RNA–Protein interactions for RNA: ENST00000586833.5

TPM4-205, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-205ENST00000586833 SERTAD4-AS1Q5TG53 156 aa8.76□□□□□ -1.01
TPM4-205ENST00000586833 SND1-IT1Q9HBX3 110 aa8.76□□□□□ -1.01
TPM4-205ENST00000586833 PSORS1C2Q9UIG4 136 aa8.76□□□□□ -1.01
TPM4-205ENST00000586833 IGLV5-37A0A075B6J1 123 aa8.75□□□□□ -1.01
TPM4-205ENST00000586833 OXTP01178 125 aa8.75□□□□□ -1.01
TPM4-205ENST00000586833 SPINK6Q6UWN8 80 aa8.75□□□□□ -1.01
TPM4-205ENST00000586833 SMIM13P0DJ93 91 aa8.74□□□□□ -1.01
TPM4-205ENST00000586833 A0A0U1RRA0 63 aa8.73□□□□□ -1.01
TPM4-205ENST00000586833 REG3GQ6UW15 175 aa8.73□□□□□ -1.01
TPM4-205ENST00000586833 MIEN1Q9BRT3 115 aa8.73□□□□□ -1.01
TPM4-205ENST00000586833 KRTAP29-1A8MX34 341 aaPredicted RBP8.72□□□□□ -1.01
TPM4-205ENST00000586833 KRTAP7-1Q8IUC3 87 aa8.72□□□□□ -1.01
TPM4-205ENST00000586833 HIST3H2BBQ8N257 126 aa8.72□□□□□ -1.01
TPM4-205ENST00000586833 MIR7-3HGQ8N6C7 128 aa8.72□□□□□ -1.01
TPM4-205ENST00000586833 TSPEAR-AS2P59090 65 aa8.71□□□□□ -1.02
TPM4-205ENST00000586833 SNRPEP62304 92 aaKnown RBP8.71□□□□□ -1.02
TPM4-205ENST00000586833 SRRM2Q9UQ35 2752 aaKnown RBP8.71□□□□□ -1.02
TPM4-205ENST00000586833 IGLV7-43P04211 117 aa8.7□□□□□ -1.02
TPM4-205ENST00000586833 HNRNPA3P51991 378 aaKnown RBP8.7□□□□□ -1.02
TPM4-205ENST00000586833 S100A12P80511 92 aa8.7□□□□□ -1.02
TPM4-205ENST00000586833 DIRC1Q969H9 104 aa8.7□□□□□ -1.02
TPM4-205ENST00000586833 LINC00167Q96N53 147 aa8.7□□□□□ -1.02
TPM4-205ENST00000586833 GAGE10A6NGK3 116 aa8.69□□□□□ -1.02
TPM4-205ENST00000586833 HSBP1L1C9JCN9 74 aa8.69□□□□□ -1.02
TPM4-205ENST00000586833 VPREB1P12018 145 aa8.69□□□□□ -1.02
TPM4-205ENST00000586833 BOD1L2Q8IYS8 172 aa8.69□□□□□ -1.02
TPM4-205ENST00000586833 HIST1H2BLQ99880 126 aa8.69□□□□□ -1.02
TPM4-205ENST00000586833 IGKV2D-26A0A0A0MRZ7 120 aa8.67□□□□□ -1.02
TPM4-205ENST00000586833 RPL37AP8A6NKH3 93 aa8.67□□□□□ -1.02
TPM4-205ENST00000586833 ZNF815PA8K554 130 aa8.67□□□□□ -1.02
TPM4-205ENST00000586833 M0R378 163 aa8.67□□□□□ -1.02
TPM4-205ENST00000586833 RPL28P46779 137 aaKnown RBP8.67□□□□□ -1.02
TPM4-205ENST00000586833 SRSF9Q13242 221 aaKnown RBP eCLIP8.67□□□□□ -1.02
TPM4-205ENST00000586833 A0A0J9YXY3 114 aa8.66□□□□□ -1.02
TPM4-205ENST00000586833 BCE1O60756 84 aa8.66□□□□□ -1.02
TPM4-205ENST00000586833 TIMM17BO60830 172 aa8.65□□□□□ -1.02
TPM4-205ENST00000586833 COPS9Q8WXC6 57 aa8.65□□□□□ -1.02
TPM4-205ENST00000586833 IGKV2-28A0A075B6P5 120 aa8.64□□□□□ -1.03
TPM4-205ENST00000586833 ZNF861PO60384 105 aa8.64□□□□□ -1.03
TPM4-205ENST00000586833 IGKV2D-28P01615 120 aa8.64□□□□□ -1.03
TPM4-205ENST00000586833 UBE2AP49459 152 aa8.64□□□□□ -1.03
TPM4-205ENST00000586833 SCGB1D4Q6XE38 83 aa8.64□□□□□ -1.03
TPM4-205ENST00000586833 KRTAP11-1Q8IUC1 163 aa8.64□□□□□ -1.03
TPM4-205ENST00000586833 IGLV1-50A0A075B6I6 118 aa8.63□□□□□ -1.03
TPM4-205ENST00000586833 LOC107984156A0A0G2JMH3 177 aa8.63□□□□□ -1.03
TPM4-205ENST00000586833 C5orf52A6NGY3 159 aa8.63□□□□□ -1.03
TPM4-205ENST00000586833 ARL17AQ8IVW1 177 aa8.63□□□□□ -1.03
TPM4-205ENST00000586833 ATOH7Q8N100 152 aa8.63□□□□□ -1.03
TPM4-205ENST00000586833 CBY1Q9Y3M2 126 aa8.63□□□□□ -1.03
TPM4-205ENST00000586833 TMEM238C9JI98 176 aa8.62□□□□□ -1.03
TPM4-205ENST00000586833 H0Y9J4 135 aa8.62□□□□□ -1.03
TPM4-205ENST00000586833 SCGB1D1O95968 90 aa8.62□□□□□ -1.03
TPM4-205ENST00000586833 DAND5Q8N907 189 aa8.62□□□□□ -1.03
TPM4-205ENST00000586833 SPANXB1Q9NS25 103 aaPredicted RBP8.62□□□□□ -1.03
TPM4-205ENST00000586833 MYCBP2O75592 4640 aa8.61□□□□□ -1.03
TPM4-205ENST00000586833 TRBV10-2A0A0K0K1G8 114 aa8.61□□□□□ -1.03
TPM4-205ENST00000586833 NCR3O14931 201 aa8.61□□□□□ -1.03
TPM4-205ENST00000586833 NDUFC2O95298 119 aa8.61□□□□□ -1.03
TPM4-205ENST00000586833 LINC01600Q96MT4 127 aa8.6□□□□□ -1.03
TPM4-205ENST00000586833 PRYO14603 147 aa8.59□□□□□ -1.03
TPM4-205ENST00000586833 ANKRD39Q53RE8 183 aa8.59□□□□□ -1.03
TPM4-205ENST00000586833 S100A7L2Q5SY68 101 aa8.59□□□□□ -1.03
TPM4-205ENST00000586833 Q6ZVH6 145 aa8.59□□□□□ -1.03
TPM4-205ENST00000586833 FAM19A1Q7Z5A9 133 aa8.59□□□□□ -1.03
TPM4-205ENST00000586833 TMEM126AQ9H061 195 aa8.59□□□□□ -1.03
TPM4-205ENST00000586833 FLG2Q5D862 2391 aaPredicted RBP8.58□□□□□ -1.04
TPM4-205ENST00000586833 DDTP30046 118 aa8.57□□□□□ -1.04
TPM4-205ENST00000586833 NPC2P61916 151 aa8.57□□□□□ -1.04
TPM4-205ENST00000586833 Q8NDZ9 215 aa8.57□□□□□ -1.04
TPM4-205ENST00000586833 LINC00308Q8TCZ7 52 aa8.57□□□□□ -1.04
TPM4-205ENST00000586833 SPANXCQ9NY87 97 aa8.57□□□□□ -1.04
TPM4-205ENST00000586833 IFITM1P13164 125 aa8.56□□□□□ -1.04
TPM4-205ENST00000586833 ADAMTSL4-AS1Q5T5F5 129 aa8.56□□□□□ -1.04
TPM4-205ENST00000586833 PKHD1L1Q86WI1 4243 aa8.56□□□□□ -1.04
TPM4-205ENST00000586833 FAT3Q8TDW7 4589 aa8.55□□□□□ -1.04
TPM4-205ENST00000586833 ETDCA0A1B0GVM5 59 aa8.55□□□□□ -1.04
TPM4-205ENST00000586833 LINC00518Q8N0U6 118 aa8.55□□□□□ -1.04
TPM4-205ENST00000586833 LITAFQ99732 161 aa8.55□□□□□ -1.04
TPM4-205ENST00000586833 SPANXDQ9BXN6 97 aa8.55□□□□□ -1.04
TPM4-205ENST00000586833 TTTY13Q9BZ97 58 aa8.55□□□□□ -1.04
TPM4-205ENST00000586833 KCNQ1DNQ9H478 68 aa8.55□□□□□ -1.04
TPM4-205ENST00000586833 TRBV10-3A0A0K0K1G6 114 aa8.54□□□□□ -1.04
TPM4-205ENST00000586833 RPL13AP40429 203 aaKnown RBP8.54□□□□□ -1.04
TPM4-205ENST00000586833 HINT1P49773 126 aaPredicted RBP8.54□□□□□ -1.04
TPM4-205ENST00000586833 PCP2Q8IVA1 136 aa8.53□□□□□ -1.04
TPM4-205ENST00000586833 LINC00337Q8N6G1 96 aa8.53□□□□□ -1.04
TPM4-205ENST00000586833 PPDPFQ9H3Y8 114 aa8.53□□□□□ -1.04
TPM4-205ENST00000586833 DMBT1Q9UGM3 2413 aaPredicted RBP8.53□□□□□ -1.04
TPM4-205ENST00000586833 SOSTDC1Q6X4U4 206 aa8.52□□□□□ -1.05
TPM4-205ENST00000586833 OR13C6PQ8NH95 151 aa8.52□□□□□ -1.05
TPM4-205ENST00000586833 TRAV23DV6A0A075B6W5 121 aa8.51□□□□□ -1.05
TPM4-205ENST00000586833 PRLHP81277 87 aa8.51□□□□□ -1.05
TPM4-205ENST00000586833 KRTAP13-1Q8IUC0 172 aa8.51□□□□□ -1.05
TPM4-205ENST00000586833 ZNF706Q9Y5V0 76 aaPredicted RBP8.51□□□□□ -1.05
TPM4-205ENST00000586833 LRP1Q07954 4544 aaKnown RBP8.51□□□□□ -1.05
TPM4-205ENST00000586833 IGLV6-57P01721 117 aa8.5□□□□□ -1.05
TPM4-205ENST00000586833 JOSD1Q15040 202 aaPredicted RBP8.5□□□□□ -1.05
TPM4-205ENST00000586833 HIGD2AQ9BW72 106 aa8.5□□□□□ -1.05
TPM4-205ENST00000586833 MT1HL1P0DM35 61 aa8.49□□□□□ -1.05
TPM4-205ENST00000586833 SPRR1AP35321 89 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms