73□□□□□ -2.13
TUBD1-208ENST00000588009 MCRIP1C9JLW8 97 aa1.73□□□□□ -2.13
TUBD1-208ENST00000588009 GYPBP06028 91 aa1.73□□□□□ -2.13
TUBD1-208ENST00000588009 Q56UQ5 140 aa1.73□□□□□ -2.13
TUBD1-208ENST00000588009 SPANXN1Q5VSR9 72 aa1.73□□□□□ -2.13
TUBD1-208ENST00000588009 Q6AWC8 147 aa1.73□□□□□ -2.13
TUBD1-208ENST00000588009 UNQ5815/PRO19632Q6UWF5 114 aa1.73□□□□□ -2.13
TUBD1-208ENST00000588009 SPTSSAQ969W0 71 aa1.73□□□□□ -2.13
TUBD1-208ENST00000588009 COA4Q9NYJ1 87 aa1.73□□□□□ -2.13
TUBD1-208ENST00000588009 FCGBPQ9Y6R7 5405 aaPredicted RBP1.73□□□□□ -2.13
TUBD1-208ENST00000588009 SNRNP200O75643 2136 aaKnown RBP1.72□□□□□ -2.13
TUBD1-208ENST00000588009 TRAV23DV6A0A075B6W5 121 aa1.72□□□□□ -2.13
TUBD1-208ENST00000588009 C20orf202A1L168 122 aa1.72□□□□□ -2.13
TUBD1-208ENST00000588009 NDUFB6O95139 128 aa1.72□□□□□ -2.13
TUBD1-208ENST00000588009 SMR3BP02814 79 aaPredicted RBP1.72□□□□□ -2.13
TUBD1-208ENST00000588009 EFNA4P52798 201 aa1.72□□□□□ -2.13
TUBD1-208ENST00000588009 PPP3R1P63098 170 aa1.72□□□□□ -2.13
TUBD1-208ENST00000588009 DCDP81605 110 aaKnown RBP1.72□□□□□ -2.13
TUBD1-208ENST00000588009 COPS9Q8WXC6 57 aa1.72□□□□□ -2.13
TUBD1-208ENST00000588009 TRBV10-1A0A0K0K1A3 114 aa1.71□□□□□ -2.14
TUBD1-208ENST00000588009 KRTAP2-3P0C7H8 128 aa1.71□□□□□ -2.14
TUBD1-208ENST00000588009 RBP2P50120 134 aa1.71□□□□□ -2.14
TUBD1-208ENST00000588009 KRTAP10-4P60372 401 aaPredicted RBP1.71□□□□□ -2.14
TUBD1-208ENST00000588009 CATR1Q13166 79 aa1.71□□□□□ -2.14
TUBD1-208ENST00000588009 WFDC9Q8NEX5 89 aa1.71□□□□□ -2.14
TUBD1-208ENST00000588009 DMAC1Q96GE9 116 aa1.71□□□□□ -2.14
TUBD1-208ENST00000588009 TMEM141Q96I45 108 aa1.71□□□□□ -2.14
TUBD1-208ENST00000588009 AMELYQ99218 206 aa1.71□□□□□ -2.14
TUBD1-208ENST00000588009 KRTAP2-4Q9BYR9 128 aa1.71□□□□□ -2.14
TUBD1-208ENST00000588009 FAIMQ9NVQ4 179 aa1.71□□□□□ -2.14
TUBD1-208ENST00000588009 DNAH17Q9UFH2 4485 aa1.71□□□□□ -2.14
TUBD1-208ENST00000588009 USH2AO75445 5202 aa1.7□□□□□ -2.14
TUBD1-208ENST00000588009 OOSP1A8MZH6 123 aa1.7□□□□□ -2.14
TUBD1-208ENST00000588009 SMIM6P0DI80 62 aa1.7□□□□□ -2.14
TUBD1-208ENST00000588009 TPPP2P59282 170 aa1.7□□□□□ -2.14
TUBD1-208ENST00000588009 UBE2G1P62253 170 aa1.7□□□□□ -2.14
TUBD1-208ENST00000588009 SPATA45Q537H7 98 aa1.7□□□□□ -2.14
TUBD1-208ENST00000588009 SLC48A1Q6P1K1 146 aa1.7□□□□□ -2.14
TUBD1-208ENST00000588009 Q8N8P6 123 aa1.7□□□□□ -2.14
TUBD1-208ENST00000588009 TSKUQ8WUA8 353 aa1.7□□□□□ -2.14
TUBD1-208ENST00000588009 ATG5Q9H1Y0 275 aa1.7□□□□□ -2.14
TUBD1-208ENST00000588009 IER3IP1Q9Y5U9 82 aa1.7□□□□□ -2.14
TUBD1-208ENST00000588009 DNAH5Q8TE73 4624 aa1.7□□□□□ -2.14
TUBD1-208ENST00000588009 NCR3O14931 201 aa1.69□□□□□ -2.14
TUBD1-208ENST00000588009 SNCGO76070 127 aa1.69□□□□□ -2.14
TUBD1-208ENST00000588009 PIPP12273 146 aaPredicted RBP1.69□□□□□ -2.14
TUBD1-208ENST00000588009 RPL37AP61513 92 aaKnown RBP1.69□□□□□ -2.14
TUBD1-208ENST00000588009 C9orf116Q5BN46 136 aaPredicted RBP1.69□□□□□ -2.14
TUBD1-208ENST00000588009 S100A7L2Q5SY68 101 aa1.69□□□□□ -2.14
TUBD1-208ENST00000588009 MRPL54Q6P161 138 aaKnown RBP1.69□□□□□ -2.14
TUBD1-208ENST00000588009 IFI27L1Q96BM0 104 aa1.69□□□□□ -2.14
TUBD1-208ENST00000588009 PPP3R2Q96LZ3 170 aa1.69□□□□□ -2.14
TUBD1-208ENST00000588009 NBDYA0A0U1RRE5 68 aa1.68□□□□□ -2.14
TUBD1-208ENST00000588009 FXYD4P59646 89 aa1.68□□□□□ -2.14
TUBD1-208ENST00000588009 NPC2P61916 151 aa1.68□□□□□ -2.14
TUBD1-208ENST00000588009 INSL4Q14641 139 aa1.68□□□□□ -2.14
TUBD1-208ENST00000588009 RPRMQ9NS64 109 aa1.68□□□□□ -2.14
TUBD1-208ENST00000588009 MRPL35Q9NZE8 188 aaKnown RBP1.68□□□□□ -2.14
TUBD1-208ENST00000588009 LOC101927531A0A1B0GV80 90 aa1.67□□□□□ -2.14
TUBD1-208ENST00000588009 APOC4-APOC2K7ER74 178 aa1.67□□□□□ -2.14
TUBD1-208ENST00000588009 APOC2P02655 101 aa1.67□□□□□ -2.14
TUBD1-208ENST00000588009 CCKP06307 115 aa1.67□□□□□ -2.14
TUBD1-208ENST00000588009 C10orf82Q8WW14 230 aa1.67□□□□□ -2.14
TUBD1-208ENST00000588009 DSCR8Q96T75 97 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms