RNA–Protein interactions for RNA: ENST00000586796.1

RETREG3-204, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-204ENST00000586796 ATOH7Q8N100 152 aa13.31□□□□□ -0.28
RETREG3-204ENST00000586796 PSORS1C2Q9UIG4 136 aa13.3□□□□□ -0.28
RETREG3-204ENST00000586796 NMUP48645 174 aa13.29□□□□□ -0.28
RETREG3-204ENST00000586796 KRTAP11-1Q8IUC1 163 aa13.29□□□□□ -0.28
RETREG3-204ENST00000586796 PLA2G2DQ9UNK4 145 aa13.28□□□□□ -0.28
RETREG3-204ENST00000586796 C5orf52A6NGY3 159 aa13.27□□□□□ -0.29
RETREG3-204ENST00000586796 LINC00587B1AMM8 73 aa13.27□□□□□ -0.29
RETREG3-204ENST00000586796 LBHQ53QV2 105 aaPredicted RBP13.27□□□□□ -0.29
RETREG3-204ENST00000586796 C1orf137Q5JT78 98 aa13.27□□□□□ -0.29
RETREG3-204ENST00000586796 MRPL55Q7Z7F7 128 aaKnown RBP13.27□□□□□ -0.29
RETREG3-204ENST00000586796 MIR7-3HGQ8N6C7 128 aa13.27□□□□□ -0.29
RETREG3-204ENST00000586796 NKAPP1Q8N9T2 125 aa13.27□□□□□ -0.29
RETREG3-204ENST00000586796 GAGE10A6NGK3 116 aa13.26□□□□□ -0.29
RETREG3-204ENST00000586796 IGKV2D-26A0A0A0MRZ7 120 aa13.25□□□□□ -0.29
RETREG3-204ENST00000586796 DAND5Q8N907 189 aa13.24□□□□□ -0.29
RETREG3-204ENST00000586796 TP73-AS1Q9UF72 201 aa13.24□□□□□ -0.29
RETREG3-204ENST00000586796 LINC00167Q96N53 147 aa13.23□□□□□ -0.29
RETREG3-204ENST00000586796 IGLV5-37A0A075B6J1 123 aa13.22□□□□□ -0.29
RETREG3-204ENST00000586796 A0A0J9YXY3 114 aa13.22□□□□□ -0.29
RETREG3-204ENST00000586796 RPL37AP8A6NKH3 93 aa13.22□□□□□ -0.29
RETREG3-204ENST00000586796 VPREB1P12018 145 aa13.22□□□□□ -0.29
RETREG3-204ENST00000586796 AKR1D1P51857 326 aa13.22□□□□□ -0.29
RETREG3-204ENST00000586796 RPL24P83731 157 aaKnown RBP13.22□□□□□ -0.29
RETREG3-204ENST00000586796 ANKRD39Q53RE8 183 aa13.22□□□□□ -0.29
RETREG3-204ENST00000586796 Q8NDZ9 215 aa13.22□□□□□ -0.29
RETREG3-204ENST00000586796 TTTY13Q9BZ97 58 aa13.22□□□□□ -0.29
RETREG3-204ENST00000586796 ZNF815PA8K554 130 aa13.2□□□□□ -0.3
RETREG3-204ENST00000586796 PKHD1L1Q86WI1 4243 aa13.19□□□□□ -0.3
RETREG3-204ENST00000586796 BOD1L2Q8IYS8 172 aa13.19□□□□□ -0.3
RETREG3-204ENST00000586796 SCGB1D1O95968 90 aa13.17□□□□□ -0.3
RETREG3-204ENST00000586796 TMA7Q9Y2S6 64 aaKnown RBP13.17□□□□□ -0.3
RETREG3-204ENST00000586796 IGKV2-28A0A075B6P5 120 aa13.16□□□□□ -0.3
RETREG3-204ENST00000586796 IGKV2D-28P01615 120 aa13.16□□□□□ -0.3
RETREG3-204ENST00000586796 IGLV7-43P04211 117 aa13.16□□□□□ -0.3
RETREG3-204ENST00000586796 NPC2P61916 151 aa13.16□□□□□ -0.3
RETREG3-204ENST00000586796 ADAMTSL4-AS1Q5T5F5 129 aa13.15□□□□□ -0.3
RETREG3-204ENST00000586796 SPINK6Q6UWN8 80 aa13.15□□□□□ -0.3
RETREG3-204ENST00000586796 FLG2Q5D862 2391 aaPredicted RBP13.15□□□□□ -0.3
RETREG3-204ENST00000586796 NCR3O14931 201 aa13.14□□□□□ -0.31
RETREG3-204ENST00000586796 SRSF9Q13242 221 aaKnown RBP eCLIP13.14□□□□□ -0.31
RETREG3-204ENST00000586796 MIEN1Q9BRT3 115 aa13.14□□□□□ -0.31
RETREG3-204ENST00000586796 HSBP1L1C9JCN9 74 aa13.13□□□□□ -0.31
RETREG3-204ENST00000586796 PCP2Q8IVA1 136 aa13.12□□□□□ -0.31
RETREG3-204ENST00000586796 M0R378 163 aa13.11□□□□□ -0.31
RETREG3-204ENST00000586796 SCGB1D4Q6XE38 83 aa13.11□□□□□ -0.31
RETREG3-204ENST00000586796 IGLV1-50A0A075B6I6 118 aa13.1□□□□□ -0.31
RETREG3-204ENST00000586796 LITAFQ99732 161 aa13.1□□□□□ -0.31
RETREG3-204ENST00000586796 J3QL48 77 aa13.09□□□□□ -0.31
RETREG3-204ENST00000586796 TIMM17BO60830 172 aa13.09□□□□□ -0.31
RETREG3-204ENST00000586796 SOSTDC1Q6X4U4 206 aa13.09□□□□□ -0.31
RETREG3-204ENST00000586796 MYCBP2O75592 4640 aa13.08□□□□□ -0.32
RETREG3-204ENST00000586796 LOC107984156A0A0G2JMH3 177 aa13.08□□□□□ -0.32
RETREG3-204ENST00000586796 KRTAP29-1A8MX34 341 aaPredicted RBP13.08□□□□□ -0.32
RETREG3-204ENST00000586796 EIF4EBP3O60516 100 aaPredicted RBP13.08□□□□□ -0.32
RETREG3-204ENST00000586796 BCE1O60756 84 aa13.08□□□□□ -0.32
RETREG3-204ENST00000586796 ARL17AQ8IVW1 177 aa13.08□□□□□ -0.32
RETREG3-204ENST00000586796 TMEM238C9JI98 176 aa13.07□□□□□ -0.32
RETREG3-204ENST00000586796 OXTP01178 125 aa13.07□□□□□ -0.32
RETREG3-204ENST00000586796 REG3GQ6UW15 175 aa13.05□□□□□ -0.32
RETREG3-204ENST00000586796 LINC00308Q8TCZ7 52 aa13.05□□□□□ -0.32
RETREG3-204ENST00000586796 DIRC1Q969H9 104 aa13.05□□□□□ -0.32
RETREG3-204ENST00000586796 ZNF861PO60384 105 aa13.04□□□□□ -0.32
RETREG3-204ENST00000586796 TMEM126AQ9H061 195 aa13.04□□□□□ -0.32
RETREG3-204ENST00000586796 UBE2AP49459 152 aa13.03□□□□□ -0.32
RETREG3-204ENST00000586796 H0Y9J4 135 aa13.02□□□□□ -0.33
RETREG3-204ENST00000586796 NDUFC2O95298 119 aa13.02□□□□□ -0.33
RETREG3-204ENST00000586796 SPANXB1Q9NS25 103 aaPredicted RBP13.02□□□□□ -0.33
RETREG3-204ENST00000586796 TRBV10-3A0A0K0K1G6 114 aa13.01□□□□□ -0.33
RETREG3-204ENST00000586796 RPL28P46779 137 aaKnown RBP13.01□□□□□ -0.33
RETREG3-204ENST00000586796 FAM19A1Q7Z5A9 133 aa13.01□□□□□ -0.33
RETREG3-204ENST00000586796 TRBV10-2A0A0K0K1G8 114 aa13□□□□□ -0.33
RETREG3-204ENST00000586796 LRP1Q07954 4544 aaKnown RBP13□□□□□ -0.33
RETREG3-204ENST00000586796 FAT3Q8TDW7 4589 aa13□□□□□ -0.33
RETREG3-204ENST00000586796 PRLHP81277 87 aa12.99□□□□□ -0.33
RETREG3-204ENST00000586796 JOSD1Q15040 202 aaPredicted RBP12.99□□□□□ -0.33
RETREG3-204ENST00000586796 S100A7L2Q5SY68 101 aa12.99□□□□□ -0.33
RETREG3-204ENST00000586796 SPANXDQ9BXN6 97 aa12.99□□□□□ -0.33
RETREG3-204ENST00000586796 SPANXCQ9NY87 97 aa12.99□□□□□ -0.33
RETREG3-204ENST00000586796 DDTP30046 118 aa12.98□□□□□ -0.33
RETREG3-204ENST00000586796 PRYO14603 147 aa12.97□□□□□ -0.33
RETREG3-204ENST00000586796 PAM16Q9Y3D7 125 aa12.97□□□□□ -0.33
RETREG3-204ENST00000586796 S100A12P80511 92 aa12.96□□□□□ -0.33
RETREG3-204ENST00000586796 LINC01600Q96MT4 127 aa12.96□□□□□ -0.33
RETREG3-204ENST00000586796 KCNQ1DNQ9H478 68 aa12.95□□□□□ -0.34
RETREG3-204ENST00000586796 SPATA45Q537H7 98 aa12.94□□□□□ -0.34
RETREG3-204ENST00000586796 KRTAP13-1Q8IUC0 172 aa12.94□□□□□ -0.34
RETREG3-204ENST00000586796 MUSTN1Q8IVN3 82 aa12.94□□□□□ -0.34
RETREG3-204ENST00000586796 VAMP8Q9BV40 100 aa12.94□□□□□ -0.34
RETREG3-204ENST00000586796 OR13C6PQ8NH95 151 aa12.93□□□□□ -0.34
RETREG3-204ENST00000586796 COX8AP10176 69 aa12.92□□□□□ -0.34
RETREG3-204ENST00000586796 IFITM1P13164 125 aa12.92□□□□□ -0.34
RETREG3-204ENST00000586796 Q6ZVH6 145 aa12.92□□□□□ -0.34
RETREG3-204ENST00000586796 COPS9Q8WXC6 57 aa12.92□□□□□ -0.34
RETREG3-204ENST00000586796 ETDCA0A1B0GVM5 59 aa12.91□□□□□ -0.34
RETREG3-204ENST00000586796 IGLV6-57P01721 117 aa12.91□□□□□ -0.34
RETREG3-204ENST00000586796 MT1HL1P0DM35 61 aa12.91□□□□□ -0.34
RETREG3-204ENST00000586796 C14orf144Q96I85 54 aa12.91□□□□□ -0.34
RETREG3-204ENST00000586796 SPRR1AP35321 89 aa12.89□□□□□ -0.35
RETREG3-204ENST00000586796 PYY3Q5JQD4 70 aa12.89□□□□□ -0.35
RETREG3-204ENST00000586796 HIGD2AQ9BW72 106 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms