RNA–Protein interactions for RNA: ENST00000587220.5

ZNF540-205, Transcript of zinc finger protein 540, humanhuman

TSL 2

Gene ZNF540, Length 576 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-205ENST00000587220 A0A096LNI7 61 aa6.74□□□□□ -1.33
ZNF540-205ENST00000587220 M0QXV9 152 aa6.74□□□□□ -1.33
ZNF540-205ENST00000587220 LEPROTO15243 131 aa6.74□□□□□ -1.33
ZNF540-205ENST00000587220 Q6ZRU5 148 aa6.74□□□□□ -1.33
ZNF540-205ENST00000587220 PLEKHB2Q96CS7 222 aa6.74□□□□□ -1.33
ZNF540-205ENST00000587220 NAA38Q9BRA0 125 aaKnown RBP6.74□□□□□ -1.33
ZNF540-205ENST00000587220 PRO0461Q9UI25 63 aa6.74□□□□□ -1.33
ZNF540-205ENST00000587220 FAT3Q8TDW7 4589 aa6.73□□□□□ -1.33
ZNF540-205ENST00000587220 H3BMG7 143 aa6.73□□□□□ -1.33
ZNF540-205ENST00000587220 COX7A2LO14548 114 aa6.73□□□□□ -1.33
ZNF540-205ENST00000587220 SYCNQ0VAF6 134 aa6.73□□□□□ -1.33
ZNF540-205ENST00000587220 SRSF9Q13242 221 aaKnown RBP eCLIP6.73□□□□□ -1.33
ZNF540-205ENST00000587220 RNASE13Q5GAN3 156 aaKnown RBP6.73□□□□□ -1.33
ZNF540-205ENST00000587220 PLA2G2DQ9UNK4 145 aa6.73□□□□□ -1.33
ZNF540-205ENST00000587220 UBE2D4Q9Y2X8 147 aa6.73□□□□□ -1.33
ZNF540-205ENST00000587220 CSDC2Q9Y534 153 aaKnown RBP6.73□□□□□ -1.33
ZNF540-205ENST00000587220 PKHD1L1Q86WI1 4243 aa6.73□□□□□ -1.33
ZNF540-205ENST00000587220 TRAV13-1A0A0B4J241 112 aa6.72□□□□□ -1.33
ZNF540-205ENST00000587220 J3QQQ9 107 aa6.72□□□□□ -1.33
ZNF540-205ENST00000587220 RPL24P83731 157 aaKnown RBP6.72□□□□□ -1.33
ZNF540-205ENST00000587220 C21orf62-AS1Q17RA5 79 aa6.72□□□□□ -1.33
ZNF540-205ENST00000587220 TMEM223A0PJW6 202 aa6.71□□□□□ -1.34
ZNF540-205ENST00000587220 LGALS3P17931 250 aaKnown RBP6.71□□□□□ -1.34
ZNF540-205ENST00000587220 Q6ZUT4 128 aa6.71□□□□□ -1.34
ZNF540-205ENST00000587220 LINC01600Q96MT4 127 aa6.71□□□□□ -1.34
ZNF540-205ENST00000587220 CAMK2N2Q96S95 79 aa6.71□□□□□ -1.34
ZNF540-205ENST00000587220 AMELXQ99217 191 aa6.71□□□□□ -1.34
ZNF540-205ENST00000587220 A0A0B4J2C4 111 aa6.7□□□□□ -1.34
ZNF540-205ENST00000587220 TMEM238C9JI98 176 aa6.7□□□□□ -1.34
ZNF540-205ENST00000587220 APOMO95445 188 aa6.7□□□□□ -1.34
ZNF540-205ENST00000587220 PRR3P79522 188 aaKnown RBP6.7□□□□□ -1.34
ZNF540-205ENST00000587220 TMEM170BQ5T4T1 132 aa6.7□□□□□ -1.34
ZNF540-205ENST00000587220 TIMM21Q9BVV7 248 aa6.7□□□□□ -1.34
ZNF540-205ENST00000587220 SPANXA1Q9NS26 97 aa6.7□□□□□ -1.34
ZNF540-205ENST00000587220 HMCN2Q8NDA2 5059 aa6.7□□□□□ -1.34
ZNF540-205ENST00000587220 IGLV4-3A0A075B6K6 122 aa6.69□□□□□ -1.34
ZNF540-205ENST00000587220 LOC107984640A0A0U1RRK4 108 aa6.69□□□□□ -1.34
ZNF540-205ENST00000587220 TSPAN13O95857 204 aa6.69□□□□□ -1.34
ZNF540-205ENST00000587220 RPL39P62891 51 aaKnown RBP6.69□□□□□ -1.34
ZNF540-205ENST00000587220 MRPS36P82909 103 aaKnown RBP6.69□□□□□ -1.34
ZNF540-205ENST00000587220 GAGE2BQ13066 116 aa6.69□□□□□ -1.34
ZNF540-205ENST00000587220 C5orf38Q86SI9 138 aa6.69□□□□□ -1.34
ZNF540-205ENST00000587220 SIGMAR1Q99720 223 aa6.69□□□□□ -1.34
ZNF540-205ENST00000587220 ZNF22P17026 224 aaPredicted RBP6.68□□□□□ -1.34
ZNF540-205ENST00000587220 SPAG11BQ08648 103 aa6.68□□□□□ -1.34
ZNF540-205ENST00000587220 PRO1854Q9UHT4 67 aa6.68□□□□□ -1.34
ZNF540-205ENST00000587220 TINCRA0A1B0GVN0 87 aa6.67□□□□□ -1.34
ZNF540-205ENST00000587220 TIMM17BO60830 172 aa6.67□□□□□ -1.34
ZNF540-205ENST00000587220 CFC1BP0CG36 223 aa6.67□□□□□ -1.34
ZNF540-205ENST00000587220 CFC1P0CG37 223 aa6.67□□□□□ -1.34
ZNF540-205ENST00000587220 TSPEAR-AS2P59090 65 aa6.67□□□□□ -1.34
ZNF540-205ENST00000587220 C2orf48Q96LS8 159 aa6.67□□□□□ -1.34
ZNF540-205ENST00000587220 A0A0J9YXY3 114 aa6.66□□□□□ -1.34
ZNF540-205ENST00000587220 MT1HL1P0DM35 61 aa6.66□□□□□ -1.34
ZNF540-205ENST00000587220 RPL18AQ02543 176 aaKnown RBP6.66□□□□□ -1.34
ZNF540-205ENST00000587220 ETDBQ3ZM63 59 aa6.66□□□□□ -1.34
ZNF540-205ENST00000587220 Q6ZRP5 223 aa6.66□□□□□ -1.34
ZNF540-205ENST00000587220 TEN1Q86WV5 123 aa6.66□□□□□ -1.34
ZNF540-205ENST00000587220 PPDPFLQ8WWR9 84 aa6.66□□□□□ -1.34
ZNF540-205ENST00000587220 SPANXDQ9BXN6 97 aa6.66□□□□□ -1.34
ZNF540-205ENST00000587220 PPDPFQ9H3Y8 114 aa6.66□□□□□ -1.34
ZNF540-205ENST00000587220 SPANXCQ9NY87 97 aa6.66□□□□□ -1.34
ZNF540-205ENST00000587220 REG3GQ6UW15 175 aa6.65□□□□□ -1.34
ZNF540-205ENST00000587220 OPRPNQ99935 248 aaPredicted RBP6.65□□□□□ -1.34
ZNF540-205ENST00000587220 IGLV5-45A0A087WSX0 123 aa6.64□□□□□ -1.35
ZNF540-205ENST00000587220 IFITM1P13164 125 aa6.64□□□□□ -1.35
ZNF540-205ENST00000587220 SPINK6Q6UWN8 80 aa6.64□□□□□ -1.35
ZNF540-205ENST00000587220 FAM19A3Q7Z5A8 133 aa6.64□□□□□ -1.35
ZNF540-205ENST00000587220 UBR4Q5T4S7 5183 aa6.63□□□□□ -1.35
ZNF540-205ENST00000587220 IGHV3OR16-9A0A0B4J2B5 98 aa6.63□□□□□ -1.35
ZNF540-205ENST00000587220 LOC107984156A0A0G2JMH3 177 aa6.63□□□□□ -1.35
ZNF540-205ENST00000587220 A0A0J9YXV3 536 aa6.63□□□□□ -1.35
ZNF540-205ENST00000587220 TRBV30A0A0K0K1B3 111 aa6.63□□□□□ -1.35
ZNF540-205ENST00000587220 NDUFA1O15239 70 aa6.63□□□□□ -1.35
ZNF540-205ENST00000587220 PSMB2P49721 201 aa6.63□□□□□ -1.35
ZNF540-205ENST00000587220 ARL17AQ8IVW1 177 aa6.63□□□□□ -1.35
ZNF540-205ENST00000587220 MTURNQ8N3F0 131 aa6.63□□□□□ -1.35
ZNF540-205ENST00000587220 COPS9Q8WXC6 57 aa6.63□□□□□ -1.35
ZNF540-205ENST00000587220 ERG28Q9UKR5 140 aa6.63□□□□□ -1.35
ZNF540-205ENST00000587220 A4D1N5 150 aa6.62□□□□□ -1.35
ZNF540-205ENST00000587220 F8WDY8 70 aa6.62□□□□□ -1.35
ZNF540-205ENST00000587220 TCL1BO95988 128 aa6.62□□□□□ -1.35
ZNF540-205ENST00000587220 SMCPP49901 116 aaPredicted RBP6.62□□□□□ -1.35
ZNF540-205ENST00000587220 C9orf116Q5BN46 136 aaPredicted RBP6.62□□□□□ -1.35
ZNF540-205ENST00000587220 A0A1W2PNN7 141 aa6.61□□□□□ -1.35
ZNF540-205ENST00000587220 ATXN8Q156A1 80 aa6.61□□□□□ -1.35
ZNF540-205ENST00000587220 FAM104AQ969W3 186 aa6.61□□□□□ -1.35
ZNF540-205ENST00000587220 LITAFQ99732 161 aa6.61□□□□□ -1.35
ZNF540-205ENST00000587220 A0A1B0GV72 72 aa6.6□□□□□ -1.35
ZNF540-205ENST00000587220 SCGB1C2P0DMR2 95 aa6.6□□□□□ -1.35
ZNF540-205ENST00000587220 MUSTN1Q8IVN3 82 aa6.6□□□□□ -1.35
ZNF540-205ENST00000587220 A0A087WZ39 114 aa6.59□□□□□ -1.35
ZNF540-205ENST00000587220 RPL13AP40429 203 aaKnown RBP6.59□□□□□ -1.35
ZNF540-205ENST00000587220 HERVK_113P63121 156 aa6.59□□□□□ -1.35
ZNF540-205ENST00000587220 C1orf137Q5JT78 98 aa6.59□□□□□ -1.35
ZNF540-205ENST00000587220 LINC00242Q5T6M2 205 aa6.59□□□□□ -1.35
ZNF540-205ENST00000587220 UNQ6190/PRO20217Q6UXQ8 127 aa6.59□□□□□ -1.35
ZNF540-205ENST00000587220 PHF5AQ7RTV0 110 aaKnown RBP6.59□□□□□ -1.35
ZNF540-205ENST00000587220 NDUFA12Q9UI09 145 aa6.59□□□□□ -1.35
ZNF540-205ENST00000587220 PSORS1C2Q9UIG4 136 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms