RNA–Protein interactions for RNA: ENST00000585134.1

MKS1-213, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-213ENST00000585134 GAGE10A6NGK3 116 aa8.78□□□□□ -1
MKS1-213ENST00000585134 NMUP48645 174 aa8.78□□□□□ -1
MKS1-213ENST00000585134 KRTAP11-1Q8IUC1 163 aa8.78□□□□□ -1
MKS1-213ENST00000585134 MIR7-3HGQ8N6C7 128 aa8.78□□□□□ -1
MKS1-213ENST00000585134 NKAPP1Q8N9T2 125 aa8.78□□□□□ -1
MKS1-213ENST00000585134 PSORS1C2Q9UIG4 136 aa8.78□□□□□ -1
MKS1-213ENST00000585134 SRRM2Q9UQ35 2752 aaKnown RBP8.77□□□□□ -1.01
MKS1-213ENST00000585134 IGKV2D-26A0A0A0MRZ7 120 aa8.76□□□□□ -1.01
MKS1-213ENST00000585134 C5orf52A6NGY3 159 aa8.76□□□□□ -1.01
MKS1-213ENST00000585134 LBHQ53QV2 105 aaPredicted RBP8.76□□□□□ -1.01
MKS1-213ENST00000585134 C1orf137Q5JT78 98 aa8.76□□□□□ -1.01
MKS1-213ENST00000585134 MRPL55Q7Z7F7 128 aaKnown RBP8.76□□□□□ -1.01
MKS1-213ENST00000585134 DAND5Q8N907 189 aa8.76□□□□□ -1.01
MKS1-213ENST00000585134 TTTY13Q9BZ97 58 aa8.76□□□□□ -1.01
MKS1-213ENST00000585134 TMA7Q9Y2S6 64 aaKnown RBP8.76□□□□□ -1.01
MKS1-213ENST00000585134 PKHD1L1Q86WI1 4243 aa8.75□□□□□ -1.01
MKS1-213ENST00000585134 FLG2Q5D862 2391 aaPredicted RBP8.75□□□□□ -1.01
MKS1-213ENST00000585134 LINC00587B1AMM8 73 aa8.75□□□□□ -1.01
MKS1-213ENST00000585134 VPREB1P12018 145 aa8.75□□□□□ -1.01
MKS1-213ENST00000585134 ANKRD39Q53RE8 183 aa8.75□□□□□ -1.01
MKS1-213ENST00000585134 Q8NDZ9 215 aa8.75□□□□□ -1.01
MKS1-213ENST00000585134 PLA2G2DQ9UNK4 145 aa8.75□□□□□ -1.01
MKS1-213ENST00000585134 IGLV5-37A0A075B6J1 123 aa8.74□□□□□ -1.01
MKS1-213ENST00000585134 ZNF815PA8K554 130 aa8.74□□□□□ -1.01
MKS1-213ENST00000585134 TP73-AS1Q9UF72 201 aa8.74□□□□□ -1.01
MKS1-213ENST00000585134 A0A0J9YXY3 114 aa8.73□□□□□ -1.01
MKS1-213ENST00000585134 RPL37AP8A6NKH3 93 aa8.73□□□□□ -1.01
MKS1-213ENST00000585134 AKR1D1P51857 326 aa8.73□□□□□ -1.01
MKS1-213ENST00000585134 RPL24P83731 157 aaKnown RBP8.73□□□□□ -1.01
MKS1-213ENST00000585134 LINC00167Q96N53 147 aa8.73□□□□□ -1.01
MKS1-213ENST00000585134 NPC2P61916 151 aa8.72□□□□□ -1.01
MKS1-213ENST00000585134 BOD1L2Q8IYS8 172 aa8.72□□□□□ -1.01
MKS1-213ENST00000585134 NCR3O14931 201 aa8.71□□□□□ -1.02
MKS1-213ENST00000585134 SCGB1D1O95968 90 aa8.71□□□□□ -1.02
MKS1-213ENST00000585134 IGKV2-28A0A075B6P5 120 aa8.7□□□□□ -1.02
MKS1-213ENST00000585134 IGKV2D-28P01615 120 aa8.7□□□□□ -1.02
MKS1-213ENST00000585134 MIEN1Q9BRT3 115 aa8.7□□□□□ -1.02
MKS1-213ENST00000585134 HSBP1L1C9JCN9 74 aa8.69□□□□□ -1.02
MKS1-213ENST00000585134 IGLV7-43P04211 117 aa8.68□□□□□ -1.02
MKS1-213ENST00000585134 ADAMTSL4-AS1Q5T5F5 129 aa8.68□□□□□ -1.02
MKS1-213ENST00000585134 SCGB1D4Q6XE38 83 aa8.67□□□□□ -1.02
MKS1-213ENST00000585134 PCP2Q8IVA1 136 aa8.67□□□□□ -1.02
MKS1-213ENST00000585134 M0R378 163 aa8.66□□□□□ -1.02
MKS1-213ENST00000585134 TIMM17BO60830 172 aa8.66□□□□□ -1.02
MKS1-213ENST00000585134 SPINK6Q6UWN8 80 aa8.66□□□□□ -1.02
MKS1-213ENST00000585134 SOSTDC1Q6X4U4 206 aa8.66□□□□□ -1.02
MKS1-213ENST00000585134 MYCBP2O75592 4640 aa8.66□□□□□ -1.02
MKS1-213ENST00000585134 LITAFQ99732 161 aa8.65□□□□□ -1.02
MKS1-213ENST00000585134 TMEM238C9JI98 176 aa8.64□□□□□ -1.03
MKS1-213ENST00000585134 J3QL48 77 aa8.64□□□□□ -1.03
MKS1-213ENST00000585134 EIF4EBP3O60516 100 aaPredicted RBP8.64□□□□□ -1.03
MKS1-213ENST00000585134 IGLV1-50A0A075B6I6 118 aa8.63□□□□□ -1.03
MKS1-213ENST00000585134 BCE1O60756 84 aa8.63□□□□□ -1.03
MKS1-213ENST00000585134 SRSF9Q13242 221 aaKnown RBP eCLIP8.63□□□□□ -1.03
MKS1-213ENST00000585134 LINC00308Q8TCZ7 52 aa8.63□□□□□ -1.03
MKS1-213ENST00000585134 UBE2AP49459 152 aa8.62□□□□□ -1.03
MKS1-213ENST00000585134 DIRC1Q969H9 104 aa8.62□□□□□ -1.03
MKS1-213ENST00000585134 SPANXB1Q9NS25 103 aaPredicted RBP8.62□□□□□ -1.03
MKS1-213ENST00000585134 LOC107984156A0A0G2JMH3 177 aa8.61□□□□□ -1.03
MKS1-213ENST00000585134 KRTAP29-1A8MX34 341 aaPredicted RBP8.61□□□□□ -1.03
MKS1-213ENST00000585134 REG3GQ6UW15 175 aa8.61□□□□□ -1.03
MKS1-213ENST00000585134 ARL17AQ8IVW1 177 aa8.61□□□□□ -1.03
MKS1-213ENST00000585134 TMEM126AQ9H061 195 aa8.61□□□□□ -1.03
MKS1-213ENST00000585134 TRBV10-3A0A0K0K1G6 114 aa8.6□□□□□ -1.03
MKS1-213ENST00000585134 H0Y9J4 135 aa8.6□□□□□ -1.03
MKS1-213ENST00000585134 OXTP01178 125 aa8.6□□□□□ -1.03
MKS1-213ENST00000585134 FAM19A1Q7Z5A9 133 aa8.6□□□□□ -1.03
MKS1-213ENST00000585134 SPANXDQ9BXN6 97 aa8.6□□□□□ -1.03
MKS1-213ENST00000585134 SPANXCQ9NY87 97 aa8.6□□□□□ -1.03
MKS1-213ENST00000585134 FAT3Q8TDW7 4589 aa8.6□□□□□ -1.03
MKS1-213ENST00000585134 PRYO14603 147 aa8.59□□□□□ -1.03
MKS1-213ENST00000585134 ZNF861PO60384 105 aa8.59□□□□□ -1.03
MKS1-213ENST00000585134 NDUFC2O95298 119 aa8.59□□□□□ -1.03
MKS1-213ENST00000585134 RPL28P46779 137 aaKnown RBP8.59□□□□□ -1.03
MKS1-213ENST00000585134 PRLHP81277 87 aa8.59□□□□□ -1.03
MKS1-213ENST00000585134 PAM16Q9Y3D7 125 aa8.59□□□□□ -1.03
MKS1-213ENST00000585134 DDTP30046 118 aa8.58□□□□□ -1.04
MKS1-213ENST00000585134 JOSD1Q15040 202 aaPredicted RBP8.58□□□□□ -1.04
MKS1-213ENST00000585134 S100A7L2Q5SY68 101 aa8.58□□□□□ -1.04
MKS1-213ENST00000585134 VAMP8Q9BV40 100 aa8.58□□□□□ -1.04
MKS1-213ENST00000585134 LRP1Q07954 4544 aaKnown RBP8.57□□□□□ -1.04
MKS1-213ENST00000585134 TRBV10-2A0A0K0K1G8 114 aa8.57□□□□□ -1.04
MKS1-213ENST00000585134 SPATA45Q537H7 98 aa8.57□□□□□ -1.04
MKS1-213ENST00000585134 S100A12P80511 92 aa8.56□□□□□ -1.04
MKS1-213ENST00000585134 DMBT1Q9UGM3 2413 aaPredicted RBP8.56□□□□□ -1.04
MKS1-213ENST00000585134 KRTAP13-1Q8IUC0 172 aa8.55□□□□□ -1.04
MKS1-213ENST00000585134 OR13C6PQ8NH95 151 aa8.55□□□□□ -1.04
MKS1-213ENST00000585134 ETDCA0A1B0GVM5 59 aa8.54□□□□□ -1.04
MKS1-213ENST00000585134 COX8AP10176 69 aa8.54□□□□□ -1.04
MKS1-213ENST00000585134 IFITM1P13164 125 aa8.54□□□□□ -1.04
MKS1-213ENST00000585134 PYY3Q5JQD4 70 aa8.54□□□□□ -1.04
MKS1-213ENST00000585134 MUSTN1Q8IVN3 82 aa8.54□□□□□ -1.04
MKS1-213ENST00000585134 COPS9Q8WXC6 57 aa8.54□□□□□ -1.04
MKS1-213ENST00000585134 KCNQ1DNQ9H478 68 aa8.54□□□□□ -1.04
MKS1-213ENST00000585134 TRAV23DV6A0A075B6W5 121 aa8.53□□□□□ -1.04
MKS1-213ENST00000585134 IGLV6-57P01721 117 aa8.53□□□□□ -1.04
MKS1-213ENST00000585134 Q6ZVH6 145 aa8.53□□□□□ -1.04
MKS1-213ENST00000585134 C14orf144Q96I85 54 aa8.53□□□□□ -1.04
MKS1-213ENST00000585134 HIGD2AQ9BW72 106 aa8.53□□□□□ -1.04
MKS1-213ENST00000585134 LINC01600Q96MT4 127 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms