RNA–Protein interactions for RNA: ENST00000584966.1

CDH8-213, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-213ENST00000584966 Q8IZM0 81 aa3.57□□□□□ -1.84
CDH8-213ENST00000584966 HIST3H2BBQ8N257 126 aa3.57□□□□□ -1.84
CDH8-213ENST00000584966 LINC00469Q8N7U9 141 aa3.57□□□□□ -1.84
CDH8-213ENST00000584966 CARD19Q96LW7 228 aa3.57□□□□□ -1.84
CDH8-213ENST00000584966 C6orf48Q9UBA6 75 aa3.57□□□□□ -1.84
CDH8-213ENST00000584966 PCLOQ9Y6V0 5065 aa3.57□□□□□ -1.84
CDH8-213ENST00000584966 TNXBP22105 4242 aa3.57□□□□□ -1.84
CDH8-213ENST00000584966 A0A096LNI7 61 aa3.56□□□□□ -1.84
CDH8-213ENST00000584966 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.56□□□□□ -1.84
CDH8-213ENST00000584966 EPM2AB3EWF7 344 aa3.56□□□□□ -1.84
CDH8-213ENST00000584966 SYS1-DBNDD2H3BUS1 97 aa3.56□□□□□ -1.84
CDH8-213ENST00000584966 C3orf79P0CE67 100 aa3.56□□□□□ -1.84
CDH8-213ENST00000584966 CHTF8P0CG12 524 aa3.56□□□□□ -1.84
CDH8-213ENST00000584966 HAMPP81172 84 aa3.56□□□□□ -1.84
CDH8-213ENST00000584966 LINC01545Q5VT33 79 aa3.56□□□□□ -1.84
CDH8-213ENST00000584966 COX7B2Q8TF08 81 aa3.56□□□□□ -1.84
CDH8-213ENST00000584966 CAMK2N2Q96S95 79 aa3.56□□□□□ -1.84
CDH8-213ENST00000584966 PMCHL2Q9BQD1 86 aa3.56□□□□□ -1.84
CDH8-213ENST00000584966 MAP1LC3CQ9BXW4 147 aa3.56□□□□□ -1.84
CDH8-213ENST00000584966 A0A0U1RRA0 63 aa3.55□□□□□ -1.84
CDH8-213ENST00000584966 H0Y8G0 127 aa3.55□□□□□ -1.84
CDH8-213ENST00000584966 NDUFA1O15239 70 aa3.55□□□□□ -1.84
CDH8-213ENST00000584966 TLX1NBP0CAT3 122 aa3.55□□□□□ -1.84
CDH8-213ENST00000584966 C9orf116Q5BN46 136 aaPredicted RBP3.55□□□□□ -1.84
CDH8-213ENST00000584966 C6orf226Q5I0X4 101 aa3.55□□□□□ -1.84
CDH8-213ENST00000584966 TMEM170BQ5T4T1 132 aa3.55□□□□□ -1.84
CDH8-213ENST00000584966 Q6ZRP5 223 aa3.55□□□□□ -1.84
CDH8-213ENST00000584966 SCXQ7RTU7 201 aa3.55□□□□□ -1.84
CDH8-213ENST00000584966 KRTAP7-1Q8IUC3 87 aa3.55□□□□□ -1.84
CDH8-213ENST00000584966 CIRBP-AS1Q8TBR5 109 aa3.55□□□□□ -1.84
CDH8-213ENST00000584966 SPACA4Q8TDM5 124 aa3.55□□□□□ -1.84
CDH8-213ENST00000584966 HIST1H2BLQ99880 126 aa3.55□□□□□ -1.84
CDH8-213ENST00000584966 TOMM7Q9P0U1 55 aa3.55□□□□□ -1.84
CDH8-213ENST00000584966 TRBV30A0A0K0K1B3 111 aa3.54□□□□□ -1.84
CDH8-213ENST00000584966 LOC107984640A0A0U1RRK4 108 aa3.54□□□□□ -1.84
CDH8-213ENST00000584966 H3BRM9 83 aa3.54□□□□□ -1.84
CDH8-213ENST00000584966 DPM2O94777 84 aa3.54□□□□□ -1.84
CDH8-213ENST00000584966 IGKCP01834 107 aa3.54□□□□□ -1.84
CDH8-213ENST00000584966 TSPEAR-AS2P59090 65 aa3.54□□□□□ -1.84
CDH8-213ENST00000584966 SMIM29Q86T20 159 aa3.54□□□□□ -1.84
CDH8-213ENST00000584966 STPG4Q8N801 248 aa3.54□□□□□ -1.84
CDH8-213ENST00000584966 ZNF625Q96I27 306 aaPredicted RBP3.54□□□□□ -1.84
CDH8-213ENST00000584966 PLAC8Q9NZF1 115 aa3.54□□□□□ -1.84
CDH8-213ENST00000584966 IGKV2D-30A0A075B6S6 120 aa3.53□□□□□ -1.84
CDH8-213ENST00000584966 A0A087WYN8 130 aa3.53□□□□□ -1.84
CDH8-213ENST00000584966 A0A1W2PNN7 141 aa3.53□□□□□ -1.84
CDH8-213ENST00000584966 PLNP26678 52 aa3.53□□□□□ -1.84
CDH8-213ENST00000584966 CXCL5P42830 114 aa3.53□□□□□ -1.84
CDH8-213ENST00000584966 KRTAP10-4P60372 401 aaPredicted RBP3.53□□□□□ -1.84
CDH8-213ENST00000584966 HERV-K104P63124 156 aa3.53□□□□□ -1.84
CDH8-213ENST00000584966 C9orf129Q5T035 196 aaKnown RBP3.53□□□□□ -1.84
CDH8-213ENST00000584966 IGKV2-24A0A0C4DH68 120 aa3.52□□□□□ -1.85
CDH8-213ENST00000584966 FAM168BA1KXE4 195 aa3.52□□□□□ -1.85
CDH8-213ENST00000584966 NDUFC2-KCTD14E9PQ53 114 aa3.52□□□□□ -1.85
CDH8-213ENST00000584966 LEPROTO15243 131 aa3.52□□□□□ -1.85
CDH8-213ENST00000584966 SMR3BP02814 79 aaPredicted RBP3.52□□□□□ -1.85
CDH8-213ENST00000584966 S100A6P06703 90 aa3.52□□□□□ -1.85
CDH8-213ENST00000584966 KRTDAPP60985 99 aa3.52□□□□□ -1.85
CDH8-213ENST00000584966 CKS1BP61024 79 aa3.52□□□□□ -1.85
CDH8-213ENST00000584966 MAJINQ3KP22 176 aa3.52□□□□□ -1.85
CDH8-213ENST00000584966 IGKV2D-26A0A0A0MRZ7 120 aa3.51□□□□□ -1.85
CDH8-213ENST00000584966 E9PLD3 99 aa3.51□□□□□ -1.85
CDH8-213ENST00000584966 RPL18AQ02543 176 aaKnown RBP3.51□□□□□ -1.85
CDH8-213ENST00000584966 J3QQQ9 107 aa3.5□□□□□ -1.85
CDH8-213ENST00000584966 S100A2P29034 98 aa3.5□□□□□ -1.85
CDH8-213ENST00000584966 KRTAP11-1Q8IUC1 163 aa3.5□□□□□ -1.85
CDH8-213ENST00000584966 Q8NDZ9 215 aa3.5□□□□□ -1.85
CDH8-213ENST00000584966 PLEKHB2Q96CS7 222 aa3.5□□□□□ -1.85
CDH8-213ENST00000584966 FAM218AQ96MZ4 157 aa3.5□□□□□ -1.85
CDH8-213ENST00000584966 LINC00474Q9P2X8 69 aa3.5□□□□□ -1.85
CDH8-213ENST00000584966 ERG28Q9UKR5 140 aa3.5□□□□□ -1.85
CDH8-213ENST00000584966 SMIM13P0DJ93 91 aa3.49□□□□□ -1.85
CDH8-213ENST00000584966 PFN2P35080 140 aa3.49□□□□□ -1.85
CDH8-213ENST00000584966 LINC01547P58512 204 aaPredicted RBP3.49□□□□□ -1.85
CDH8-213ENST00000584966 KRTAP10-5P60370 271 aa3.49□□□□□ -1.85
CDH8-213ENST00000584966 COX17Q14061 63 aa3.49□□□□□ -1.85
CDH8-213ENST00000584966 SFTA2Q6UW10 78 aa3.49□□□□□ -1.85
CDH8-213ENST00000584966 Q6ZVQ6 151 aa3.49□□□□□ -1.85
CDH8-213ENST00000584966 ATOH7Q8N100 152 aa3.49□□□□□ -1.85
CDH8-213ENST00000584966 TTTY13Q9BZ97 58 aa3.49□□□□□ -1.85
CDH8-213ENST00000584966 XAGE1AQ9HD64 81 aa3.49□□□□□ -1.85
CDH8-213ENST00000584966 NDUFA12Q9UI09 145 aa3.49□□□□□ -1.85
CDH8-213ENST00000584966 PKIGQ9Y2B9 76 aa3.49□□□□□ -1.85
CDH8-213ENST00000584966 LOC107984156A0A0G2JMH3 177 aa3.48□□□□□ -1.85
CDH8-213ENST00000584966 A0A0J9YXY3 114 aa3.48□□□□□ -1.85
CDH8-213ENST00000584966 MYMXA0A1B0GTQ4 84 aa3.48□□□□□ -1.85
CDH8-213ENST00000584966 NMUP48645 174 aa3.48□□□□□ -1.85
CDH8-213ENST00000584966 HERVK_113P61574 105 aa3.48□□□□□ -1.85
CDH8-213ENST00000584966 ADAMTSL4-AS1Q5T5F5 129 aa3.48□□□□□ -1.85
CDH8-213ENST00000584966 Q5VSD8 79 aa3.48□□□□□ -1.85
CDH8-213ENST00000584966 PHF5AQ7RTV0 110 aaKnown RBP3.48□□□□□ -1.85
CDH8-213ENST00000584966 ARL17AQ8IVW1 177 aa3.48□□□□□ -1.85
CDH8-213ENST00000584966 DPH3Q96FX2 82 aa3.48□□□□□ -1.85
CDH8-213ENST00000584966 PRAC1Q96KF2 57 aa3.48□□□□□ -1.85
CDH8-213ENST00000584966 LITAFQ99732 161 aa3.48□□□□□ -1.85
CDH8-213ENST00000584966 SND1-IT1Q9HBX3 110 aa3.48□□□□□ -1.85
CDH8-213ENST00000584966 FLG2Q5D862 2391 aaPredicted RBP3.48□□□□□ -1.85
CDH8-213ENST00000584966 HERC1Q15751 4861 aa3.47□□□□□ -1.85
CDH8-213ENST00000584966 C20orf202A1L168 122 aa3.47□□□□□ -1.85
CDH8-213ENST00000584966 HNRNPA3P51991 378 aaKnown RBP3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms